RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 XCL1P47992 114 aa5.8□□□□□ -1.48
HPS4-205ENST00000429411 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.8□□□□□ -1.48
HPS4-205ENST00000429411 PRR26Q8N8Z3 221 aa5.8□□□□□ -1.48
HPS4-205ENST00000429411 DNAJC9-AS1A6NH13 148 aa5.8□□□□□ -1.48
HPS4-205ENST00000429411 C4orf3Q8WVX3 66 aa5.8□□□□□ -1.48
HPS4-205ENST00000429411 KRTAP1-1Q07627 177 aa5.8□□□□□ -1.48
HPS4-205ENST00000429411 PYGO1Q9Y3Y4 419 aa5.8□□□□□ -1.48
HPS4-205ENST00000429411 LINC00308Q8TCZ7 52 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 TGP01266 2768 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 IGLV10-54A0A075B6I4 117 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 A0A1B0GX51 115 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 LINC00242Q5T6M2 205 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 MIR7-3HGQ8N6C7 128 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 SPANXCQ9NY87 97 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 H7C423 109 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 C1orf158Q8N1D5 194 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 LINC00482Q8N8I6 264 aa5.79□□□□□ -1.48
HPS4-205ENST00000429411 VWFP04275 2813 aa5.78□□□□□ -1.48
HPS4-205ENST00000429411 PKD1L1Q8TDX9 2849 aa5.78□□□□□ -1.48
HPS4-205ENST00000429411 ATP5G1P05496 136 aa5.78□□□□□ -1.48
HPS4-205ENST00000429411 BAALC-AS2P0C853 105 aa5.78□□□□□ -1.48
HPS4-205ENST00000429411 KLK5Q9Y337 293 aaPredicted RBP5.78□□□□□ -1.48
HPS4-205ENST00000429411 TRBV30A0A0K0K1B3 111 aa5.78□□□□□ -1.48
HPS4-205ENST00000429411 APOC4P55056 127 aa5.78□□□□□ -1.48
HPS4-205ENST00000429411 KRTAP24-1Q3LI83 254 aa5.78□□□□□ -1.48
HPS4-205ENST00000429411 CR1P17927 2039 aa5.77□□□□□ -1.49
HPS4-205ENST00000429411 CD164L2Q6UWJ8 174 aa5.77□□□□□ -1.49
HPS4-205ENST00000429411 COPS9Q8WXC6 57 aa5.77□□□□□ -1.49
HPS4-205ENST00000429411 SND1-IT1Q9HBX3 110 aa5.77□□□□□ -1.49
HPS4-205ENST00000429411 A0A096LNT2 108 aa5.77□□□□□ -1.49
HPS4-205ENST00000429411 NDUFC2O95298 119 aa5.77□□□□□ -1.49
HPS4-205ENST00000429411 C11orf72Q8NBR9 251 aa5.76□□□□□ -1.49
HPS4-205ENST00000429411 DAZ2Q13117 558 aaKnown RBP5.76□□□□□ -1.49
HPS4-205ENST00000429411 DAZ4Q86SG3 579 aaKnown RBP5.76□□□□□ -1.49
HPS4-205ENST00000429411 Q8N2B8 174 aa5.76□□□□□ -1.49
HPS4-205ENST00000429411 DAZ3Q9NR90 486 aaKnown RBP5.76□□□□□ -1.49
HPS4-205ENST00000429411 NDUFA1O15239 70 aa5.76□□□□□ -1.49
HPS4-205ENST00000429411 SMIM1B2RUZ4 78 aa5.75□□□□□ -1.49
HPS4-205ENST00000429411 PRB2P02812 416 aaPredicted RBP5.75□□□□□ -1.49
HPS4-205ENST00000429411 GYPEP15421 78 aa5.75□□□□□ -1.49
HPS4-205ENST00000429411 RPS28P62857 69 aaKnown RBP5.75□□□□□ -1.49
HPS4-205ENST00000429411 NTM-AS1Q6ZSK4 140 aa5.75□□□□□ -1.49
HPS4-205ENST00000429411 COX7B2Q8TF08 81 aa5.75□□□□□ -1.49
HPS4-205ENST00000429411 SPANXDQ9BXN6 97 aa5.75□□□□□ -1.49
HPS4-205ENST00000429411 LST1O00453 97 aa5.75□□□□□ -1.49
HPS4-205ENST00000429411 SLPIP03973 132 aa5.75□□□□□ -1.49
HPS4-205ENST00000429411 LITAFQ99732 161 aa5.75□□□□□ -1.49
HPS4-205ENST00000429411 H3BT86 120 aa5.74□□□□□ -1.49
HPS4-205ENST00000429411 IGLV4-60A0A075B6I1 120 aa5.74□□□□□ -1.49
HPS4-205ENST00000429411 SBSPONQ8IVN8 264 aa5.74□□□□□ -1.49
HPS4-205ENST00000429411 INAFM2P0DMQ5 153 aa5.73□□□□□ -1.49
HPS4-205ENST00000429411 CDC42SE2Q9NRR3 84 aa5.73□□□□□ -1.49
HPS4-205ENST00000429411 COX7A2LO14548 114 aa5.73□□□□□ -1.49
HPS4-205ENST00000429411 LECT2O14960 151 aa5.73□□□□□ -1.49
HPS4-205ENST00000429411 SOSTDC1Q6X4U4 206 aa5.73□□□□□ -1.49
HPS4-205ENST00000429411 ANGP03950 147 aaKnown RBP5.73□□□□□ -1.49
HPS4-205ENST00000429411 LINC01006Q8NI28 216 aa5.73□□□□□ -1.49
HPS4-205ENST00000429411 TRRAPQ9Y4A5 3859 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 IGKV3D-7A0A0C4DH55 119 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 TRBV10-1A0A0K0K1A3 114 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 C16orf74Q96GX8 76 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 GHRHP01286 108 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 HIST1H4AP62805 103 aaKnown RBP5.72□□□□□ -1.49
HPS4-205ENST00000429411 FAM104AQ969W3 186 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 LINC00526Q96FQ7 95 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 C14orf132Q9NPU4 83 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 SS18Q15532 418 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 DEFB135Q30KP9 77 aa5.72□□□□□ -1.49
HPS4-205ENST00000429411 TRAV13-2A0A0B4J235 113 aa5.71□□□□□ -1.49
HPS4-205ENST00000429411 BEAN1Q3B7T3 259 aa5.71□□□□□ -1.5
HPS4-205ENST00000429411 Q5XG85 94 aa5.71□□□□□ -1.5
HPS4-205ENST00000429411 HILS1P60008 231 aa5.71□□□□□ -1.5
HPS4-205ENST00000429411 PRR3P79522 188 aaKnown RBP5.71□□□□□ -1.5
HPS4-205ENST00000429411 S100A7L2Q5SY68 101 aa5.7□□□□□ -1.5
HPS4-205ENST00000429411 TRBV6-8A0A0A6YYG3 113 aa5.7□□□□□ -1.5
HPS4-205ENST00000429411 DSCR8Q96T75 97 aa5.7□□□□□ -1.5
HPS4-205ENST00000429411 FAM218AQ96MZ4 157 aa5.69□□□□□ -1.5
HPS4-205ENST00000429411 NCR3O14931 201 aa5.69□□□□□ -1.5
HPS4-205ENST00000429411 LINC00269Q8N2A0 174 aa5.69□□□□□ -1.5
HPS4-205ENST00000429411 SMIM11BQ8TCY0 68 aa5.69□□□□□ -1.5
HPS4-205ENST00000429411 TIMM17BO60830 172 aa5.68□□□□□ -1.5
HPS4-205ENST00000429411 CCL18P55774 89 aa5.68□□□□□ -1.5
HPS4-205ENST00000429411 SDIM1Q6ZPB5 146 aa5.68□□□□□ -1.5
HPS4-205ENST00000429411 FAM222AQ5U5X8 452 aa5.68□□□□□ -1.5
HPS4-205ENST00000429411 LINC00337Q8N6G1 96 aa5.68□□□□□ -1.5
HPS4-205ENST00000429411 CMC4P56277 68 aaPredicted RBP5.68□□□□□ -1.5
HPS4-205ENST00000429411 DAD1P61803 113 aa5.68□□□□□ -1.5
HPS4-205ENST00000429411 C9orf116Q5BN46 136 aaPredicted RBP5.68□□□□□ -1.5
HPS4-205ENST00000429411 A0A087WYN8 130 aa5.67□□□□□ -1.5
HPS4-205ENST00000429411 DEFB121Q5J5C9 76 aa5.67□□□□□ -1.5
HPS4-205ENST00000429411 C3orf22Q8N5N4 141 aa5.67□□□□□ -1.5
HPS4-205ENST00000429411 IGLV5-39A0A0G2JS06 123 aa5.67□□□□□ -1.5
HPS4-205ENST00000429411 TRBV6-4A0A1B0GX49 114 aa5.67□□□□□ -1.5
HPS4-205ENST00000429411 FSHBP01225 129 aa5.67□□□□□ -1.5
HPS4-205ENST00000429411 LAMTOR3Q9UHA4 124 aa5.67□□□□□ -1.5
HPS4-205ENST00000429411 DNHD1Q96M86 4753 aa5.66□□□□□ -1.5
HPS4-205ENST00000429411 Q8N3U1 123 aa5.66□□□□□ -1.5
HPS4-205ENST00000429411 LINC00959A0A1B0GUT2 108 aa5.66□□□□□ -1.5
HPS4-205ENST00000429411 UQCRQO14949 82 aa5.66□□□□□ -1.5
HPS4-205ENST00000429411 TRBV7-7A0A0K0K1E9 115 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms