RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 M0R2N4 97 aa10.61□□□□□ -0.71
SHOX2-202ENST00000425436 Q9H8V8 135 aa10.61□□□□□ -0.71
SHOX2-202ENST00000425436 K7ERJ3 54 aa10.6□□□□□ -0.71
SHOX2-202ENST00000425436 IGKV3OR2-268A0A0C4DH90 116 aa10.59□□□□□ -0.71
SHOX2-202ENST00000425436 MIAQ16674 131 aa10.59□□□□□ -0.71
SHOX2-202ENST00000425436 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
SHOX2-202ENST00000425436 MUSTN1Q8IVN3 82 aa10.59□□□□□ -0.71
SHOX2-202ENST00000425436 LITAFQ99732 161 aa10.59□□□□□ -0.71
SHOX2-202ENST00000425436 UPK3BQ9BT76 320 aa10.59□□□□□ -0.71
SHOX2-202ENST00000425436 DNAH6Q9C0G6 4158 aa10.59□□□□□ -0.71
SHOX2-202ENST00000425436 PRSS2P07478 247 aa10.58□□□□□ -0.72
SHOX2-202ENST00000425436 K7EP34 96 aa10.58□□□□□ -0.72
SHOX2-202ENST00000425436 COX7B2Q8TF08 81 aa10.58□□□□□ -0.72
SHOX2-202ENST00000425436 ZNF625Q96I27 306 aaPredicted RBP10.58□□□□□ -0.72
SHOX2-202ENST00000425436 PPDPFQ9H3Y8 114 aa10.58□□□□□ -0.72
SHOX2-202ENST00000425436 A0A0B4J2C4 111 aa10.57□□□□□ -0.72
SHOX2-202ENST00000425436 ANGP03950 147 aaKnown RBP10.57□□□□□ -0.72
SHOX2-202ENST00000425436 LYRM7Q5U5X0 104 aa10.57□□□□□ -0.72
SHOX2-202ENST00000425436 PRO1854Q9UHT4 67 aa10.57□□□□□ -0.72
SHOX2-202ENST00000425436 A4D1N5 150 aa10.56□□□□□ -0.72
SHOX2-202ENST00000425436 CFC1BP0CG36 223 aa10.56□□□□□ -0.72
SHOX2-202ENST00000425436 CFC1P0CG37 223 aa10.56□□□□□ -0.72
SHOX2-202ENST00000425436 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
SHOX2-202ENST00000425436 LINC00269Q8N2A0 174 aa10.56□□□□□ -0.72
SHOX2-202ENST00000425436 SPCS1Q9Y6A9 102 aa10.56□□□□□ -0.72
SHOX2-202ENST00000425436 APOMO95445 188 aa10.55□□□□□ -0.72
SHOX2-202ENST00000425436 REG3AQ06141 175 aa10.55□□□□□ -0.72
SHOX2-202ENST00000425436 ADAMTSL4-AS1Q5T5F5 129 aa10.54□□□□□ -0.72
SHOX2-202ENST00000425436 PGPEP1Q9NXJ5 209 aa10.54□□□□□ -0.72
SHOX2-202ENST00000425436 NBDYA0A0U1RRE5 68 aa10.53□□□□□ -0.72
SHOX2-202ENST00000425436 XCL1P47992 114 aa10.53□□□□□ -0.72
SHOX2-202ENST00000425436 MEIG1Q5JSS6 88 aa10.53□□□□□ -0.72
SHOX2-202ENST00000425436 C5orf38Q86SI9 138 aa10.53□□□□□ -0.72
SHOX2-202ENST00000425436 Q8N3U1 123 aa10.53□□□□□ -0.72
SHOX2-202ENST00000425436 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
SHOX2-202ENST00000425436 NAA38Q9BRA0 125 aaKnown RBP10.53□□□□□ -0.72
SHOX2-202ENST00000425436 KRTAP1-5Q9BYS1 174 aa10.53□□□□□ -0.72
SHOX2-202ENST00000425436 COX7A2LO14548 114 aa10.52□□□□□ -0.73
SHOX2-202ENST00000425436 C6orf226Q5I0X4 101 aa10.52□□□□□ -0.73
SHOX2-202ENST00000425436 Q6ZR54 194 aa10.52□□□□□ -0.73
SHOX2-202ENST00000425436 Q8IZM0 81 aa10.52□□□□□ -0.73
SHOX2-202ENST00000425436 CHCHD10Q8WYQ3 142 aaPredicted RBP10.52□□□□□ -0.73
SHOX2-202ENST00000425436 PRR34Q9NV39 138 aa10.52□□□□□ -0.73
SHOX2-202ENST00000425436 TOMM7Q9P0U1 55 aa10.52□□□□□ -0.73
SHOX2-202ENST00000425436 TRAV8-4A0A0B4J246 113 aa10.51□□□□□ -0.73
SHOX2-202ENST00000425436 DNAH10OSP0CZ25 163 aa10.51□□□□□ -0.73
SHOX2-202ENST00000425436 ERG28Q9UKR5 140 aa10.51□□□□□ -0.73
SHOX2-202ENST00000425436 DNAH2Q9P225 4427 aa10.5□□□□□ -0.73
SHOX2-202ENST00000425436 IBA57-AS1B1ANH7 110 aa10.5□□□□□ -0.73
SHOX2-202ENST00000425436 TSPAN13O95857 204 aa10.5□□□□□ -0.73
SHOX2-202ENST00000425436 CXCL5P42830 114 aa10.5□□□□□ -0.73
SHOX2-202ENST00000425436 LINC00308Q8TCZ7 52 aa10.49□□□□□ -0.73
SHOX2-202ENST00000425436 TRBV20-1A0A075B6N2 111 aa10.48□□□□□ -0.73
SHOX2-202ENST00000425436 MALP21145 153 aa10.48□□□□□ -0.73
SHOX2-202ENST00000425436 LINC01556Q5JQF7 62 aa10.48□□□□□ -0.73
SHOX2-202ENST00000425436 CLPSL2Q6UWE3 100 aa10.48□□□□□ -0.73
SHOX2-202ENST00000425436 CRPP02741 224 aa10.47□□□□□ -0.73
SHOX2-202ENST00000425436 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
SHOX2-202ENST00000425436 KLK12Q9UKR0 248 aa10.47□□□□□ -0.73
SHOX2-202ENST00000425436 FRAS1Q86XX4 4008 aa10.46□□□□□ -0.73
SHOX2-202ENST00000425436 CFAP161Q6P656 301 aa10.46□□□□□ -0.74
SHOX2-202ENST00000425436 LOC107984156A0A0G2JMH3 177 aa10.45□□□□□ -0.74
SHOX2-202ENST00000425436 F8W1H4 67 aa10.45□□□□□ -0.74
SHOX2-202ENST00000425436 CKS1BP61024 79 aa10.45□□□□□ -0.74
SHOX2-202ENST00000425436 FOXI1Q12951 378 aa10.45□□□□□ -0.74
SHOX2-202ENST00000425436 ARL17AQ8IVW1 177 aa10.45□□□□□ -0.74
SHOX2-202ENST00000425436 DNAH10Q8IVF4 4471 aa10.45□□□□□ -0.74
SHOX2-202ENST00000425436 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
SHOX2-202ENST00000425436 LINC00158P58513 81 aa10.44□□□□□ -0.74
SHOX2-202ENST00000425436 C1orf134Q5TEV5 83 aa10.44□□□□□ -0.74
SHOX2-202ENST00000425436 PSMB2P49721 201 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 COX17Q14061 63 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 ENHOQ6UWT2 76 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 C6orf223Q8N319 242 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 DAND5Q8N907 189 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 IGLV10-54A0A075B6I4 117 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 TRBV30A0A0K0K1B3 111 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 GAGE12HA6NDE8 117 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 RTL8CO15255 209 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 COX6CP09669 75 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 NPC2P61916 151 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 Q1RN00 199 aa10.43□□□□□ -0.74
SHOX2-202ENST00000425436 A0A0U1RRA0 63 aa10.42□□□□□ -0.74
SHOX2-202ENST00000425436 EIF4EBP3O60516 100 aaPredicted RBP10.42□□□□□ -0.74
SHOX2-202ENST00000425436 Q9HAA7 133 aa10.42□□□□□ -0.74
SHOX2-202ENST00000425436 KIAA0087Q14695 138 aa10.41□□□□□ -0.74
SHOX2-202ENST00000425436 MIR7-3HGQ8N6C7 128 aa10.41□□□□□ -0.74
SHOX2-202ENST00000425436 UBE2WQ96B02 151 aa10.41□□□□□ -0.74
SHOX2-202ENST00000425436 TRAV13-2A0A0B4J235 113 aa10.4□□□□□ -0.74
SHOX2-202ENST00000425436 H3BMG7 143 aa10.39□□□□□ -0.75
SHOX2-202ENST00000425436 H7C2G1 150 aa10.38□□□□□ -0.75
SHOX2-202ENST00000425436 SOSTDC1Q6X4U4 206 aa10.38□□□□□ -0.75
SHOX2-202ENST00000425436 DNAH17Q9UFH2 4485 aa10.38□□□□□ -0.75
SHOX2-202ENST00000425436 PFN2P35080 140 aa10.37□□□□□ -0.75
SHOX2-202ENST00000425436 RPL13AP40429 203 aaKnown RBP10.37□□□□□ -0.75
SHOX2-202ENST00000425436 SPAG11BQ08648 103 aa10.37□□□□□ -0.75
SHOX2-202ENST00000425436 Q6ZRN7 208 aaPredicted RBP10.37□□□□□ -0.75
SHOX2-202ENST00000425436 SND1-IT1Q9HBX3 110 aa10.37□□□□□ -0.75
SHOX2-202ENST00000425436 FAT2Q9NYQ8 4349 aa10.36□□□□□ -0.75
SHOX2-202ENST00000425436 ATXN8Q156A1 80 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms