RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
HMGA1P6-201ENST00000418454 RNF151Q2KHN1 245 aa6.74□□□□□ -1.33
HMGA1P6-201ENST00000418454 MEIG1Q5JSS6 88 aa6.74□□□□□ -1.33
HMGA1P6-201ENST00000418454 COL5A1-AS1Q5SY13 56 aa6.74□□□□□ -1.33
HMGA1P6-201ENST00000418454 ARL17AQ8IVW1 177 aa6.74□□□□□ -1.33
HMGA1P6-201ENST00000418454 NTN5Q8WTR8 489 aaPredicted RBP6.74□□□□□ -1.33
HMGA1P6-201ENST00000418454 LITAFQ99732 161 aa6.74□□□□□ -1.33
HMGA1P6-201ENST00000418454 SNHG12Q9BXW3 62 aa6.74□□□□□ -1.33
HMGA1P6-201ENST00000418454 DYNC2H1Q8NCM8 4307 aaKnown RBP6.74□□□□□ -1.33
HMGA1P6-201ENST00000418454 TRBV30A0A0K0K1B3 111 aa6.73□□□□□ -1.33
HMGA1P6-201ENST00000418454 NBDYA0A0U1RRE5 68 aa6.73□□□□□ -1.33
HMGA1P6-201ENST00000418454 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
HMGA1P6-201ENST00000418454 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
HMGA1P6-201ENST00000418454 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.72□□□□□ -1.33
HMGA1P6-201ENST00000418454 A0A1B0GWB2 263 aa6.72□□□□□ -1.33
HMGA1P6-201ENST00000418454 SPAG11BQ08648 103 aa6.72□□□□□ -1.33
HMGA1P6-201ENST00000418454 C14orf177Q52M58 125 aa6.72□□□□□ -1.33
HMGA1P6-201ENST00000418454 HINT1P49773 126 aaPredicted RBP6.71□□□□□ -1.34
HMGA1P6-201ENST00000418454 CASC10Q5T4H9 136 aa6.71□□□□□ -1.34
HMGA1P6-201ENST00000418454 ERG28Q9UKR5 140 aa6.71□□□□□ -1.34
HMGA1P6-201ENST00000418454 STAB2Q8WWQ8 2551 aa6.7□□□□□ -1.34
HMGA1P6-201ENST00000418454 SMIM13P0DJ93 91 aa6.7□□□□□ -1.34
HMGA1P6-201ENST00000418454 ADAMTSL4-AS1Q5T5F5 129 aa6.69□□□□□ -1.34
HMGA1P6-201ENST00000418454 MUSTN1Q8IVN3 82 aa6.69□□□□□ -1.34
HMGA1P6-201ENST00000418454 C15orf56Q8N910 161 aa6.69□□□□□ -1.34
HMGA1P6-201ENST00000418454 PKIGQ9Y2B9 76 aa6.69□□□□□ -1.34
HMGA1P6-201ENST00000418454 PRKDCP78527 4128 aaKnown RBP6.69□□□□□ -1.34
HMGA1P6-201ENST00000418454 A0A0B4J2C4 111 aa6.68□□□□□ -1.34
HMGA1P6-201ENST00000418454 NDUFC2O95298 119 aa6.68□□□□□ -1.34
HMGA1P6-201ENST00000418454 TLX1NBP0CAT3 122 aa6.68□□□□□ -1.34
HMGA1P6-201ENST00000418454 LINC00158P58513 81 aa6.68□□□□□ -1.34
HMGA1P6-201ENST00000418454 Q6ZR54 194 aa6.68□□□□□ -1.34
HMGA1P6-201ENST00000418454 LINC00308Q8TCZ7 52 aa6.68□□□□□ -1.34
HMGA1P6-201ENST00000418454 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
HMGA1P6-201ENST00000418454 Q9HAA7 133 aa6.68□□□□□ -1.34
HMGA1P6-201ENST00000418454 FXYD2P54710 66 aa6.67□□□□□ -1.34
HMGA1P6-201ENST00000418454 DNAH7Q8WXX0 4024 aa6.67□□□□□ -1.34
HMGA1P6-201ENST00000418454 FBN3Q75N90 2809 aa6.67□□□□□ -1.34
HMGA1P6-201ENST00000418454 USP17L23D6RBM5 183 aa6.66□□□□□ -1.34
HMGA1P6-201ENST00000418454 EREGO14944 169 aa6.66□□□□□ -1.34
HMGA1P6-201ENST00000418454 PSCAO43653 123 aa6.66□□□□□ -1.34
HMGA1P6-201ENST00000418454 CNBPP62633 177 aaKnown RBP6.66□□□□□ -1.34
HMGA1P6-201ENST00000418454 SYCNQ0VAF6 134 aa6.66□□□□□ -1.34
HMGA1P6-201ENST00000418454 UNQ6190/PRO20217Q6UXQ8 127 aa6.66□□□□□ -1.34
HMGA1P6-201ENST00000418454 MIR7-3HGQ8N6C7 128 aa6.66□□□□□ -1.34
HMGA1P6-201ENST00000418454 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
HMGA1P6-201ENST00000418454 A4D1N5 150 aa6.65□□□□□ -1.34
HMGA1P6-201ENST00000418454 BATFQ16520 125 aa6.65□□□□□ -1.34
HMGA1P6-201ENST00000418454 C2orf82Q6UX34 121 aa6.65□□□□□ -1.34
HMGA1P6-201ENST00000418454 LINC00476Q8WZB0 136 aa6.65□□□□□ -1.34
HMGA1P6-201ENST00000418454 PRO1854Q9UHT4 67 aa6.65□□□□□ -1.34
HMGA1P6-201ENST00000418454 TRAV13-2A0A0B4J235 113 aa6.64□□□□□ -1.35
HMGA1P6-201ENST00000418454 NDUFC2-KCTD14E9PQ53 114 aa6.64□□□□□ -1.35
HMGA1P6-201ENST00000418454 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
HMGA1P6-201ENST00000418454 CFC1P0CG37 223 aa6.64□□□□□ -1.35
HMGA1P6-201ENST00000418454 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
HMGA1P6-201ENST00000418454 C6orf223Q8N319 242 aa6.64□□□□□ -1.35
HMGA1P6-201ENST00000418454 NHP2Q9NX24 153 aaKnown RBP6.64□□□□□ -1.35
HMGA1P6-201ENST00000418454 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
HMGA1P6-201ENST00000418454 C9orf118A6NHY6 69 aa6.63□□□□□ -1.35
HMGA1P6-201ENST00000418454 TAX1BP3O14907 124 aa6.63□□□□□ -1.35
HMGA1P6-201ENST00000418454 PFN2P35080 140 aa6.63□□□□□ -1.35
HMGA1P6-201ENST00000418454 RAB37Q96AX2 223 aa6.63□□□□□ -1.35
HMGA1P6-201ENST00000418454 TRBV10-2A0A0K0K1G8 114 aa6.62□□□□□ -1.35
HMGA1P6-201ENST00000418454 LRCOL1A6NCL2 159 aa6.62□□□□□ -1.35
HMGA1P6-201ENST00000418454 HIGD2BQ4VC39 106 aa6.62□□□□□ -1.35
HMGA1P6-201ENST00000418454 C10orf25Q5T742 122 aa6.62□□□□□ -1.35
HMGA1P6-201ENST00000418454 Q6ZRU5 148 aa6.62□□□□□ -1.35
HMGA1P6-201ENST00000418454 CARD19Q96LW7 228 aa6.62□□□□□ -1.35
HMGA1P6-201ENST00000418454 SND1-IT1Q9HBX3 110 aa6.62□□□□□ -1.35
HMGA1P6-201ENST00000418454 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
HMGA1P6-201ENST00000418454 CBY1Q9Y3M2 126 aa6.62□□□□□ -1.35
HMGA1P6-201ENST00000418454 CSMD3Q7Z407 3707 aa6.61□□□□□ -1.35
HMGA1P6-201ENST00000418454 C1orf134Q5TEV5 83 aa6.61□□□□□ -1.35
HMGA1P6-201ENST00000418454 LYRM7Q5U5X0 104 aa6.61□□□□□ -1.35
HMGA1P6-201ENST00000418454 LY6G6CO95867 125 aa6.6□□□□□ -1.35
HMGA1P6-201ENST00000418454 SOSTDC1Q6X4U4 206 aa6.6□□□□□ -1.35
HMGA1P6-201ENST00000418454 LOC107984640A0A0U1RRK4 108 aa6.59□□□□□ -1.35
HMGA1P6-201ENST00000418454 DAND5Q8N907 189 aa6.59□□□□□ -1.35
HMGA1P6-201ENST00000418454 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
HMGA1P6-201ENST00000418454 A0A0U1RRA0 63 aa6.58□□□□□ -1.36
HMGA1P6-201ENST00000418454 SLPIP03973 132 aa6.58□□□□□ -1.36
HMGA1P6-201ENST00000418454 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
HMGA1P6-201ENST00000418454 LINC00474Q9P2X8 69 aa6.58□□□□□ -1.36
HMGA1P6-201ENST00000418454 TRBV20-1A0A075B6N2 111 aa6.57□□□□□ -1.36
HMGA1P6-201ENST00000418454 COX6CP09669 75 aa6.57□□□□□ -1.36
HMGA1P6-201ENST00000418454 FABP2P12104 132 aa6.57□□□□□ -1.36
HMGA1P6-201ENST00000418454 C9orf116Q5BN46 136 aaPredicted RBP6.57□□□□□ -1.36
HMGA1P6-201ENST00000418454 Q8N814 137 aa6.57□□□□□ -1.36
HMGA1P6-201ENST00000418454 C9orf163Q8N9P6 203 aa6.57□□□□□ -1.36
HMGA1P6-201ENST00000418454 LINC00526Q96FQ7 95 aa6.57□□□□□ -1.36
HMGA1P6-201ENST00000418454 DNAH1Q9P2D7 4330 aa6.56□□□□□ -1.36
HMGA1P6-201ENST00000418454 IGLV5-37A0A075B6J1 123 aa6.56□□□□□ -1.36
HMGA1P6-201ENST00000418454 A0A087WTM6 91 aa6.56□□□□□ -1.36
HMGA1P6-201ENST00000418454 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
HMGA1P6-201ENST00000418454 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
HMGA1P6-201ENST00000418454 Q6ZRP5 223 aa6.56□□□□□ -1.36
HMGA1P6-201ENST00000418454 PGPEP1Q9NXJ5 209 aa6.56□□□□□ -1.36
HMGA1P6-201ENST00000418454 STARD9Q9P2P6 4700 aa6.56□□□□□ -1.36
HMGA1P6-201ENST00000418454 IGKV2-28A0A075B6P5 120 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms