RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 GAGE10A6NGK3 116 aa17.98■□□□□ 0.47
SH3GL3-202ENST00000427482 TSPAN13O95857 204 aa17.98■□□□□ 0.47
SH3GL3-202ENST00000427482 LINC00308Q8TCZ7 52 aa17.98■□□□□ 0.47
SH3GL3-202ENST00000427482 UBE2WQ96B02 151 aa17.98■□□□□ 0.47
SH3GL3-202ENST00000427482 TRAV8-4A0A0B4J246 113 aa17.98■□□□□ 0.47
SH3GL3-202ENST00000427482 MALP21145 153 aa17.98■□□□□ 0.47
SH3GL3-202ENST00000427482 GTF2H5Q6ZYL4 71 aa17.98■□□□□ 0.47
SH3GL3-202ENST00000427482 SPCS1Q9Y6A9 102 aa17.98■□□□□ 0.47
SH3GL3-202ENST00000427482 DNAH9Q9NYC9 4486 aa17.97■□□□□ 0.47
SH3GL3-202ENST00000427482 LINC01556Q5JQF7 62 aa17.97■□□□□ 0.47
SH3GL3-202ENST00000427482 KIAA0087Q14695 138 aa17.95■□□□□ 0.46
SH3GL3-202ENST00000427482 COPS9Q8WXC6 57 aa17.95■□□□□ 0.46
SH3GL3-202ENST00000427482 IBA57-AS1B1ANH7 110 aa17.94■□□□□ 0.46
SH3GL3-202ENST00000427482 SOSTDC1Q6X4U4 206 aa17.93■□□□□ 0.46
SH3GL3-202ENST00000427482 PPDPFQ9H3Y8 114 aa17.93■□□□□ 0.46
SH3GL3-202ENST00000427482 CFAP161Q6P656 301 aa17.91■□□□□ 0.46
SH3GL3-202ENST00000427482 KLK5Q9Y337 293 aaPredicted RBP17.91■□□□□ 0.46
SH3GL3-202ENST00000427482 CXCL5P42830 114 aa17.91■□□□□ 0.46
SH3GL3-202ENST00000427482 C2orf82Q6UX34 121 aa17.91■□□□□ 0.46
SH3GL3-202ENST00000427482 LINC00588Q9Y4M8 146 aa17.91■□□□□ 0.46
SH3GL3-202ENST00000427482 COL7A1Q02388 2944 aa17.9■□□□□ 0.46
SH3GL3-202ENST00000427482 DNAH10OSP0CZ25 163 aa17.9■□□□□ 0.46
SH3GL3-202ENST00000427482 CKS1BP61024 79 aa17.9■□□□□ 0.46
SH3GL3-202ENST00000427482 MIR7-3HGQ8N6C7 128 aa17.9■□□□□ 0.46
SH3GL3-202ENST00000427482 LINC00158P58513 81 aa17.89■□□□□ 0.45
SH3GL3-202ENST00000427482 ERG28Q9UKR5 140 aa17.89■□□□□ 0.45
SH3GL3-202ENST00000427482 KRTAP26-1Q6PEX3 210 aa17.87■□□□□ 0.45
SH3GL3-202ENST00000427482 CCL18P55774 89 aa17.86■□□□□ 0.45
SH3GL3-202ENST00000427482 PFN2P35080 140 aa17.85■□□□□ 0.45
SH3GL3-202ENST00000427482 SPAG11BQ08648 103 aa17.85■□□□□ 0.45
SH3GL3-202ENST00000427482 NHLRC4P0CG21 123 aaPredicted RBP17.84■□□□□ 0.45
SH3GL3-202ENST00000427482 LOC107984156A0A0G2JMH3 177 aa17.83■□□□□ 0.44
SH3GL3-202ENST00000427482 H7C2G1 150 aa17.83■□□□□ 0.44
SH3GL3-202ENST00000427482 ARL17AQ8IVW1 177 aa17.83■□□□□ 0.44
SH3GL3-202ENST00000427482 LYRM7Q5U5X0 104 aa17.82■□□□□ 0.44
SH3GL3-202ENST00000427482 STAB2Q8WWQ8 2551 aa17.81■□□□□ 0.44
SH3GL3-202ENST00000427482 Q1RN00 199 aa17.8■□□□□ 0.44
SH3GL3-202ENST00000427482 C1orf43Q9BWL3 253 aa17.8■□□□□ 0.44
SH3GL3-202ENST00000427482 UPK3BQ9BT76 320 aa17.79■□□□□ 0.44
SH3GL3-202ENST00000427482 C6orf223Q8N319 242 aa17.79■□□□□ 0.44
SH3GL3-202ENST00000427482 RPL13AP40429 203 aaKnown RBP17.78■□□□□ 0.44
SH3GL3-202ENST00000427482 COX17Q14061 63 aa17.78■□□□□ 0.44
SH3GL3-202ENST00000427482 PSMB2P49721 201 aa17.77■□□□□ 0.44
SH3GL3-202ENST00000427482 LINC00526Q96FQ7 95 aa17.77■□□□□ 0.43
SH3GL3-202ENST00000427482 SND1-IT1Q9HBX3 110 aa17.77■□□□□ 0.43
SH3GL3-202ENST00000427482 UNQ6190/PRO20217Q6UXQ8 127 aa17.75■□□□□ 0.43
SH3GL3-202ENST00000427482 IGKV2D-24A0A075B6R9 120 aa17.75■□□□□ 0.43
SH3GL3-202ENST00000427482 TRBV30A0A0K0K1B3 111 aa17.75■□□□□ 0.43
SH3GL3-202ENST00000427482 H3BMG7 143 aa17.75■□□□□ 0.43
SH3GL3-202ENST00000427482 C10orf25Q5T742 122 aa17.75■□□□□ 0.43
SH3GL3-202ENST00000427482 SCGB1C2P0DMR2 95 aa17.74■□□□□ 0.43
SH3GL3-202ENST00000427482 NTN5Q8WTR8 489 aaPredicted RBP17.74■□□□□ 0.43
SH3GL3-202ENST00000427482 KRTAP21-3Q3LHN1 58 aa17.72■□□□□ 0.43
SH3GL3-202ENST00000427482 C9orf116Q5BN46 136 aaPredicted RBP17.72■□□□□ 0.43
SH3GL3-202ENST00000427482 TRBV20-1A0A075B6N2 111 aa17.72■□□□□ 0.43
SH3GL3-202ENST00000427482 TRIAP1O43715 76 aa17.72■□□□□ 0.43
SH3GL3-202ENST00000427482 TCL1BO95988 128 aa17.72■□□□□ 0.43
SH3GL3-202ENST00000427482 C15orf56Q8N910 161 aa17.72■□□□□ 0.43
SH3GL3-202ENST00000427482 Q9HAA7 133 aa17.72■□□□□ 0.43
SH3GL3-202ENST00000427482 APLNQ9ULZ1 77 aa17.72■□□□□ 0.43
SH3GL3-202ENST00000427482 DNHD1Q96M86 4753 aa17.72■□□□□ 0.43
SH3GL3-202ENST00000427482 IGKV2-28A0A075B6P5 120 aa17.7■□□□□ 0.42
SH3GL3-202ENST00000427482 GVQW2A0A096LPI5 108 aaPredicted RBP17.7■□□□□ 0.42
SH3GL3-202ENST00000427482 IGKV2D-28P01615 120 aa17.7■□□□□ 0.42
SH3GL3-202ENST00000427482 DYNC2H1Q8NCM8 4307 aaKnown RBP17.69■□□□□ 0.42
SH3GL3-202ENST00000427482 ZNF561-AS1K7EIQ3 104 aa17.68■□□□□ 0.42
SH3GL3-202ENST00000427482 HIGD2BQ4VC39 106 aa17.68■□□□□ 0.42
SH3GL3-202ENST00000427482 TRAV13-2A0A0B4J235 113 aa17.68■□□□□ 0.42
SH3GL3-202ENST00000427482 MUC7Q8TAX7 377 aa17.67■□□□□ 0.42
SH3GL3-202ENST00000427482 LINC00337Q8N6G1 96 aa17.66■□□□□ 0.42
SH3GL3-202ENST00000427482 C6orf48Q9UBA6 75 aa17.65■□□□□ 0.42
SH3GL3-202ENST00000427482 F8W1H4 67 aa17.65■□□□□ 0.42
SH3GL3-202ENST00000427482 PRO0461Q9UI25 63 aa17.64■□□□□ 0.41
SH3GL3-202ENST00000427482 PRKDCP78527 4128 aaKnown RBP17.64■□□□□ 0.41
SH3GL3-202ENST00000427482 COX6CP09669 75 aa17.63■□□□□ 0.41
SH3GL3-202ENST00000427482 C2orf48Q96LS8 159 aa17.63■□□□□ 0.41
SH3GL3-202ENST00000427482 NUPR2A6NF83 97 aa17.63■□□□□ 0.41
SH3GL3-202ENST00000427482 CAMK2N2Q96S95 79 aa17.63■□□□□ 0.41
SH3GL3-202ENST00000427482 RMI2Q96E14 147 aa17.61■□□□□ 0.41
SH3GL3-202ENST00000427482 MTURNQ8N3F0 131 aa17.61■□□□□ 0.41
SH3GL3-202ENST00000427482 UBE2DNLQ8IWF7 75 aa17.6■□□□□ 0.41
SH3GL3-202ENST00000427482 DNAH1Q9P2D7 4330 aa17.6■□□□□ 0.41
SH3GL3-202ENST00000427482 F8WDY8 70 aa17.59■□□□□ 0.41
SH3GL3-202ENST00000427482 NDUFC2O95298 119 aa17.59■□□□□ 0.41
SH3GL3-202ENST00000427482 ATXN8Q156A1 80 aa17.58■□□□□ 0.41
SH3GL3-202ENST00000427482 WFDC2Q14508 124 aa17.58■□□□□ 0.4
SH3GL3-202ENST00000427482 Q6ZRU5 148 aa17.58■□□□□ 0.4
SH3GL3-202ENST00000427482 MEGF8Q7Z7M0 2845 aa17.57■□□□□ 0.4
SH3GL3-202ENST00000427482 RPL28P46779 137 aaKnown RBP17.54■□□□□ 0.4
SH3GL3-202ENST00000427482 CASC10Q5T4H9 136 aa17.54■□□□□ 0.4
SH3GL3-202ENST00000427482 CLEC2BQ92478 149 aa17.54■□□□□ 0.4
SH3GL3-202ENST00000427482 SMCPP49901 116 aaPredicted RBP17.53■□□□□ 0.4
SH3GL3-202ENST00000427482 KRTAP1-5Q9BYS1 174 aa17.53■□□□□ 0.4
SH3GL3-202ENST00000427482 Q8NDZ9 215 aa17.51■□□□□ 0.39
SH3GL3-202ENST00000427482 USP17L23D6RBM5 183 aa17.51■□□□□ 0.39
SH3GL3-202ENST00000427482 LST1O00453 97 aa17.51■□□□□ 0.39
SH3GL3-202ENST00000427482 PRR3P79522 188 aaKnown RBP17.51■□□□□ 0.39
SH3GL3-202ENST00000427482 LINC01620Q4KN68 170 aa17.51■□□□□ 0.39
SH3GL3-202ENST00000427482 OR13C6PQ8NH95 151 aa17.51■□□□□ 0.39
SH3GL3-202ENST00000427482 SMIM11BQ8TCY0 68 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms