RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 C6orf226Q5I0X4 101 aa14.02□□□□□ -0.17
SEMA3C-204ENST00000427167 C1orf137Q5JT78 98 aa14.02□□□□□ -0.17
SEMA3C-204ENST00000427167 REG3GQ6UW15 175 aa14.02□□□□□ -0.17
SEMA3C-204ENST00000427167 LINC01600Q96MT4 127 aa14.02□□□□□ -0.17
SEMA3C-204ENST00000427167 NDUFC2-KCTD14E9PQ53 114 aa14.01□□□□□ -0.17
SEMA3C-204ENST00000427167 FA2HQ7L5A8 372 aa14.01□□□□□ -0.17
SEMA3C-204ENST00000427167 Q8IZM0 81 aa14.01□□□□□ -0.17
SEMA3C-204ENST00000427167 SMCO4Q9NRQ5 59 aa14.01□□□□□ -0.17
SEMA3C-204ENST00000427167 LINC00469Q8N7U9 141 aa14□□□□□ -0.17
SEMA3C-204ENST00000427167 TNXBP22105 4242 aa14□□□□□ -0.17
SEMA3C-204ENST00000427167 LINC01546A6NGU7 62 aa13.99□□□□□ -0.17
SEMA3C-204ENST00000427167 LINC01549A6NIU2 74 aa13.97□□□□□ -0.17
SEMA3C-204ENST00000427167 M0QXV9 152 aa13.97□□□□□ -0.17
SEMA3C-204ENST00000427167 C9orf129Q5T035 196 aaKnown RBP13.97□□□□□ -0.17
SEMA3C-204ENST00000427167 APOC3P02656 99 aa13.96□□□□□ -0.17
SEMA3C-204ENST00000427167 KRTAP11-1Q8IUC1 163 aa13.96□□□□□ -0.17
SEMA3C-204ENST00000427167 KRTAP7-1Q8IUC3 87 aa13.96□□□□□ -0.17
SEMA3C-204ENST00000427167 TINCRA0A1B0GVN0 87 aa13.95□□□□□ -0.18
SEMA3C-204ENST00000427167 CST9LQ9H4G1 147 aa13.95□□□□□ -0.18
SEMA3C-204ENST00000427167 TRAPPC1Q9Y5R8 145 aa13.95□□□□□ -0.18
SEMA3C-204ENST00000427167 SMIM1B2RUZ4 78 aa13.94□□□□□ -0.18
SEMA3C-204ENST00000427167 UBE2BP63146 152 aa13.94□□□□□ -0.18
SEMA3C-204ENST00000427167 ODF1Q14990 250 aa13.94□□□□□ -0.18
SEMA3C-204ENST00000427167 F8VRH5 84 aa13.93□□□□□ -0.18
SEMA3C-204ENST00000427167 PMVKQ15126 192 aa13.92□□□□□ -0.18
SEMA3C-204ENST00000427167 IGLV7-43P04211 117 aa13.91□□□□□ -0.18
SEMA3C-204ENST00000427167 NDUFA5Q16718 116 aa13.91□□□□□ -0.18
SEMA3C-204ENST00000427167 XAGE1AQ9HD64 81 aa13.91□□□□□ -0.18
SEMA3C-204ENST00000427167 SNAPINO95295 136 aa13.9□□□□□ -0.18
SEMA3C-204ENST00000427167 SPINK8P0C7L1 97 aa13.9□□□□□ -0.18
SEMA3C-204ENST00000427167 CXCL5P42830 114 aa13.9□□□□□ -0.18
SEMA3C-204ENST00000427167 C18orf32Q8TCD1 76 aa13.9□□□□□ -0.18
SEMA3C-204ENST00000427167 COX7B2Q8TF08 81 aa13.9□□□□□ -0.18
SEMA3C-204ENST00000427167 IGLV5-45A0A087WSX0 123 aa13.89□□□□□ -0.19
SEMA3C-204ENST00000427167 NDUFA6P56556 154 aa13.89□□□□□ -0.19
SEMA3C-204ENST00000427167 PDZD11Q5EBL8 140 aa13.89□□□□□ -0.19
SEMA3C-204ENST00000427167 SVBPQ8N300 66 aa13.89□□□□□ -0.19
SEMA3C-204ENST00000427167 KRTAP10-8P60410 259 aa13.88□□□□□ -0.19
SEMA3C-204ENST00000427167 PMCHL1Q16048 86 aa13.88□□□□□ -0.19
SEMA3C-204ENST00000427167 URB1-AS1Q96HZ7 61 aa13.88□□□□□ -0.19
SEMA3C-204ENST00000427167 A0A096LNJ9 63 aa13.87□□□□□ -0.19
SEMA3C-204ENST00000427167 LINC00614P0C842 121 aa13.87□□□□□ -0.19
SEMA3C-204ENST00000427167 DIRC1Q969H9 104 aa13.86□□□□□ -0.19
SEMA3C-204ENST00000427167 H3BRM9 83 aa13.84□□□□□ -0.19
SEMA3C-204ENST00000427167 HBDP02042 147 aa13.84□□□□□ -0.19
SEMA3C-204ENST00000427167 UBR4Q5T4S7 5183 aa13.84□□□□□ -0.19
SEMA3C-204ENST00000427167 C22orf24Q9Y442 160 aa13.83□□□□□ -0.2
SEMA3C-204ENST00000427167 RAB5BP61020 215 aa13.82□□□□□ -0.2
SEMA3C-204ENST00000427167 H0Y9J4 135 aa13.81□□□□□ -0.2
SEMA3C-204ENST00000427167 IGLC3P0DOY3 106 aa13.81□□□□□ -0.2
SEMA3C-204ENST00000427167 LBHQ53QV2 105 aaPredicted RBP13.79□□□□□ -0.2
SEMA3C-204ENST00000427167 ATP5LO75964 103 aa13.78□□□□□ -0.2
SEMA3C-204ENST00000427167 ZNF22P17026 224 aaPredicted RBP13.78□□□□□ -0.2
SEMA3C-204ENST00000427167 MRPL55Q7Z7F7 128 aaKnown RBP13.77□□□□□ -0.21
SEMA3C-204ENST00000427167 BAGE3Q86Y29 109 aa13.76□□□□□ -0.21
SEMA3C-204ENST00000427167 PRR26Q8N8Z3 221 aa13.76□□□□□ -0.21
SEMA3C-204ENST00000427167 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
SEMA3C-204ENST00000427167 IGLV5-39A0A0G2JS06 123 aa13.75□□□□□ -0.21
SEMA3C-204ENST00000427167 TP73-AS1Q9UF72 201 aa13.74□□□□□ -0.21
SEMA3C-204ENST00000427167 C11orf86A6NJI1 115 aa13.73□□□□□ -0.21
SEMA3C-204ENST00000427167 PFN2P35080 140 aa13.73□□□□□ -0.21
SEMA3C-204ENST00000427167 TMEM170BQ5T4T1 132 aa13.73□□□□□ -0.21
SEMA3C-204ENST00000427167 GAGE10A6NGK3 116 aa13.72□□□□□ -0.21
SEMA3C-204ENST00000427167 NUPR1O60356 82 aa13.72□□□□□ -0.21
SEMA3C-204ENST00000427167 CBLN2Q8IUK8 224 aa13.72□□□□□ -0.21
SEMA3C-204ENST00000427167 RPL37AP8A6NKH3 93 aa13.71□□□□□ -0.21
SEMA3C-204ENST00000427167 ZNF861PO60384 105 aa13.7□□□□□ -0.22
SEMA3C-204ENST00000427167 LINC00167Q96N53 147 aa13.7□□□□□ -0.22
SEMA3C-204ENST00000427167 CHTOPQ9Y3Y2 248 aaKnown RBP13.7□□□□□ -0.22
SEMA3C-204ENST00000427167 KRTAP1-4P0C5Y4 121 aa13.69□□□□□ -0.22
SEMA3C-204ENST00000427167 NKAPP1Q8N9T2 125 aa13.69□□□□□ -0.22
SEMA3C-204ENST00000427167 CHCHD1Q96BP2 118 aaKnown RBP13.69□□□□□ -0.22
SEMA3C-204ENST00000427167 ZNF625Q96I27 306 aaPredicted RBP13.69□□□□□ -0.22
SEMA3C-204ENST00000427167 ERG28Q9UKR5 140 aa13.67□□□□□ -0.22
SEMA3C-204ENST00000427167 IGLV1-50A0A075B6I6 118 aa13.66□□□□□ -0.22
SEMA3C-204ENST00000427167 IGLV5-37A0A075B6J1 123 aa13.65□□□□□ -0.22
SEMA3C-204ENST00000427167 BCE1O60756 84 aa13.65□□□□□ -0.22
SEMA3C-204ENST00000427167 IFI27L1Q96BM0 104 aa13.65□□□□□ -0.22
SEMA3C-204ENST00000427167 LRP2P98164 4655 aa13.64□□□□□ -0.23
SEMA3C-204ENST00000427167 SCO1O75880 301 aa13.64□□□□□ -0.23
SEMA3C-204ENST00000427167 RPL28P46779 137 aaKnown RBP13.63□□□□□ -0.23
SEMA3C-204ENST00000427167 SND1-IT1Q9HBX3 110 aa13.63□□□□□ -0.23
SEMA3C-204ENST00000427167 HSBP1O75506 76 aa13.62□□□□□ -0.23
SEMA3C-204ENST00000427167 FAM19A2Q8N3H0 131 aa13.62□□□□□ -0.23
SEMA3C-204ENST00000427167 IGKV2-28A0A075B6P5 120 aa13.61□□□□□ -0.23
SEMA3C-204ENST00000427167 TRAV12-1A0A0B4J245 112 aa13.61□□□□□ -0.23
SEMA3C-204ENST00000427167 IGKV2D-28P01615 120 aa13.61□□□□□ -0.23
SEMA3C-204ENST00000427167 TRGC2P03986 189 aa13.61□□□□□ -0.23
SEMA3C-204ENST00000427167 COX17Q14061 63 aa13.61□□□□□ -0.23
SEMA3C-204ENST00000427167 SFTA2Q6UW10 78 aa13.6□□□□□ -0.23
SEMA3C-204ENST00000427167 SLC7A5P1Q8MH63 180 aa13.6□□□□□ -0.23
SEMA3C-204ENST00000427167 TMEM223A0PJW6 202 aa13.59□□□□□ -0.23
SEMA3C-204ENST00000427167 RPL13AP40429 203 aaKnown RBP13.59□□□□□ -0.23
SEMA3C-204ENST00000427167 H0Y8G0 127 aa13.58□□□□□ -0.24
SEMA3C-204ENST00000427167 VPREB1P12018 145 aa13.58□□□□□ -0.24
SEMA3C-204ENST00000427167 UBE2AP49459 152 aa13.58□□□□□ -0.24
SEMA3C-204ENST00000427167 LINC00158P58513 81 aa13.57□□□□□ -0.24
SEMA3C-204ENST00000427167 A0A0U1RRA0 63 aa13.56□□□□□ -0.24
SEMA3C-204ENST00000427167 RPL24P83731 157 aaKnown RBP13.56□□□□□ -0.24
SEMA3C-204ENST00000427167 Q8NDZ9 215 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms