RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
SREBF1-206ENST00000423161 CDKN2A-AS1Q9UH64 79 aa11.1□□□□□ -0.63
SREBF1-206ENST00000423161 G0S2P27469 103 aa11.09□□□□□ -0.63
SREBF1-206ENST00000423161 TIMM17AQ99595 171 aa11.09□□□□□ -0.63
SREBF1-206ENST00000423161 TOMM6Q96B49 74 aa11.08□□□□□ -0.64
SREBF1-206ENST00000423161 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
SREBF1-206ENST00000423161 F8VRH5 84 aa11.07□□□□□ -0.64
SREBF1-206ENST00000423161 RPL13AP40429 203 aaKnown RBP11.07□□□□□ -0.64
SREBF1-206ENST00000423161 KIAA1644Q3SXP7 199 aa11.07□□□□□ -0.64
SREBF1-206ENST00000423161 LPAP08519 4548 aa11.07□□□□□ -0.64
SREBF1-206ENST00000423161 NUPR1O60356 82 aa11.06□□□□□ -0.64
SREBF1-206ENST00000423161 ZNF861PO60384 105 aa11.06□□□□□ -0.64
SREBF1-206ENST00000423161 LBHQ53QV2 105 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-206ENST00000423161 CXCL5P42830 114 aa11.05□□□□□ -0.64
SREBF1-206ENST00000423161 ERASQ7Z444 233 aa11.04□□□□□ -0.64
SREBF1-206ENST00000423161 SCGB3A1Q96QR1 104 aa11.04□□□□□ -0.64
SREBF1-206ENST00000423161 SMIM1B2RUZ4 78 aa11.03□□□□□ -0.64
SREBF1-206ENST00000423161 TP73-AS1Q9UF72 201 aa11.03□□□□□ -0.64
SREBF1-206ENST00000423161 CARHSP1Q9Y2V2 147 aaKnown RBP11.03□□□□□ -0.64
SREBF1-206ENST00000423161 MRPL55Q7Z7F7 128 aaKnown RBP11.02□□□□□ -0.65
SREBF1-206ENST00000423161 ADCYAP1P18509 176 aa11.01□□□□□ -0.65
SREBF1-206ENST00000423161 CLLU1Q5K131 121 aa11.01□□□□□ -0.65
SREBF1-206ENST00000423161 COX7B2Q8TF08 81 aa11.01□□□□□ -0.65
SREBF1-206ENST00000423161 TRAV9-1A0A075B6T8 112 aa11□□□□□ -0.65
SREBF1-206ENST00000423161 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
SREBF1-206ENST00000423161 PRR4Q16378 134 aa11□□□□□ -0.65
SREBF1-206ENST00000423161 PDZD11Q5EBL8 140 aa11□□□□□ -0.65
SREBF1-206ENST00000423161 IGLV5-45A0A087WSX0 123 aa10.99□□□□□ -0.65
SREBF1-206ENST00000423161 LINC01549A6NIU2 74 aa10.98□□□□□ -0.65
SREBF1-206ENST00000423161 BCE1O60756 84 aa10.98□□□□□ -0.65
SREBF1-206ENST00000423161 RPL28P46779 137 aaKnown RBP10.98□□□□□ -0.65
SREBF1-206ENST00000423161 SPINK8P0C7L1 97 aa10.97□□□□□ -0.65
SREBF1-206ENST00000423161 LINC00167Q96N53 147 aa10.97□□□□□ -0.65
SREBF1-206ENST00000423161 TMEM218A2RU14 115 aa10.96□□□□□ -0.65
SREBF1-206ENST00000423161 LINC01546A6NGU7 62 aa10.96□□□□□ -0.65
SREBF1-206ENST00000423161 RPL37AP8A6NKH3 93 aa10.96□□□□□ -0.65
SREBF1-206ENST00000423161 UQCC3Q6UW78 93 aa10.96□□□□□ -0.65
SREBF1-206ENST00000423161 GNB1LQ9BYB4 327 aa10.96□□□□□ -0.65
SREBF1-206ENST00000423161 CST9LQ9H4G1 147 aa10.96□□□□□ -0.65
SREBF1-206ENST00000423161 S100PP25815 95 aa10.95□□□□□ -0.66
SREBF1-206ENST00000423161 GAGE10A6NGK3 116 aa10.94□□□□□ -0.66
SREBF1-206ENST00000423161 RAB5BP61020 215 aa10.94□□□□□ -0.66
SREBF1-206ENST00000423161 PMVKQ15126 192 aa10.94□□□□□ -0.66
SREBF1-206ENST00000423161 A0A087X002 238 aa10.93□□□□□ -0.66
SREBF1-206ENST00000423161 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
SREBF1-206ENST00000423161 SMCO4Q9NRQ5 59 aa10.93□□□□□ -0.66
SREBF1-206ENST00000423161 IGLV5-37A0A075B6J1 123 aa10.92□□□□□ -0.66
SREBF1-206ENST00000423161 TSPAN13O95857 204 aa10.92□□□□□ -0.66
SREBF1-206ENST00000423161 NKAPP1Q8N9T2 125 aa10.92□□□□□ -0.66
SREBF1-206ENST00000423161 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
SREBF1-206ENST00000423161 H3BRM9 83 aa10.91□□□□□ -0.66
SREBF1-206ENST00000423161 CRYGAP11844 174 aa10.91□□□□□ -0.66
SREBF1-206ENST00000423161 COX19Q49B96 90 aa10.91□□□□□ -0.66
SREBF1-206ENST00000423161 SEC11CQ9BY50 192 aa10.91□□□□□ -0.66
SREBF1-206ENST00000423161 ATP5LO75964 103 aa10.9□□□□□ -0.66
SREBF1-206ENST00000423161 TYMSOSQ8TAI1 123 aa10.9□□□□□ -0.66
SREBF1-206ENST00000423161 UBE2AP49459 152 aa10.89□□□□□ -0.67
SREBF1-206ENST00000423161 FABP9Q0Z7S8 132 aa10.89□□□□□ -0.67
SREBF1-206ENST00000423161 IGLC3P0DOY3 106 aa10.87□□□□□ -0.67
SREBF1-206ENST00000423161 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
SREBF1-206ENST00000423161 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
SREBF1-206ENST00000423161 IGKV2-28A0A075B6P5 120 aa10.86□□□□□ -0.67
SREBF1-206ENST00000423161 SCO1O75880 301 aa10.86□□□□□ -0.67
SREBF1-206ENST00000423161 IGKV2D-28P01615 120 aa10.86□□□□□ -0.67
SREBF1-206ENST00000423161 PFN2P35080 140 aa10.86□□□□□ -0.67
SREBF1-206ENST00000423161 NDUFA6P56556 154 aa10.86□□□□□ -0.67
SREBF1-206ENST00000423161 IFITM2Q01629 132 aa10.86□□□□□ -0.67
SREBF1-206ENST00000423161 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
SREBF1-206ENST00000423161 A0A096LNJ9 63 aa10.84□□□□□ -0.67
SREBF1-206ENST00000423161 ZNF22P17026 224 aaPredicted RBP10.84□□□□□ -0.67
SREBF1-206ENST00000423161 KRTAP13-2Q52LG2 175 aa10.83□□□□□ -0.68
SREBF1-206ENST00000423161 COMMD7Q86VX2 200 aa10.83□□□□□ -0.68
SREBF1-206ENST00000423161 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.68
SREBF1-206ENST00000423161 VPREB1P12018 145 aa10.82□□□□□ -0.68
SREBF1-206ENST00000423161 SND1-IT1Q9HBX3 110 aa10.82□□□□□ -0.68
SREBF1-206ENST00000423161 ERG28Q9UKR5 140 aa10.82□□□□□ -0.68
SREBF1-206ENST00000423161 RHEBQ15382 184 aa10.81□□□□□ -0.68
SREBF1-206ENST00000423161 FAM229BQ4G0N7 80 aa10.81□□□□□ -0.68
SREBF1-206ENST00000423161 HBDP02042 147 aa10.8□□□□□ -0.68
SREBF1-206ENST00000423161 PRLHP81277 87 aa10.8□□□□□ -0.68
SREBF1-206ENST00000423161 C18orf32Q8TCD1 76 aa10.8□□□□□ -0.68
SREBF1-206ENST00000423161 URB1-AS1Q96HZ7 61 aa10.8□□□□□ -0.68
SREBF1-206ENST00000423161 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
SREBF1-206ENST00000423161 LINC00614P0C842 121 aa10.79□□□□□ -0.68
SREBF1-206ENST00000423161 COX17Q14061 63 aa10.79□□□□□ -0.68
SREBF1-206ENST00000423161 PMCHL1Q16048 86 aa10.79□□□□□ -0.68
SREBF1-206ENST00000423161 C10orf91Q5T1B1 145 aa10.79□□□□□ -0.68
SREBF1-206ENST00000423161 FAM19A1Q7Z5A9 133 aa10.79□□□□□ -0.68
SREBF1-206ENST00000423161 TMEM126AQ9H061 195 aa10.79□□□□□ -0.68
SREBF1-206ENST00000423161 TMEM238C9JI98 176 aa10.78□□□□□ -0.68
SREBF1-206ENST00000423161 RPL24P83731 157 aaKnown RBP10.78□□□□□ -0.68
SREBF1-206ENST00000423161 LINC00304Q8N9R0 145 aa10.78□□□□□ -0.68
SREBF1-206ENST00000423161 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
SREBF1-206ENST00000423161 C11orf86A6NJI1 115 aa10.77□□□□□ -0.69
SREBF1-206ENST00000423161 TMEM170BQ5T4T1 132 aa10.77□□□□□ -0.69
SREBF1-206ENST00000423161 IGKV2D-26A0A0A0MRZ7 120 aa10.76□□□□□ -0.69
SREBF1-206ENST00000423161 BAGE3Q86Y29 109 aa10.76□□□□□ -0.69
SREBF1-206ENST00000423161 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
SREBF1-206ENST00000423161 M0R378 163 aa10.75□□□□□ -0.69
SREBF1-206ENST00000423161 SFTA2Q6UW10 78 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms