RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ZNF861PO60384 105 aa9.82□□□□□ -0.84
VARS-216ENST00000428445 HERVK_113P63121 156 aa9.82□□□□□ -0.84
VARS-216ENST00000428445 NXT2Q9NPJ8 142 aaKnown RBP9.82□□□□□ -0.84
VARS-216ENST00000428445 LINC00173Q6ZV60 143 aa9.81□□□□□ -0.84
VARS-216ENST00000428445 TOMM7Q9P0U1 55 aa9.81□□□□□ -0.84
VARS-216ENST00000428445 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
VARS-216ENST00000428445 A0A1B0GVG6 124 aa9.8□□□□□ -0.84
VARS-216ENST00000428445 ALKBH7Q9BT30 221 aaPredicted RBP9.8□□□□□ -0.84
VARS-216ENST00000428445 XAGE1AQ9HD64 81 aa9.8□□□□□ -0.84
VARS-216ENST00000428445 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
VARS-216ENST00000428445 CTDSP1Q9GZU7 261 aa9.79□□□□□ -0.84
VARS-216ENST00000428445 TP73-AS1Q9UF72 201 aa9.79□□□□□ -0.84
VARS-216ENST00000428445 A0A087X002 238 aa9.78□□□□□ -0.84
VARS-216ENST00000428445 LINC01549A6NIU2 74 aa9.78□□□□□ -0.84
VARS-216ENST00000428445 F8VRH5 84 aa9.78□□□□□ -0.84
VARS-216ENST00000428445 CXCL5P42830 114 aa9.78□□□□□ -0.84
VARS-216ENST00000428445 ANAPC11Q9NYG5 84 aa9.77□□□□□ -0.85
VARS-216ENST00000428445 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
VARS-216ENST00000428445 KRTAP9-2Q9BYQ4 174 aa9.76□□□□□ -0.85
VARS-216ENST00000428445 GEMIN7Q9H840 131 aaKnown RBP9.76□□□□□ -0.85
VARS-216ENST00000428445 CDKN2A-AS1Q9UH64 79 aa9.76□□□□□ -0.85
VARS-216ENST00000428445 ERASQ7Z444 233 aa9.75□□□□□ -0.85
VARS-216ENST00000428445 RAB14P61106 215 aa9.74□□□□□ -0.85
VARS-216ENST00000428445 RPL37AP8A6NKH3 93 aa9.73□□□□□ -0.85
VARS-216ENST00000428445 RPL28P46779 137 aaKnown RBP9.73□□□□□ -0.85
VARS-216ENST00000428445 MRPL55Q7Z7F7 128 aaKnown RBP9.73□□□□□ -0.85
VARS-216ENST00000428445 FAT4Q6V0I7 4981 aa9.73□□□□□ -0.85
VARS-216ENST00000428445 PDZD11Q5EBL8 140 aa9.72□□□□□ -0.85
VARS-216ENST00000428445 TRAV9-1A0A075B6T8 112 aa9.71□□□□□ -0.86
VARS-216ENST00000428445 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.86
VARS-216ENST00000428445 BCE1O60756 84 aa9.71□□□□□ -0.86
VARS-216ENST00000428445 TYMSOSQ8TAI1 123 aa9.71□□□□□ -0.86
VARS-216ENST00000428445 GAGE10A6NGK3 116 aa9.7□□□□□ -0.86
VARS-216ENST00000428445 LINC00167Q96N53 147 aa9.7□□□□□ -0.86
VARS-216ENST00000428445 SCGB3A1Q96QR1 104 aa9.7□□□□□ -0.86
VARS-216ENST00000428445 RETNLBQ9BQ08 111 aa9.7□□□□□ -0.86
VARS-216ENST00000428445 IGLV5-45A0A087WSX0 123 aa9.69□□□□□ -0.86
VARS-216ENST00000428445 MUC17Q685J3 4493 aa9.68□□□□□ -0.86
VARS-216ENST00000428445 LINC01546A6NGU7 62 aa9.68□□□□□ -0.86
VARS-216ENST00000428445 SMIM1B2RUZ4 78 aa9.68□□□□□ -0.86
VARS-216ENST00000428445 CRYGAP11844 174 aa9.68□□□□□ -0.86
VARS-216ENST00000428445 KRTAP13-2Q52LG2 175 aa9.68□□□□□ -0.86
VARS-216ENST00000428445 IGLV5-37A0A075B6J1 123 aa9.67□□□□□ -0.86
VARS-216ENST00000428445 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
VARS-216ENST00000428445 COX7B2Q8TF08 81 aa9.67□□□□□ -0.86
VARS-216ENST00000428445 MRPL18Q9H0U6 180 aaKnown RBP9.67□□□□□ -0.86
VARS-216ENST00000428445 A0A0U1RQV1 116 aa9.66□□□□□ -0.86
VARS-216ENST00000428445 SCO1O75880 301 aa9.66□□□□□ -0.86
VARS-216ENST00000428445 GNB1LQ9BYB4 327 aa9.66□□□□□ -0.86
VARS-216ENST00000428445 RAB5BP61020 215 aa9.65□□□□□ -0.86
VARS-216ENST00000428445 CTAG1AP78358 180 aa9.65□□□□□ -0.86
VARS-216ENST00000428445 KIAA1644Q3SXP7 199 aa9.65□□□□□ -0.86
VARS-216ENST00000428445 COX19Q49B96 90 aa9.65□□□□□ -0.86
VARS-216ENST00000428445 CST9LQ9H4G1 147 aa9.65□□□□□ -0.86
VARS-216ENST00000428445 UQCC3Q6UW78 93 aa9.64□□□□□ -0.87
VARS-216ENST00000428445 H3BRM9 83 aa9.63□□□□□ -0.87
VARS-216ENST00000428445 ADCYAP1P18509 176 aa9.63□□□□□ -0.87
VARS-216ENST00000428445 PMVKQ15126 192 aa9.63□□□□□ -0.87
VARS-216ENST00000428445 CLLU1Q5K131 121 aa9.63□□□□□ -0.87
VARS-216ENST00000428445 S100PP25815 95 aa9.62□□□□□ -0.87
VARS-216ENST00000428445 ATP5LO75964 103 aa9.61□□□□□ -0.87
VARS-216ENST00000428445 FAM229BQ4G0N7 80 aa9.61□□□□□ -0.87
VARS-216ENST00000428445 KRTAP13-1Q8IUC0 172 aa9.61□□□□□ -0.87
VARS-216ENST00000428445 NKAPP1Q8N9T2 125 aa9.61□□□□□ -0.87
VARS-216ENST00000428445 TMEM218A2RU14 115 aa9.6□□□□□ -0.87
VARS-216ENST00000428445 UBE2AP49459 152 aa9.6□□□□□ -0.87
VARS-216ENST00000428445 IGKV2-28A0A075B6P5 120 aa9.59□□□□□ -0.87
VARS-216ENST00000428445 IGKV2D-28P01615 120 aa9.59□□□□□ -0.87
VARS-216ENST00000428445 SPINK8P0C7L1 97 aa9.59□□□□□ -0.87
VARS-216ENST00000428445 COX17Q14061 63 aa9.58□□□□□ -0.88
VARS-216ENST00000428445 FA2HQ7L5A8 372 aa9.58□□□□□ -0.88
VARS-216ENST00000428445 LINC00304Q8N9R0 145 aa9.58□□□□□ -0.88
VARS-216ENST00000428445 SMCO4Q9NRQ5 59 aa9.58□□□□□ -0.88
VARS-216ENST00000428445 PRLHP81277 87 aa9.57□□□□□ -0.88
VARS-216ENST00000428445 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
VARS-216ENST00000428445 SEC11CQ9BY50 192 aa9.57□□□□□ -0.88
VARS-216ENST00000428445 IGLV5-39A0A0G2JS06 123 aa9.56□□□□□ -0.88
VARS-216ENST00000428445 IGLC3P0DOY3 106 aa9.56□□□□□ -0.88
VARS-216ENST00000428445 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
VARS-216ENST00000428445 CDIP1Q9H305 208 aa9.55□□□□□ -0.88
VARS-216ENST00000428445 IGLV7-46A0A075B6I9 117 aa9.54□□□□□ -0.88
VARS-216ENST00000428445 TMEM238C9JI98 176 aa9.54□□□□□ -0.88
VARS-216ENST00000428445 PFN2P35080 140 aa9.54□□□□□ -0.88
VARS-216ENST00000428445 FABP9Q0Z7S8 132 aa9.54□□□□□ -0.88
VARS-216ENST00000428445 IGKV2D-26A0A0A0MRZ7 120 aa9.53□□□□□ -0.88
VARS-216ENST00000428445 C3orf22Q8N5N4 141 aa9.53□□□□□ -0.88
VARS-216ENST00000428445 FAM19A1Q7Z5A9 133 aa9.52□□□□□ -0.89
VARS-216ENST00000428445 KRTAP9-6A0A140TA67 174 aa9.51□□□□□ -0.89
VARS-216ENST00000428445 LINC00614P0C842 121 aa9.51□□□□□ -0.89
VARS-216ENST00000428445 VPREB1P12018 145 aa9.51□□□□□ -0.89
VARS-216ENST00000428445 Q8NDZ9 215 aa9.51□□□□□ -0.89
VARS-216ENST00000428445 TMEM126AQ9H061 195 aa9.51□□□□□ -0.89
VARS-216ENST00000428445 SND1-IT1Q9HBX3 110 aa9.51□□□□□ -0.89
VARS-216ENST00000428445 ERG28Q9UKR5 140 aa9.51□□□□□ -0.89
VARS-216ENST00000428445 ZNF22P17026 224 aaPredicted RBP9.5□□□□□ -0.89
VARS-216ENST00000428445 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
VARS-216ENST00000428445 NDUFA6P56556 154 aa9.49□□□□□ -0.89
VARS-216ENST00000428445 M0R378 163 aa9.48□□□□□ -0.89
VARS-216ENST00000428445 RHEBQ15382 184 aa9.48□□□□□ -0.89
VARS-216ENST00000428445 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms