RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 PRB3Q04118 309 aaPredicted RBP2.63□□□□□ -1.99
HMGB3-203ENST00000430118 C2orf83Q53S99 150 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 MINOS1Q5TGZ0 78 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 ARL17AQ8IVW1 177 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 OR8A1Q8NGG7 326 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 ZNF799Q96GE5 643 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 METTL26Q96S19 204 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 TMEM243Q9BU79 118 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 MINOS1-NBL1R4GNA1 71 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 KMT2AQ03164 3969 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 TRAV12-1A0A0B4J245 112 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 IGKV1-9A0A0C4DH69 117 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 TRBV30A0A0K0K1B3 111 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 TRBV6-1A0A0K0K1D8 114 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 H3BVH4 76 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 J3QT63 122 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 IGKV1-5P01602 117 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 RBMY1FQ15415 496 aaKnown RBP2.62□□□□□ -1.99
HMGB3-203ENST00000430118 ZNF56Q15929 161 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 ZFP2Q6ZN57 461 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 NTM-AS1Q6ZSK4 140 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 DAND5Q8N907 189 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 C4orf3Q8WVX3 66 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 SPTSSAQ969W0 71 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 DAZ1Q9NQZ3 744 aaKnown RBP2.62□□□□□ -1.99
HMGB3-203ENST00000430118 OTORQ9NRC9 128 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 ZNF355PQ9NSJ1 428 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 UBR4Q5T4S7 5183 aa2.62□□□□□ -1.99
HMGB3-203ENST00000430118 IGLV4-69A0A075B6H9 119 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.61□□□□□ -1.99
HMGB3-203ENST00000430118 IGHV7-4-1A0A0J9YVY3 117 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 A0A1B0GUT8 65 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 TMEM223A0PJW6 202 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 ODF3BA8MYP8 253 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 H3BSH0 61 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 M0R135 149 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 IGKV1-39P01597 117 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 IGKV1D-39P04432 117 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 RPS27P42677 84 aaKnown RBP2.61□□□□□ -1.99
HMGB3-203ENST00000430118 C6orf99Q4VX62 202 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 Q6JHZ5 121 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 LINC00596Q86U02 117 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 RNF182Q8N6D2 247 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 Q8N8P6 123 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 BRK1Q8WUW1 75 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 SRSF12Q8WXF0 261 aaKnown RBP2.61□□□□□ -1.99
HMGB3-203ENST00000430118 GAFA1Q96PS6 74 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 PRO1854Q9UHT4 67 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 DNAH11Q96DT5 4516 aa2.61□□□□□ -1.99
HMGB3-203ENST00000430118 HERC1Q15751 4861 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 VPS13DQ5THJ4 4388 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 IGKV1-27A0A075B6S5 117 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 TMSB15BA0A087X1C1 80 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 IGHV6-1A0A0B4J1U7 121 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 IGHV3-72A0A0B4J1Y9 119 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 IGKV1D-43A0A0B4J1Z2 117 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 TEX49A0A1B0GTD5 131 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 NDUFC1O43677 76 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 FCER1GP30273 86 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 IFI27P40305 119 aaPredicted RBP2.6□□□□□ -1.99
HMGB3-203ENST00000430118 EDDM3BP56851 147 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 DEFB136Q30KP8 78 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 FAM222AQ5U5X8 452 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 ATP5EP2Q5VTU8 51 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 HCP5Q6MZN7 132 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 C2orf82Q6UX34 121 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 ZNF826PQ6ZT77 177 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 FP248Q71RG6 208 aaPredicted RBP2.6□□□□□ -1.99
HMGB3-203ENST00000430118 ORMDL3Q8N138 153 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 FMC1Q96HJ9 113 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 ZNF714Q96N38 554 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 CHCHD7Q9BUK0 85 aa2.6□□□□□ -1.99
HMGB3-203ENST00000430118 DYNC1H1Q14204 4646 aaKnown RBP2.6□□□□□ -1.99
HMGB3-203ENST00000430118 PKHD1P08F94 4074 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 TRBV7-1A0A0A6YYK4 115 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 IGHV1-58A0A0C4DH39 117 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 C17orf98A8MV24 154 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 F8VRH5 84 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 IGHV3-33P01772 117 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 INAFM2P0DMQ5 153 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 KRTAP10-12P60413 245 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 SYCNQ0VAF6 134 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 ZNF816Q0VGE8 651 aaPredicted RBP2.59□□□□□ -1.99
HMGB3-203ENST00000430118 KLKP1Q107X0 134 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 DEFB116Q30KQ4 102 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 C10orf99Q6UWK7 81 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 LINC00305Q7Z4B0 112 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 WDR86Q86TI4 376 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 SPACA5Q96QH8 159 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 CYSTM1Q9H1C7 97 aa2.59□□□□□ -1.99
HMGB3-203ENST00000430118 FAT2Q9NYQ8 4349 aa2.59□□□□□ -2
HMGB3-203ENST00000430118 DNAH2Q9P225 4427 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 TRAV3A0A0B4J244 114 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 A0A0J9YY99 117 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 H7BZZ5 65 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 K7EMI3 77 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 NDUFS5O43920 106 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 IGHV3-30P01768 117 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 TCRAP04437 139 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 COX6CP09669 75 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms