RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 X6R8D5 127 aa12.77□□□□□ -0.36
ARHGEF28-203ENST00000426542 CSDC2Q9Y534 153 aaKnown RBP12.77□□□□□ -0.37
ARHGEF28-203ENST00000426542 TRBV7-6A0A0J9YX20 115 aa12.77□□□□□ -0.37
ARHGEF28-203ENST00000426542 EML5Q05BV3 1969 aa12.76□□□□□ -0.37
ARHGEF28-203ENST00000426542 LINC00575Q6W349 94 aa12.76□□□□□ -0.37
ARHGEF28-203ENST00000426542 LYPD5Q6UWN5 251 aa12.75□□□□□ -0.37
ARHGEF28-203ENST00000426542 SOSTDC1Q6X4U4 206 aa12.75□□□□□ -0.37
ARHGEF28-203ENST00000426542 SONP18583 2426 aaKnown RBP12.75□□□□□ -0.37
ARHGEF28-203ENST00000426542 SMIM26A0A096LP01 95 aa12.75□□□□□ -0.37
ARHGEF28-203ENST00000426542 PCOTHQ58A44 107 aa12.75□□□□□ -0.37
ARHGEF28-203ENST00000426542 A0A1W2PPR1 153 aa12.75□□□□□ -0.37
ARHGEF28-203ENST00000426542 PRYO14603 147 aa12.75□□□□□ -0.37
ARHGEF28-203ENST00000426542 DEFB116Q30KQ4 102 aa12.75□□□□□ -0.37
ARHGEF28-203ENST00000426542 BEAN1Q3B7T3 259 aa12.74□□□□□ -0.37
ARHGEF28-203ENST00000426542 HIVEP3Q5T1R4 2406 aa12.73□□□□□ -0.37
ARHGEF28-203ENST00000426542 C1orf134Q5TEV5 83 aa12.73□□□□□ -0.37
ARHGEF28-203ENST00000426542 TTC28Q96AY4 2481 aa12.73□□□□□ -0.37
ARHGEF28-203ENST00000426542 A0A087WSZ3 146 aa12.72□□□□□ -0.37
ARHGEF28-203ENST00000426542 F8WDY8 70 aa12.72□□□□□ -0.37
ARHGEF28-203ENST00000426542 Q8N3U1 123 aa12.71□□□□□ -0.37
ARHGEF28-203ENST00000426542 C1orf195Q5TG92 126 aa12.71□□□□□ -0.37
ARHGEF28-203ENST00000426542 C2orf48Q96LS8 159 aa12.71□□□□□ -0.37
ARHGEF28-203ENST00000426542 A0A1B0GUV1 79 aa12.71□□□□□ -0.38
ARHGEF28-203ENST00000426542 EXPH5Q8NEV8 1989 aa12.71□□□□□ -0.38
ARHGEF28-203ENST00000426542 PTPRSQ13332 1948 aa12.7□□□□□ -0.38
ARHGEF28-203ENST00000426542 PRRC2AP48634 2157 aaKnown RBP12.7□□□□□ -0.38
ARHGEF28-203ENST00000426542 SPINK1P00995 79 aa12.7□□□□□ -0.38
ARHGEF28-203ENST00000426542 COX8CQ7Z4L0 72 aa12.7□□□□□ -0.38
ARHGEF28-203ENST00000426542 A8MTW9 85 aa12.69□□□□□ -0.38
ARHGEF28-203ENST00000426542 C10orf142B7Z368 130 aa12.69□□□□□ -0.38
ARHGEF28-203ENST00000426542 H0Y9P7 68 aa12.68□□□□□ -0.38
ARHGEF28-203ENST00000426542 Q6ZRU5 148 aa12.68□□□□□ -0.38
ARHGEF28-203ENST00000426542 TRBV7-7A0A0K0K1E9 115 aa12.68□□□□□ -0.38
ARHGEF28-203ENST00000426542 A0A096LNJ9 63 aa12.67□□□□□ -0.38
ARHGEF28-203ENST00000426542 CPAMD8Q8IZJ3 1885 aa12.67□□□□□ -0.38
ARHGEF28-203ENST00000426542 SBSPONQ8IVN8 264 aa12.66□□□□□ -0.38
ARHGEF28-203ENST00000426542 PRLHP81277 87 aa12.66□□□□□ -0.38
ARHGEF28-203ENST00000426542 FSHBP01225 129 aa12.65□□□□□ -0.39
ARHGEF28-203ENST00000426542 NAV3Q8IVL0 2385 aa12.64□□□□□ -0.39
ARHGEF28-203ENST00000426542 LINC01561Q8N1V8 128 aa12.64□□□□□ -0.39
ARHGEF28-203ENST00000426542 HCG22E2RYF7 251 aa12.62□□□□□ -0.39
ARHGEF28-203ENST00000426542 PMAIP1Q13794 54 aa12.62□□□□□ -0.39
ARHGEF28-203ENST00000426542 PSPHP1O15172 72 aa12.61□□□□□ -0.39
ARHGEF28-203ENST00000426542 C22orf24Q9Y442 160 aa12.61□□□□□ -0.39
ARHGEF28-203ENST00000426542 SMCR5Q8TEV8 140 aa12.6□□□□□ -0.39
ARHGEF28-203ENST00000426542 ATRXP46100 2492 aa12.6□□□□□ -0.39
ARHGEF28-203ENST00000426542 FHL3Q13643 280 aa12.59□□□□□ -0.39
ARHGEF28-203ENST00000426542 LINC00337Q8N6G1 96 aa12.58□□□□□ -0.4
ARHGEF28-203ENST00000426542 LIMD2Q9BT23 127 aa12.58□□□□□ -0.4
ARHGEF28-203ENST00000426542 LINC00846Q9NV44 126 aa12.58□□□□□ -0.4
ARHGEF28-203ENST00000426542 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
ARHGEF28-203ENST00000426542 CRYGAP11844 174 aa12.56□□□□□ -0.4
ARHGEF28-203ENST00000426542 NAV2Q8IVL1 2488 aa12.55□□□□□ -0.4
ARHGEF28-203ENST00000426542 Q8N2B8 174 aa12.55□□□□□ -0.4
ARHGEF28-203ENST00000426542 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
ARHGEF28-203ENST00000426542 TMEM254Q8TBM7 123 aa12.55□□□□□ -0.4
ARHGEF28-203ENST00000426542 C11orf72Q8NBR9 251 aa12.54□□□□□ -0.4
ARHGEF28-203ENST00000426542 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF28-203ENST00000426542 AGRNO00468 2067 aa12.53□□□□□ -0.4
ARHGEF28-203ENST00000426542 KIAA0087Q14695 138 aa12.53□□□□□ -0.4
ARHGEF28-203ENST00000426542 KIF25-AS1Q9Y6Z4 181 aa12.52□□□□□ -0.4
ARHGEF28-203ENST00000426542 COL5A1P20908 1838 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF28-203ENST00000426542 IGKV2D-30A0A075B6S6 120 aa12.51□□□□□ -0.41
ARHGEF28-203ENST00000426542 IGKV2-30P06310 120 aa12.51□□□□□ -0.41
ARHGEF28-203ENST00000426542 C1orf64Q8NEQ6 169 aa12.5□□□□□ -0.41
ARHGEF28-203ENST00000426542 MDFIQ99750 246 aa12.5□□□□□ -0.41
ARHGEF28-203ENST00000426542 hDV103S1A0JD37 113 aa12.49□□□□□ -0.41
ARHGEF28-203ENST00000426542 CXCL6P80162 114 aa12.49□□□□□ -0.41
ARHGEF28-203ENST00000426542 SMIM29Q86T20 159 aa12.48□□□□□ -0.41
ARHGEF28-203ENST00000426542 Q9UF83 564 aa12.48□□□□□ -0.41
ARHGEF28-203ENST00000426542 IGLV5-39A0A0G2JS06 123 aa12.47□□□□□ -0.41
ARHGEF28-203ENST00000426542 C7orf65Q6ZTY9 151 aa12.47□□□□□ -0.41
ARHGEF28-203ENST00000426542 SPATA3Q8NHX4 192 aa12.45□□□□□ -0.42
ARHGEF28-203ENST00000426542 CCDC168Q8NDH2 2452 aa12.45□□□□□ -0.42
ARHGEF28-203ENST00000426542 SPACA4Q8TDM5 124 aa12.45□□□□□ -0.42
ARHGEF28-203ENST00000426542 LINC00167Q96N53 147 aa12.45□□□□□ -0.42
ARHGEF28-203ENST00000426542 MOBPQ13875 183 aa12.44□□□□□ -0.42
ARHGEF28-203ENST00000426542 LINC01546A6NGU7 62 aa12.44□□□□□ -0.42
ARHGEF28-203ENST00000426542 IGHV3OR16-9A0A0B4J2B5 98 aa12.43□□□□□ -0.42
ARHGEF28-203ENST00000426542 C6orf48Q9UBA6 75 aa12.43□□□□□ -0.42
ARHGEF28-203ENST00000426542 C2CD3Q4AC94 2353 aa12.43□□□□□ -0.42
ARHGEF28-203ENST00000426542 ABCA2Q9BZC7 2435 aa12.43□□□□□ -0.42
ARHGEF28-203ENST00000426542 TET2Q6N021 2002 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF28-203ENST00000426542 FAM19A4Q96LR4 140 aa12.41□□□□□ -0.42
ARHGEF28-203ENST00000426542 LINC00315P59091 139 aa12.39□□□□□ -0.43
ARHGEF28-203ENST00000426542 CDIP1Q9H305 208 aa12.38□□□□□ -0.43
ARHGEF28-203ENST00000426542 PHF5AQ7RTV0 110 aaKnown RBP12.35□□□□□ -0.43
ARHGEF28-203ENST00000426542 MYO18BQ8IUG5 2567 aa12.35□□□□□ -0.43
ARHGEF28-203ENST00000426542 PIEZO2Q9H5I5 2752 aa12.35□□□□□ -0.43
ARHGEF28-203ENST00000426542 A0A1B0GU69 56 aa12.34□□□□□ -0.43
ARHGEF28-203ENST00000426542 FAM218AQ96MZ4 157 aa12.33□□□□□ -0.44
ARHGEF28-203ENST00000426542 ELOF1P60002 83 aaKnown RBP12.33□□□□□ -0.44
ARHGEF28-203ENST00000426542 TP53AIP1Q9HCN2 124 aa12.33□□□□□ -0.44
ARHGEF28-203ENST00000426542 IGF2RP11717 2491 aa12.33□□□□□ -0.44
ARHGEF28-203ENST00000426542 CHTF8P0CG12 524 aa12.31□□□□□ -0.44
ARHGEF28-203ENST00000426542 ACYP2P14621 99 aa12.31□□□□□ -0.44
ARHGEF28-203ENST00000426542 NCOR2Q9Y618 2525 aa12.3□□□□□ -0.44
ARHGEF28-203ENST00000426542 IGLV5-45A0A087WSX0 123 aa12.3□□□□□ -0.44
ARHGEF28-203ENST00000426542 H3BNG1 76 aa12.29□□□□□ -0.44
ARHGEF28-203ENST00000426542 RTL8CO15255 209 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms