RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CTDSP1Q9GZU7 261 aa9.25□□□□□ -0.93
SEC13-210ENST00000428626 ZNF861PO60384 105 aa9.24□□□□□ -0.93
SEC13-210ENST00000428626 ADCYAP1P18509 176 aa9.24□□□□□ -0.93
SEC13-210ENST00000428626 HERVK_113P63121 156 aa9.24□□□□□ -0.93
SEC13-210ENST00000428626 TIMM17AQ99595 171 aa9.24□□□□□ -0.93
SEC13-210ENST00000428626 SMIM1B2RUZ4 78 aa9.22□□□□□ -0.93
SEC13-210ENST00000428626 F8VRH5 84 aa9.22□□□□□ -0.93
SEC13-210ENST00000428626 GEMIN7Q9H840 131 aaKnown RBP9.21□□□□□ -0.94
SEC13-210ENST00000428626 SEC11AP67812 179 aa9.2□□□□□ -0.94
SEC13-210ENST00000428626 ERASQ7Z444 233 aa9.2□□□□□ -0.94
SEC13-210ENST00000428626 IGLV5-45A0A087WSX0 123 aa9.19□□□□□ -0.94
SEC13-210ENST00000428626 A0A087X002 238 aa9.19□□□□□ -0.94
SEC13-210ENST00000428626 NUPR1O60356 82 aa9.19□□□□□ -0.94
SEC13-210ENST00000428626 RAB14P61106 215 aa9.19□□□□□ -0.94
SEC13-210ENST00000428626 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
SEC13-210ENST00000428626 MRPL55Q7Z7F7 128 aaKnown RBP9.19□□□□□ -0.94
SEC13-210ENST00000428626 SCGB3A1Q96QR1 104 aa9.19□□□□□ -0.94
SEC13-210ENST00000428626 TP73-AS1Q9UF72 201 aa9.19□□□□□ -0.94
SEC13-210ENST00000428626 CARHSP1Q9Y2V2 147 aaKnown RBP9.19□□□□□ -0.94
SEC13-210ENST00000428626 MUC2Q02817 5179 aa9.19□□□□□ -0.94
SEC13-210ENST00000428626 LINC01546A6NGU7 62 aa9.18□□□□□ -0.94
SEC13-210ENST00000428626 RPL13AP40429 203 aaKnown RBP9.18□□□□□ -0.94
SEC13-210ENST00000428626 LBHQ53QV2 105 aaPredicted RBP9.18□□□□□ -0.94
SEC13-210ENST00000428626 CLLU1Q5K131 121 aa9.18□□□□□ -0.94
SEC13-210ENST00000428626 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
SEC13-210ENST00000428626 CXCL5P42830 114 aa9.17□□□□□ -0.94
SEC13-210ENST00000428626 PRR4Q16378 134 aa9.17□□□□□ -0.94
SEC13-210ENST00000428626 PDZD11Q5EBL8 140 aa9.17□□□□□ -0.94
SEC13-210ENST00000428626 COX7B2Q8TF08 81 aa9.17□□□□□ -0.94
SEC13-210ENST00000428626 LINC00167Q96N53 147 aa9.17□□□□□ -0.94
SEC13-210ENST00000428626 RPL37AP8A6NKH3 93 aa9.16□□□□□ -0.94
SEC13-210ENST00000428626 BCE1O60756 84 aa9.16□□□□□ -0.94
SEC13-210ENST00000428626 SPINK8P0C7L1 97 aa9.16□□□□□ -0.94
SEC13-210ENST00000428626 G0S2P27469 103 aa9.16□□□□□ -0.94
SEC13-210ENST00000428626 CST9LQ9H4G1 147 aa9.16□□□□□ -0.94
SEC13-210ENST00000428626 TMEM218A2RU14 115 aa9.15□□□□□ -0.94
SEC13-210ENST00000428626 GAGE10A6NGK3 116 aa9.15□□□□□ -0.94
SEC13-210ENST00000428626 TRAV9-1A0A075B6T8 112 aa9.14□□□□□ -0.95
SEC13-210ENST00000428626 TSPAN13O95857 204 aa9.14□□□□□ -0.95
SEC13-210ENST00000428626 RAB5BP61020 215 aa9.14□□□□□ -0.95
SEC13-210ENST00000428626 IFITM2Q01629 132 aa9.14□□□□□ -0.95
SEC13-210ENST00000428626 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
SEC13-210ENST00000428626 SCO1O75880 301 aa9.13□□□□□ -0.95
SEC13-210ENST00000428626 KRTAP13-1Q8IUC0 172 aa9.13□□□□□ -0.95
SEC13-210ENST00000428626 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
SEC13-210ENST00000428626 IGLV5-37A0A075B6J1 123 aa9.12□□□□□ -0.95
SEC13-210ENST00000428626 RPL28P46779 137 aaKnown RBP9.12□□□□□ -0.95
SEC13-210ENST00000428626 A0A096LNJ9 63 aa9.11□□□□□ -0.95
SEC13-210ENST00000428626 PMVKQ15126 192 aa9.11□□□□□ -0.95
SEC13-210ENST00000428626 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
SEC13-210ENST00000428626 UQCC3Q6UW78 93 aa9.11□□□□□ -0.95
SEC13-210ENST00000428626 URB1-AS1Q96HZ7 61 aa9.09□□□□□ -0.95
SEC13-210ENST00000428626 SEC11CQ9BY50 192 aa9.09□□□□□ -0.95
SEC13-210ENST00000428626 MRPL18Q9H0U6 180 aaKnown RBP9.09□□□□□ -0.95
SEC13-210ENST00000428626 IGLV5-39A0A0G2JS06 123 aa9.08□□□□□ -0.96
SEC13-210ENST00000428626 CRYGAP11844 174 aa9.08□□□□□ -0.96
SEC13-210ENST00000428626 FA2HQ7L5A8 372 aa9.08□□□□□ -0.96
SEC13-210ENST00000428626 TYMSOSQ8TAI1 123 aa9.08□□□□□ -0.96
SEC13-210ENST00000428626 IGKV2-28A0A075B6P5 120 aa9.07□□□□□ -0.96
SEC13-210ENST00000428626 LINC01549A6NIU2 74 aa9.07□□□□□ -0.96
SEC13-210ENST00000428626 IGKV2D-28P01615 120 aa9.07□□□□□ -0.96
SEC13-210ENST00000428626 IGLC3P0DOY3 106 aa9.07□□□□□ -0.96
SEC13-210ENST00000428626 S100PP25815 95 aa9.07□□□□□ -0.96
SEC13-210ENST00000428626 FABP9Q0Z7S8 132 aa9.07□□□□□ -0.96
SEC13-210ENST00000428626 Q8NDZ9 215 aa9.07□□□□□ -0.96
SEC13-210ENST00000428626 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
SEC13-210ENST00000428626 PFN2P35080 140 aa9.06□□□□□ -0.96
SEC13-210ENST00000428626 NKAPP1Q8N9T2 125 aa9.06□□□□□ -0.96
SEC13-210ENST00000428626 ATP5LO75964 103 aa9.05□□□□□ -0.96
SEC13-210ENST00000428626 VPREB1P12018 145 aa9.05□□□□□ -0.96
SEC13-210ENST00000428626 SMCO4Q9NRQ5 59 aa9.05□□□□□ -0.96
SEC13-210ENST00000428626 H3BRM9 83 aa9.04□□□□□ -0.96
SEC13-210ENST00000428626 UBE2AP49459 152 aa9.04□□□□□ -0.96
SEC13-210ENST00000428626 PRLHP81277 87 aa9.04□□□□□ -0.96
SEC13-210ENST00000428626 C10orf91Q5T1B1 145 aa9.04□□□□□ -0.96
SEC13-210ENST00000428626 SND1-IT1Q9HBX3 110 aa9.04□□□□□ -0.96
SEC13-210ENST00000428626 TMEM238C9JI98 176 aa9.03□□□□□ -0.96
SEC13-210ENST00000428626 PMCHL1Q16048 86 aa9.03□□□□□ -0.96
SEC13-210ENST00000428626 COX19Q49B96 90 aa9.03□□□□□ -0.96
SEC13-210ENST00000428626 C18orf32Q8TCD1 76 aa9.03□□□□□ -0.96
SEC13-210ENST00000428626 NDUFA6P56556 154 aa9.02□□□□□ -0.97
SEC13-210ENST00000428626 COMMD7Q86VX2 200 aa9.02□□□□□ -0.97
SEC13-210ENST00000428626 ZNF625Q96I27 306 aaPredicted RBP9.02□□□□□ -0.97
SEC13-210ENST00000428626 RETNLBQ9BQ08 111 aa9.02□□□□□ -0.97
SEC13-210ENST00000428626 ERG28Q9UKR5 140 aa9.02□□□□□ -0.97
SEC13-210ENST00000428626 C11orf86A6NJI1 115 aa9.01□□□□□ -0.97
SEC13-210ENST00000428626 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
SEC13-210ENST00000428626 RPS10P5Q9NQ39 176 aa9.01□□□□□ -0.97
SEC13-210ENST00000428626 M0R378 163 aa9□□□□□ -0.97
SEC13-210ENST00000428626 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
SEC13-210ENST00000428626 LINC00614P0C842 121 aa8.99□□□□□ -0.97
SEC13-210ENST00000428626 FAM19A1Q7Z5A9 133 aa8.99□□□□□ -0.97
SEC13-210ENST00000428626 FAT4Q6V0I7 4981 aa8.99□□□□□ -0.97
SEC13-210ENST00000428626 HBDP02042 147 aa8.98□□□□□ -0.97
SEC13-210ENST00000428626 RHEBQ15382 184 aa8.98□□□□□ -0.97
SEC13-210ENST00000428626 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
SEC13-210ENST00000428626 TRAPPC1Q9Y5R8 145 aa8.98□□□□□ -0.97
SEC13-210ENST00000428626 MUC17Q685J3 4493 aa8.97□□□□□ -0.97
SEC13-210ENST00000428626 COX17Q14061 63 aa8.96□□□□□ -0.98
SEC13-210ENST00000428626 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 236.8 ms