RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GIG44P09565 113 aaPredicted RBP8.76□□□□□ -1.01
CDH3-202ENST00000429102 TRAV23DV6A0A075B6W5 121 aa8.76□□□□□ -1.01
CDH3-202ENST00000429102 TRBV10-1A0A0K0K1A3 114 aa8.76□□□□□ -1.01
CDH3-202ENST00000429102 M0QXV9 152 aa8.76□□□□□ -1.01
CDH3-202ENST00000429102 SMR3AQ99954 134 aa8.76□□□□□ -1.01
CDH3-202ENST00000429102 TRBV6-8A0A0A6YYG3 113 aa8.75□□□□□ -1.01
CDH3-202ENST00000429102 SVIPQ8NHG7 77 aa8.75□□□□□ -1.01
CDH3-202ENST00000429102 LINC00269Q8N2A0 174 aa8.74□□□□□ -1.01
CDH3-202ENST00000429102 RNF152Q8N8N0 203 aa8.74□□□□□ -1.01
CDH3-202ENST00000429102 ANGP03950 147 aaKnown RBP8.74□□□□□ -1.01
CDH3-202ENST00000429102 LINC01006Q8NI28 216 aa8.74□□□□□ -1.01
CDH3-202ENST00000429102 LINC00846Q9NV44 126 aa8.74□□□□□ -1.01
CDH3-202ENST00000429102 LAMTOR3Q9UHA4 124 aa8.74□□□□□ -1.01
CDH3-202ENST00000429102 TENM1Q9UKZ4 2725 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 TRACP01848 142 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 C3orf22Q8N5N4 141 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 PF4P02776 101 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 CXCL5P42830 114 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 HILS1P60008 231 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 HAMPP81172 84 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 Q6Q795 121 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 TMEM126AQ9H061 195 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 C22orf24Q9Y442 160 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 TENM4Q6N022 2769 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 S100A7L2Q5SY68 101 aa8.73□□□□□ -1.01
CDH3-202ENST00000429102 LINC00959A0A1B0GUT2 108 aa8.72□□□□□ -1.01
CDH3-202ENST00000429102 FHL2Q14192 279 aa8.72□□□□□ -1.01
CDH3-202ENST00000429102 C16orf74Q96GX8 76 aa8.72□□□□□ -1.01
CDH3-202ENST00000429102 DSCR8Q96T75 97 aa8.72□□□□□ -1.01
CDH3-202ENST00000429102 TMEM86BQ8N661 226 aa8.72□□□□□ -1.01
CDH3-202ENST00000429102 IGHV3OR16-9A0A0B4J2B5 98 aa8.72□□□□□ -1.01
CDH3-202ENST00000429102 ACYP1P07311 99 aa8.71□□□□□ -1.01
CDH3-202ENST00000429102 FAM240AA0A1B0GVK7 77 aa8.71□□□□□ -1.02
CDH3-202ENST00000429102 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.02
CDH3-202ENST00000429102 FSHBP01225 129 aa8.71□□□□□ -1.02
CDH3-202ENST00000429102 DEFB135Q30KP9 77 aa8.71□□□□□ -1.02
CDH3-202ENST00000429102 LRRC75A-AS1Q8N1F1 130 aa8.71□□□□□ -1.02
CDH3-202ENST00000429102 KMT2BQ9UMN6 2715 aaPredicted RBP8.7□□□□□ -1.02
CDH3-202ENST00000429102 RPL28P46779 137 aaKnown RBP8.7□□□□□ -1.02
CDH3-202ENST00000429102 SS18Q15532 418 aa8.7□□□□□ -1.02
CDH3-202ENST00000429102 KIR2DL5BQ8NHK3 375 aa8.7□□□□□ -1.02
CDH3-202ENST00000429102 FLNBO75369 2602 aaKnown RBP8.7□□□□□ -1.02
CDH3-202ENST00000429102 PKD1L1Q8TDX9 2849 aa8.7□□□□□ -1.02
CDH3-202ENST00000429102 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
CDH3-202ENST00000429102 TRBV7-7A0A0K0K1E9 115 aa8.69□□□□□ -1.02
CDH3-202ENST00000429102 UQCRQO14949 82 aa8.69□□□□□ -1.02
CDH3-202ENST00000429102 C6orf223Q8N319 242 aa8.69□□□□□ -1.02
CDH3-202ENST00000429102 CSDC2Q9Y534 153 aaKnown RBP8.69□□□□□ -1.02
CDH3-202ENST00000429102 TRRAPQ9Y4A5 3859 aa8.69□□□□□ -1.02
CDH3-202ENST00000429102 ENHOQ6UWT2 76 aa8.68□□□□□ -1.02
CDH3-202ENST00000429102 TRBV6-4A0A1B0GX49 114 aa8.68□□□□□ -1.02
CDH3-202ENST00000429102 ORMDL1Q9P0S3 153 aa8.68□□□□□ -1.02
CDH3-202ENST00000429102 DEFB121Q5J5C9 76 aa8.68□□□□□ -1.02
CDH3-202ENST00000429102 FAM222AQ5U5X8 452 aa8.68□□□□□ -1.02
CDH3-202ENST00000429102 SPATA3Q8NHX4 192 aa8.68□□□□□ -1.02
CDH3-202ENST00000429102 CYSTM1Q9H1C7 97 aa8.67□□□□□ -1.02
CDH3-202ENST00000429102 ZNF843Q8N446 348 aa8.67□□□□□ -1.02
CDH3-202ENST00000429102 FAM110AQ9BQ89 295 aa8.67□□□□□ -1.02
CDH3-202ENST00000429102 C6orf99Q4VX62 202 aa8.67□□□□□ -1.02
CDH3-202ENST00000429102 FAM19A1Q7Z5A9 133 aa8.66□□□□□ -1.02
CDH3-202ENST00000429102 A0A087WZ39 114 aa8.66□□□□□ -1.02
CDH3-202ENST00000429102 C20orf197Q8N268 126 aa8.66□□□□□ -1.02
CDH3-202ENST00000429102 XAGE1AQ9HD64 81 aa8.66□□□□□ -1.02
CDH3-202ENST00000429102 NOTCH1P46531 2555 aa8.65□□□□□ -1.02
CDH3-202ENST00000429102 TRAV25A0A0B4J276 109 aa8.65□□□□□ -1.02
CDH3-202ENST00000429102 IBA57-AS1B1ANH7 110 aa8.65□□□□□ -1.02
CDH3-202ENST00000429102 USP17L23D6RBM5 183 aa8.65□□□□□ -1.02
CDH3-202ENST00000429102 COX7CP15954 63 aa8.65□□□□□ -1.02
CDH3-202ENST00000429102 OTOGQ6ZRI0 2925 aa8.65□□□□□ -1.03
CDH3-202ENST00000429102 ATOX1O00244 68 aa8.65□□□□□ -1.03
CDH3-202ENST00000429102 GHRHP01286 108 aa8.65□□□□□ -1.03
CDH3-202ENST00000429102 IL17DQ8TAD2 202 aa8.65□□□□□ -1.03
CDH3-202ENST00000429102 RPL18AQ02543 176 aaKnown RBP8.64□□□□□ -1.03
CDH3-202ENST00000429102 H0YGX0 51 aa8.64□□□□□ -1.03
CDH3-202ENST00000429102 FAM19A5Q7Z5A7 132 aaPredicted RBP8.63□□□□□ -1.03
CDH3-202ENST00000429102 CHCHD10Q8WYQ3 142 aaPredicted RBP8.63□□□□□ -1.03
CDH3-202ENST00000429102 BAHCC1Q9P281 2608 aa8.63□□□□□ -1.03
CDH3-202ENST00000429102 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
CDH3-202ENST00000429102 IGLV1-51P01701 117 aa8.63□□□□□ -1.03
CDH3-202ENST00000429102 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
CDH3-202ENST00000429102 KLK12Q9UKR0 248 aa8.63□□□□□ -1.03
CDH3-202ENST00000429102 CSNK1G2-AS1Q8NCQ2 148 aa8.62□□□□□ -1.03
CDH3-202ENST00000429102 C19orf73Q9NVV2 129 aa8.62□□□□□ -1.03
CDH3-202ENST00000429102 J3KT08 172 aa8.61□□□□□ -1.03
CDH3-202ENST00000429102 MAST4O15021 2626 aa8.61□□□□□ -1.03
CDH3-202ENST00000429102 NBEAL1Q6ZS30 2694 aa8.61□□□□□ -1.03
CDH3-202ENST00000429102 KRTAP1-3Q8IUG1 177 aa8.61□□□□□ -1.03
CDH3-202ENST00000429102 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
CDH3-202ENST00000429102 SNURFQ9Y675 71 aa8.61□□□□□ -1.03
CDH3-202ENST00000429102 REG3AQ06141 175 aa8.6□□□□□ -1.03
CDH3-202ENST00000429102 Q8NDZ9 215 aa8.6□□□□□ -1.03
CDH3-202ENST00000429102 LINC01600Q96MT4 127 aa8.6□□□□□ -1.03
CDH3-202ENST00000429102 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
CDH3-202ENST00000429102 DAD1P61803 113 aa8.59□□□□□ -1.03
CDH3-202ENST00000429102 HIGD2BQ4VC39 106 aa8.59□□□□□ -1.03
CDH3-202ENST00000429102 IMUPQ9GZP8 106 aa8.59□□□□□ -1.03
CDH3-202ENST00000429102 FBN1P35555 2871 aaKnown RBP8.59□□□□□ -1.03
CDH3-202ENST00000429102 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.04
CDH3-202ENST00000429102 M0R2N4 97 aa8.58□□□□□ -1.04
CDH3-202ENST00000429102 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms