RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 GEMIN7Q9H840 131 aaKnown RBP8.6□□□□□ -1.03
NOD1-205ENST00000419799 MRPL35Q9NZE8 188 aaKnown RBP8.6□□□□□ -1.03
NOD1-205ENST00000419799 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
NOD1-205ENST00000419799 A0A1W2PNN7 141 aa8.59□□□□□ -1.03
NOD1-205ENST00000419799 LINC01546A6NGU7 62 aa8.59□□□□□ -1.03
NOD1-205ENST00000419799 PRSS2P07478 247 aa8.59□□□□□ -1.03
NOD1-205ENST00000419799 KIAA0087Q14695 138 aa8.59□□□□□ -1.03
NOD1-205ENST00000419799 HERVK_113P63121 156 aa8.58□□□□□ -1.04
NOD1-205ENST00000419799 PMCHL1Q16048 86 aa8.58□□□□□ -1.04
NOD1-205ENST00000419799 RNF151Q2KHN1 245 aa8.58□□□□□ -1.04
NOD1-205ENST00000419799 GAGE2EQ4V326 116 aa8.58□□□□□ -1.04
NOD1-205ENST00000419799 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
NOD1-205ENST00000419799 C18orf32Q8TCD1 76 aa8.58□□□□□ -1.04
NOD1-205ENST00000419799 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
NOD1-205ENST00000419799 GAGE2DQ9UEU5 116 aa8.58□□□□□ -1.04
NOD1-205ENST00000419799 CDKN2A-AS1Q9UH64 79 aa8.58□□□□□ -1.04
NOD1-205ENST00000419799 F8WDY8 70 aa8.57□□□□□ -1.04
NOD1-205ENST00000419799 Q6ZRP5 223 aa8.57□□□□□ -1.04
NOD1-205ENST00000419799 SLC7A5P1Q8MH63 180 aa8.57□□□□□ -1.04
NOD1-205ENST00000419799 LINC00469Q8N7U9 141 aa8.57□□□□□ -1.04
NOD1-205ENST00000419799 KRTAP9-2Q9BYQ4 174 aa8.57□□□□□ -1.04
NOD1-205ENST00000419799 NDUFA6P56556 154 aa8.56□□□□□ -1.04
NOD1-205ENST00000419799 SEC11AP67812 179 aa8.56□□□□□ -1.04
NOD1-205ENST00000419799 PRR3P79522 188 aaKnown RBP8.56□□□□□ -1.04
NOD1-205ENST00000419799 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
NOD1-205ENST00000419799 FAM19A3Q7Z5A8 133 aa8.56□□□□□ -1.04
NOD1-205ENST00000419799 CBLN2Q8IUK8 224 aa8.56□□□□□ -1.04
NOD1-205ENST00000419799 LINC01561Q8N1V8 128 aa8.56□□□□□ -1.04
NOD1-205ENST00000419799 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
NOD1-205ENST00000419799 FAM168BA1KXE4 195 aa8.55□□□□□ -1.04
NOD1-205ENST00000419799 LINC00614P0C842 121 aa8.55□□□□□ -1.04
NOD1-205ENST00000419799 CKS1BP61024 79 aa8.55□□□□□ -1.04
NOD1-205ENST00000419799 REG3GQ6UW15 175 aa8.55□□□□□ -1.04
NOD1-205ENST00000419799 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
NOD1-205ENST00000419799 CST9LQ9H4G1 147 aa8.55□□□□□ -1.04
NOD1-205ENST00000419799 KRTAP9-6A0A140TA67 174 aa8.54□□□□□ -1.04
NOD1-205ENST00000419799 PMVKQ15126 192 aa8.54□□□□□ -1.04
NOD1-205ENST00000419799 SPINK6Q6UWN8 80 aa8.54□□□□□ -1.04
NOD1-205ENST00000419799 FAM19A5Q7Z5A7 132 aaPredicted RBP8.54□□□□□ -1.04
NOD1-205ENST00000419799 YPEL4Q96NS1 127 aa8.54□□□□□ -1.04
NOD1-205ENST00000419799 A0A096LNJ9 63 aa8.53□□□□□ -1.04
NOD1-205ENST00000419799 TRBV30A0A0K0K1B3 111 aa8.53□□□□□ -1.04
NOD1-205ENST00000419799 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
NOD1-205ENST00000419799 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
NOD1-205ENST00000419799 SPINK8P0C7L1 97 aa8.53□□□□□ -1.04
NOD1-205ENST00000419799 Q8IZM0 81 aa8.53□□□□□ -1.04
NOD1-205ENST00000419799 HBDP02042 147 aa8.52□□□□□ -1.05
NOD1-205ENST00000419799 TLX1NBP0CAT3 122 aa8.52□□□□□ -1.05
NOD1-205ENST00000419799 SMIM1B2RUZ4 78 aa8.51□□□□□ -1.05
NOD1-205ENST00000419799 RAB5BP61020 215 aa8.51□□□□□ -1.05
NOD1-205ENST00000419799 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
NOD1-205ENST00000419799 COX7B2Q8TF08 81 aa8.5□□□□□ -1.05
NOD1-205ENST00000419799 SRSF9Q13242 221 aaKnown RBP eCLIP8.49□□□□□ -1.05
NOD1-205ENST00000419799 PDZD11Q5EBL8 140 aa8.49□□□□□ -1.05
NOD1-205ENST00000419799 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
NOD1-205ENST00000419799 IGLV5-45A0A087WSX0 123 aa8.48□□□□□ -1.05
NOD1-205ENST00000419799 F8VRH5 84 aa8.48□□□□□ -1.05
NOD1-205ENST00000419799 C1orf137Q5JT78 98 aa8.48□□□□□ -1.05
NOD1-205ENST00000419799 XAGE1AQ9HD64 81 aa8.48□□□□□ -1.05
NOD1-205ENST00000419799 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
NOD1-205ENST00000419799 H3BRM9 83 aa8.47□□□□□ -1.05
NOD1-205ENST00000419799 M0QXV9 152 aa8.47□□□□□ -1.05
NOD1-205ENST00000419799 BAGE3Q86Y29 109 aa8.47□□□□□ -1.05
NOD1-205ENST00000419799 KRTAP11-1Q8IUC1 163 aa8.47□□□□□ -1.05
NOD1-205ENST00000419799 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
NOD1-205ENST00000419799 ATP5LO75964 103 aa8.46□□□□□ -1.06
NOD1-205ENST00000419799 TRGC2P03986 189 aa8.46□□□□□ -1.06
NOD1-205ENST00000419799 IGLC3P0DOY3 106 aa8.46□□□□□ -1.06
NOD1-205ENST00000419799 CXCL5P42830 114 aa8.46□□□□□ -1.06
NOD1-205ENST00000419799 UBE2BP63146 152 aa8.46□□□□□ -1.06
NOD1-205ENST00000419799 LPAP08519 4548 aa8.45□□□□□ -1.06
NOD1-205ENST00000419799 ZNF22P17026 224 aaPredicted RBP8.45□□□□□ -1.06
NOD1-205ENST00000419799 C11orf86A6NJI1 115 aa8.44□□□□□ -1.06
NOD1-205ENST00000419799 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
NOD1-205ENST00000419799 FAM19A2Q8N3H0 131 aa8.44□□□□□ -1.06
NOD1-205ENST00000419799 CHCHD1Q96BP2 118 aaKnown RBP8.44□□□□□ -1.06
NOD1-205ENST00000419799 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
NOD1-205ENST00000419799 H0Y8G0 127 aa8.42□□□□□ -1.06
NOD1-205ENST00000419799 HSBP1O75506 76 aa8.42□□□□□ -1.06
NOD1-205ENST00000419799 IFI27L1Q96BM0 104 aa8.42□□□□□ -1.06
NOD1-205ENST00000419799 PFN2P35080 140 aa8.41□□□□□ -1.06
NOD1-205ENST00000419799 C22orf24Q9Y442 160 aa8.41□□□□□ -1.06
NOD1-205ENST00000419799 IGLV5-39A0A0G2JS06 123 aa8.4□□□□□ -1.06
NOD1-205ENST00000419799 A0A0U1RQV1 116 aa8.4□□□□□ -1.06
NOD1-205ENST00000419799 SCO1O75880 301 aa8.4□□□□□ -1.06
NOD1-205ENST00000419799 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.06
NOD1-205ENST00000419799 COLCA2A8K830 154 aa8.39□□□□□ -1.07
NOD1-205ENST00000419799 SERF1AO75920 110 aa8.39□□□□□ -1.07
NOD1-205ENST00000419799 IGLV7-43P04211 117 aa8.39□□□□□ -1.07
NOD1-205ENST00000419799 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
NOD1-205ENST00000419799 GAGE10A6NGK3 116 aa8.37□□□□□ -1.07
NOD1-205ENST00000419799 NUPR1O60356 82 aa8.37□□□□□ -1.07
NOD1-205ENST00000419799 LINC00310P59036 64 aa8.37□□□□□ -1.07
NOD1-205ENST00000419799 RPL37AP8A6NKH3 93 aa8.36□□□□□ -1.07
NOD1-205ENST00000419799 FABP4P15090 132 aa8.36□□□□□ -1.07
NOD1-205ENST00000419799 LBHQ53QV2 105 aaPredicted RBP8.36□□□□□ -1.07
NOD1-205ENST00000419799 TMEM223A0PJW6 202 aa8.35□□□□□ -1.07
NOD1-205ENST00000419799 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
NOD1-205ENST00000419799 MRPL55Q7Z7F7 128 aaKnown RBP8.35□□□□□ -1.07
NOD1-205ENST00000419799 ERG28Q9UKR5 140 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms