RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 C11orf45Q8TAV5 145 aa11.43□□□□□ -0.58
USHBP1-203ENST00000431146 IGLV10-54A0A075B6I4 117 aa11.42□□□□□ -0.58
USHBP1-203ENST00000431146 CFC1BP0CG36 223 aa11.42□□□□□ -0.58
USHBP1-203ENST00000431146 CFC1P0CG37 223 aa11.42□□□□□ -0.58
USHBP1-203ENST00000431146 LYPD5Q6UWN5 251 aa11.42□□□□□ -0.58
USHBP1-203ENST00000431146 SS18Q15532 418 aa11.42□□□□□ -0.58
USHBP1-203ENST00000431146 A0A087WZ39 114 aa11.41□□□□□ -0.58
USHBP1-203ENST00000431146 EIF4EBP3O60516 100 aaPredicted RBP11.41□□□□□ -0.58
USHBP1-203ENST00000431146 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
USHBP1-203ENST00000431146 DEFB131BA0A096LNP1 70 aa11.4□□□□□ -0.58
USHBP1-203ENST00000431146 REG3AQ06141 175 aa11.4□□□□□ -0.58
USHBP1-203ENST00000431146 MIAQ16674 131 aa11.4□□□□□ -0.58
USHBP1-203ENST00000431146 SFTA2Q6UW10 78 aa11.4□□□□□ -0.58
USHBP1-203ENST00000431146 SPANXDQ9BXN6 97 aa11.4□□□□□ -0.58
USHBP1-203ENST00000431146 SPANXCQ9NY87 97 aa11.4□□□□□ -0.58
USHBP1-203ENST00000431146 TM2D3Q9BRN9 247 aa11.39□□□□□ -0.59
USHBP1-203ENST00000431146 F8WDY8 70 aa11.38□□□□□ -0.59
USHBP1-203ENST00000431146 IFITM1P13164 125 aa11.38□□□□□ -0.59
USHBP1-203ENST00000431146 PPDPFLQ8WWR9 84 aa11.38□□□□□ -0.59
USHBP1-203ENST00000431146 COL7A1Q02388 2944 aa11.38□□□□□ -0.59
USHBP1-203ENST00000431146 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
USHBP1-203ENST00000431146 MEIG1Q5JSS6 88 aa11.38□□□□□ -0.59
USHBP1-203ENST00000431146 H3BNG1 76 aa11.37□□□□□ -0.59
USHBP1-203ENST00000431146 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
USHBP1-203ENST00000431146 KLK12Q9UKR0 248 aa11.37□□□□□ -0.59
USHBP1-203ENST00000431146 TIMM17BO60830 172 aa11.36□□□□□ -0.59
USHBP1-203ENST00000431146 GAGE2BQ13066 116 aa11.36□□□□□ -0.59
USHBP1-203ENST00000431146 CIRBPQ14011 172 aaKnown RBP11.36□□□□□ -0.59
USHBP1-203ENST00000431146 GAGE2EQ4V326 116 aa11.36□□□□□ -0.59
USHBP1-203ENST00000431146 WFDC10BQ8IUB3 73 aa11.36□□□□□ -0.59
USHBP1-203ENST00000431146 GAGE2DQ9UEU5 116 aa11.36□□□□□ -0.59
USHBP1-203ENST00000431146 TTC32Q5I0X7 151 aa11.35□□□□□ -0.59
USHBP1-203ENST00000431146 PRO1854Q9UHT4 67 aa11.35□□□□□ -0.59
USHBP1-203ENST00000431146 H7C2G1 150 aa11.34□□□□□ -0.59
USHBP1-203ENST00000431146 ESRGQ1W209 222 aa11.34□□□□□ -0.59
USHBP1-203ENST00000431146 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
USHBP1-203ENST00000431146 LOC107984156A0A0G2JMH3 177 aa11.32□□□□□ -0.6
USHBP1-203ENST00000431146 C6orf226Q5I0X4 101 aa11.32□□□□□ -0.6
USHBP1-203ENST00000431146 ARL17AQ8IVW1 177 aa11.32□□□□□ -0.6
USHBP1-203ENST00000431146 LINC00308Q8TCZ7 52 aa11.32□□□□□ -0.6
USHBP1-203ENST00000431146 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
USHBP1-203ENST00000431146 A0A0B4J2C4 111 aa11.32□□□□□ -0.6
USHBP1-203ENST00000431146 A0A1B0GX51 115 aa11.32□□□□□ -0.6
USHBP1-203ENST00000431146 COX7A2LO14548 114 aa11.32□□□□□ -0.6
USHBP1-203ENST00000431146 ENHOQ6UWT2 76 aa11.32□□□□□ -0.6
USHBP1-203ENST00000431146 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
USHBP1-203ENST00000431146 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
USHBP1-203ENST00000431146 TEN1Q86WV5 123 aa11.31□□□□□ -0.6
USHBP1-203ENST00000431146 OR13C6PQ8NH95 151 aa11.3□□□□□ -0.6
USHBP1-203ENST00000431146 PRR34Q9NV39 138 aa11.3□□□□□ -0.6
USHBP1-203ENST00000431146 DNAH9Q9NYC9 4486 aa11.3□□□□□ -0.6
USHBP1-203ENST00000431146 UBE2WQ96B02 151 aa11.3□□□□□ -0.6
USHBP1-203ENST00000431146 STAB2Q8WWQ8 2551 aa11.3□□□□□ -0.6
USHBP1-203ENST00000431146 J3KT08 172 aa11.29□□□□□ -0.6
USHBP1-203ENST00000431146 MALP21145 153 aa11.29□□□□□ -0.6
USHBP1-203ENST00000431146 SNCGO76070 127 aa11.29□□□□□ -0.6
USHBP1-203ENST00000431146 PFN2P35080 140 aa11.29□□□□□ -0.6
USHBP1-203ENST00000431146 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
USHBP1-203ENST00000431146 TRAV10A0A0B4J240 114 aa11.28□□□□□ -0.6
USHBP1-203ENST00000431146 Q8IZM0 81 aa11.28□□□□□ -0.6
USHBP1-203ENST00000431146 MIR7-3HGQ8N6C7 128 aa11.28□□□□□ -0.6
USHBP1-203ENST00000431146 TRBV20-1A0A075B6N2 111 aa11.27□□□□□ -0.6
USHBP1-203ENST00000431146 LINC00158P58513 81 aa11.27□□□□□ -0.6
USHBP1-203ENST00000431146 Q1RN00 199 aa11.27□□□□□ -0.6
USHBP1-203ENST00000431146 CRPP02741 224 aa11.27□□□□□ -0.61
USHBP1-203ENST00000431146 RPS28P62857 69 aaKnown RBP11.27□□□□□ -0.61
USHBP1-203ENST00000431146 CARD19Q96LW7 228 aa11.27□□□□□ -0.61
USHBP1-203ENST00000431146 KIAA0087Q14695 138 aa11.26□□□□□ -0.61
USHBP1-203ENST00000431146 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
USHBP1-203ENST00000431146 PSMB2P49721 201 aa11.25□□□□□ -0.61
USHBP1-203ENST00000431146 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
USHBP1-203ENST00000431146 FAM19A5Q7Z5A7 132 aaPredicted RBP11.24□□□□□ -0.61
USHBP1-203ENST00000431146 SCGB1C2P0DMR2 95 aa11.24□□□□□ -0.61
USHBP1-203ENST00000431146 IBA57-AS1B1ANH7 110 aa11.23□□□□□ -0.61
USHBP1-203ENST00000431146 RPL13AP40429 203 aaKnown RBP11.23□□□□□ -0.61
USHBP1-203ENST00000431146 C6orf223Q8N319 242 aa11.23□□□□□ -0.61
USHBP1-203ENST00000431146 LYSTQ99698 3801 aa11.22□□□□□ -0.61
USHBP1-203ENST00000431146 TCL1BO95988 128 aa11.22□□□□□ -0.61
USHBP1-203ENST00000431146 C9JAW5 83 aa11.21□□□□□ -0.61
USHBP1-203ENST00000431146 C9orf116Q5BN46 136 aaPredicted RBP11.21□□□□□ -0.61
USHBP1-203ENST00000431146 LYRM7Q5U5X0 104 aa11.21□□□□□ -0.61
USHBP1-203ENST00000431146 TRIAP1O43715 76 aa11.21□□□□□ -0.62
USHBP1-203ENST00000431146 COPS9Q8WXC6 57 aa11.21□□□□□ -0.62
USHBP1-203ENST00000431146 DNHD1Q96M86 4753 aa11.2□□□□□ -0.62
USHBP1-203ENST00000431146 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
USHBP1-203ENST00000431146 CCL18P55774 89 aa11.2□□□□□ -0.62
USHBP1-203ENST00000431146 SPAG11BQ08648 103 aa11.2□□□□□ -0.62
USHBP1-203ENST00000431146 C15orf53Q8NAA6 179 aa11.2□□□□□ -0.62
USHBP1-203ENST00000431146 LINC00588Q9Y4M8 146 aa11.2□□□□□ -0.62
USHBP1-203ENST00000431146 LINC01556Q5JQF7 62 aa11.19□□□□□ -0.62
USHBP1-203ENST00000431146 C10orf25Q5T742 122 aa11.18□□□□□ -0.62
USHBP1-203ENST00000431146 SND1-IT1Q9HBX3 110 aa11.18□□□□□ -0.62
USHBP1-203ENST00000431146 KLK5Q9Y337 293 aaPredicted RBP11.18□□□□□ -0.62
USHBP1-203ENST00000431146 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
USHBP1-203ENST00000431146 KRTAP26-1Q6PEX3 210 aa11.17□□□□□ -0.62
USHBP1-203ENST00000431146 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
USHBP1-203ENST00000431146 B9D2Q9BPU9 175 aa11.17□□□□□ -0.62
USHBP1-203ENST00000431146 CXCL5P42830 114 aa11.16□□□□□ -0.62
USHBP1-203ENST00000431146 Q9HAA7 133 aa11.16□□□□□ -0.62
USHBP1-203ENST00000431146 PRKDCP78527 4128 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms