RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
VARS2-202ENST00000421263 CTDSP1Q9GZU7 261 aa11.34□□□□□ -0.59
VARS2-202ENST00000421263 TOMM6Q96B49 74 aa11.33□□□□□ -0.6
VARS2-202ENST00000421263 C22orf24Q9Y442 160 aa11.33□□□□□ -0.6
VARS2-202ENST00000421263 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
VARS2-202ENST00000421263 ZNF861PO60384 105 aa11.31□□□□□ -0.6
VARS2-202ENST00000421263 F8VRH5 84 aa11.3□□□□□ -0.6
VARS2-202ENST00000421263 CLLU1Q5K131 121 aa11.3□□□□□ -0.6
VARS2-202ENST00000421263 ERASQ7Z444 233 aa11.3□□□□□ -0.6
VARS2-202ENST00000421263 XAGE1AQ9HD64 81 aa11.3□□□□□ -0.6
VARS2-202ENST00000421263 CARHSP1Q9Y2V2 147 aaKnown RBP11.3□□□□□ -0.6
VARS2-202ENST00000421263 NUPR1O60356 82 aa11.29□□□□□ -0.6
VARS2-202ENST00000421263 KIAA1644Q3SXP7 199 aa11.29□□□□□ -0.6
VARS2-202ENST00000421263 GEMIN7Q9H840 131 aaKnown RBP11.29□□□□□ -0.6
VARS2-202ENST00000421263 RPL13AP40429 203 aaKnown RBP11.28□□□□□ -0.6
VARS2-202ENST00000421263 LBHQ53QV2 105 aaPredicted RBP11.28□□□□□ -0.6
VARS2-202ENST00000421263 TP73-AS1Q9UF72 201 aa11.28□□□□□ -0.6
VARS2-202ENST00000421263 CXCL5P42830 114 aa11.27□□□□□ -0.61
VARS2-202ENST00000421263 TRAV9-1A0A075B6T8 112 aa11.26□□□□□ -0.61
VARS2-202ENST00000421263 LINC01546A6NGU7 62 aa11.26□□□□□ -0.61
VARS2-202ENST00000421263 ADCYAP1P18509 176 aa11.26□□□□□ -0.61
VARS2-202ENST00000421263 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
VARS2-202ENST00000421263 TINCRA0A1B0GVN0 87 aa11.25□□□□□ -0.61
VARS2-202ENST00000421263 SMIM1B2RUZ4 78 aa11.25□□□□□ -0.61
VARS2-202ENST00000421263 PDZD11Q5EBL8 140 aa11.25□□□□□ -0.61
VARS2-202ENST00000421263 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
VARS2-202ENST00000421263 LINC01549A6NIU2 74 aa11.24□□□□□ -0.61
VARS2-202ENST00000421263 UQCC3Q6UW78 93 aa11.24□□□□□ -0.61
VARS2-202ENST00000421263 MRPL55Q7Z7F7 128 aaKnown RBP11.24□□□□□ -0.61
VARS2-202ENST00000421263 TMEM218A2RU14 115 aa11.23□□□□□ -0.61
VARS2-202ENST00000421263 COX7B2Q8TF08 81 aa11.22□□□□□ -0.61
VARS2-202ENST00000421263 GNB1LQ9BYB4 327 aa11.22□□□□□ -0.61
VARS2-202ENST00000421263 CST9LQ9H4G1 147 aa11.22□□□□□ -0.61
VARS2-202ENST00000421263 BCE1O60756 84 aa11.21□□□□□ -0.61
VARS2-202ENST00000421263 LINC00167Q96N53 147 aa11.21□□□□□ -0.61
VARS2-202ENST00000421263 RPL28P46779 137 aaKnown RBP11.19□□□□□ -0.62
VARS2-202ENST00000421263 IGLV5-37A0A075B6J1 123 aa11.18□□□□□ -0.62
VARS2-202ENST00000421263 PMVKQ15126 192 aa11.18□□□□□ -0.62
VARS2-202ENST00000421263 IFITM2Q01629 132 aa11.17□□□□□ -0.62
VARS2-202ENST00000421263 PRR4Q16378 134 aa11.17□□□□□ -0.62
VARS2-202ENST00000421263 SEC11CQ9BY50 192 aa11.17□□□□□ -0.62
VARS2-202ENST00000421263 MRPL18Q9H0U6 180 aaKnown RBP11.17□□□□□ -0.62
VARS2-202ENST00000421263 MUC2Q02817 5179 aa11.16□□□□□ -0.62
VARS2-202ENST00000421263 RPL37AP8A6NKH3 93 aa11.16□□□□□ -0.62
VARS2-202ENST00000421263 SPINK8P0C7L1 97 aa11.16□□□□□ -0.62
VARS2-202ENST00000421263 COX19Q49B96 90 aa11.16□□□□□ -0.62
VARS2-202ENST00000421263 A0A087X002 238 aa11.15□□□□□ -0.62
VARS2-202ENST00000421263 S100PP25815 95 aa11.15□□□□□ -0.62
VARS2-202ENST00000421263 RAB5BP61020 215 aa11.15□□□□□ -0.62
VARS2-202ENST00000421263 KRTAP13-1Q8IUC0 172 aa11.14□□□□□ -0.63
VARS2-202ENST00000421263 CRYGAP11844 174 aa11.12□□□□□ -0.63
VARS2-202ENST00000421263 FA2HQ7L5A8 372 aa11.12□□□□□ -0.63
VARS2-202ENST00000421263 IGLV5-39A0A0G2JS06 123 aa11.11□□□□□ -0.63
VARS2-202ENST00000421263 GAGE10A6NGK3 116 aa11.11□□□□□ -0.63
VARS2-202ENST00000421263 H3BRM9 83 aa11.11□□□□□ -0.63
VARS2-202ENST00000421263 IGLC3P0DOY3 106 aa11.11□□□□□ -0.63
VARS2-202ENST00000421263 FABP9Q0Z7S8 132 aa11.11□□□□□ -0.63
VARS2-202ENST00000421263 A0A096LNJ9 63 aa11.1□□□□□ -0.63
VARS2-202ENST00000421263 TSPAN13O95857 204 aa11.1□□□□□ -0.63
VARS2-202ENST00000421263 C10orf91Q5T1B1 145 aa11.1□□□□□ -0.63
VARS2-202ENST00000421263 TYMSOSQ8TAI1 123 aa11.1□□□□□ -0.63
VARS2-202ENST00000421263 SMCO4Q9NRQ5 59 aa11.1□□□□□ -0.63
VARS2-202ENST00000421263 ATP5LO75964 103 aa11.09□□□□□ -0.63
VARS2-202ENST00000421263 NKAPP1Q8N9T2 125 aa11.09□□□□□ -0.63
VARS2-202ENST00000421263 COMMD7Q86VX2 200 aa11.08□□□□□ -0.64
VARS2-202ENST00000421263 URB1-AS1Q96HZ7 61 aa11.08□□□□□ -0.64
VARS2-202ENST00000421263 ANAPC11Q9NYG5 84 aa11.08□□□□□ -0.64
VARS2-202ENST00000421263 KRTAP13-2Q52LG2 175 aa11.07□□□□□ -0.64
VARS2-202ENST00000421263 SCO1O75880 301 aa11.06□□□□□ -0.64
VARS2-202ENST00000421263 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
VARS2-202ENST00000421263 PFN2P35080 140 aa11.06□□□□□ -0.64
VARS2-202ENST00000421263 UBE2AP49459 152 aa11.06□□□□□ -0.64
VARS2-202ENST00000421263 RHEBQ15382 184 aa11.06□□□□□ -0.64
VARS2-202ENST00000421263 LINC00614P0C842 121 aa11.05□□□□□ -0.64
VARS2-202ENST00000421263 VPREB1P12018 145 aa11.05□□□□□ -0.64
VARS2-202ENST00000421263 FAM229BQ4G0N7 80 aa11.05□□□□□ -0.64
VARS2-202ENST00000421263 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
VARS2-202ENST00000421263 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
VARS2-202ENST00000421263 COX17Q14061 63 aa11.04□□□□□ -0.64
VARS2-202ENST00000421263 C18orf32Q8TCD1 76 aa11.04□□□□□ -0.64
VARS2-202ENST00000421263 SND1-IT1Q9HBX3 110 aa11.04□□□□□ -0.64
VARS2-202ENST00000421263 NDUFA6P56556 154 aa11.03□□□□□ -0.64
VARS2-202ENST00000421263 RPS10P5Q9NQ39 176 aa11.03□□□□□ -0.64
VARS2-202ENST00000421263 ERG28Q9UKR5 140 aa11.03□□□□□ -0.64
VARS2-202ENST00000421263 HBDP02042 147 aa11.01□□□□□ -0.65
VARS2-202ENST00000421263 TMEM126AQ9H061 195 aa11.01□□□□□ -0.65
VARS2-202ENST00000421263 TRAPPC1Q9Y5R8 145 aa11.01□□□□□ -0.65
VARS2-202ENST00000421263 RPL24P83731 157 aaKnown RBP11□□□□□ -0.65
VARS2-202ENST00000421263 Q8NDZ9 215 aa11□□□□□ -0.65
VARS2-202ENST00000421263 C11orf86A6NJI1 115 aa10.99□□□□□ -0.65
VARS2-202ENST00000421263 M0R378 163 aa10.99□□□□□ -0.65
VARS2-202ENST00000421263 TMEM238C9JI98 176 aa10.98□□□□□ -0.65
VARS2-202ENST00000421263 PRLHP81277 87 aa10.98□□□□□ -0.65
VARS2-202ENST00000421263 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
VARS2-202ENST00000421263 SFTA2Q6UW10 78 aa10.98□□□□□ -0.65
VARS2-202ENST00000421263 FAM19A1Q7Z5A9 133 aa10.98□□□□□ -0.65
VARS2-202ENST00000421263 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
VARS2-202ENST00000421263 ZNF625Q96I27 306 aaPredicted RBP10.98□□□□□ -0.65
VARS2-202ENST00000421263 CTAG1AP78358 180 aa10.97□□□□□ -0.65
VARS2-202ENST00000421263 LINC00304Q8N9R0 145 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms