RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
HLA-DMB-258ENST00000418107 HIST1H4GQ99525 98 aa8.86□□□□□ -0.99
HLA-DMB-258ENST00000418107 PRR34Q9NV39 138 aa8.86□□□□□ -0.99
HLA-DMB-258ENST00000418107 SRSF9Q13242 221 aaKnown RBP eCLIP8.86□□□□□ -0.99
HLA-DMB-258ENST00000418107 DNAH5Q8TE73 4624 aa8.85□□□□□ -0.99
HLA-DMB-258ENST00000418107 PRSS2P07478 247 aa8.85□□□□□ -0.99
HLA-DMB-258ENST00000418107 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
HLA-DMB-258ENST00000418107 HERC1Q15751 4861 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 C16orf90A8MZG2 172 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 APOMO95445 188 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 C6orf226Q5I0X4 101 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 UPK3BQ9BT76 320 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 C1orf43Q9BWL3 253 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 SNHG12Q9BXW3 62 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 Q9H8V8 135 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 Q9HAA7 133 aa8.84□□□□□ -0.99
HLA-DMB-258ENST00000418107 EREGO14944 169 aa8.83□□□□□ -1
HLA-DMB-258ENST00000418107 NDUFA1O15239 70 aa8.83□□□□□ -1
HLA-DMB-258ENST00000418107 GCSHP23434 173 aa8.83□□□□□ -1
HLA-DMB-258ENST00000418107 TNP2Q05952 138 aa8.83□□□□□ -1
HLA-DMB-258ENST00000418107 FOXI1Q12951 378 aa8.83□□□□□ -1
HLA-DMB-258ENST00000418107 CFAP161Q6P656 301 aa8.83□□□□□ -1
HLA-DMB-258ENST00000418107 C10orf126Q8N4M7 172 aa8.83□□□□□ -1
HLA-DMB-258ENST00000418107 ORAOV1Q8WV07 137 aa8.83□□□□□ -1
HLA-DMB-258ENST00000418107 A0A0J9YXY3 114 aa8.82□□□□□ -1
HLA-DMB-258ENST00000418107 CDK2AP2O75956 126 aa8.82□□□□□ -1
HLA-DMB-258ENST00000418107 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
HLA-DMB-258ENST00000418107 TAL2Q16559 108 aa8.82□□□□□ -1
HLA-DMB-258ENST00000418107 ZNF625Q96I27 306 aaPredicted RBP8.82□□□□□ -1
HLA-DMB-258ENST00000418107 TMEM238C9JI98 176 aa8.81□□□□□ -1
HLA-DMB-258ENST00000418107 PTTG1IPP53801 180 aa8.81□□□□□ -1
HLA-DMB-258ENST00000418107 HERV-K104P63124 156 aa8.81□□□□□ -1
HLA-DMB-258ENST00000418107 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
HLA-DMB-258ENST00000418107 BVES-AS1Q5T3Y7 98 aa8.81□□□□□ -1
HLA-DMB-258ENST00000418107 RMI2Q96E14 147 aa8.81□□□□□ -1
HLA-DMB-258ENST00000418107 CKS1BP61024 79 aa8.8□□□□□ -1
HLA-DMB-258ENST00000418107 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
HLA-DMB-258ENST00000418107 Q8IZM0 81 aa8.79□□□□□ -1
HLA-DMB-258ENST00000418107 CEND1Q8N111 149 aa8.79□□□□□ -1
HLA-DMB-258ENST00000418107 A6NDN8 102 aa8.78□□□□□ -1
HLA-DMB-258ENST00000418107 COL5A1-AS1Q5SY13 56 aa8.78□□□□□ -1
HLA-DMB-258ENST00000418107 SFTA2Q6UW10 78 aa8.78□□□□□ -1
HLA-DMB-258ENST00000418107 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
HLA-DMB-258ENST00000418107 A0A0U1RRA0 63 aa8.77□□□□□ -1.01
HLA-DMB-258ENST00000418107 K7EP13 123 aa8.77□□□□□ -1.01
HLA-DMB-258ENST00000418107 TIMM17BO60830 172 aa8.77□□□□□ -1.01
HLA-DMB-258ENST00000418107 SPAG11BQ08648 103 aa8.77□□□□□ -1.01
HLA-DMB-258ENST00000418107 LBHQ53QV2 105 aaPredicted RBP8.77□□□□□ -1.01
HLA-DMB-258ENST00000418107 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
HLA-DMB-258ENST00000418107 CXCL5P42830 114 aa8.76□□□□□ -1.01
HLA-DMB-258ENST00000418107 Q8N1X5 172 aa8.76□□□□□ -1.01
HLA-DMB-258ENST00000418107 C6orf223Q8N319 242 aa8.76□□□□□ -1.01
HLA-DMB-258ENST00000418107 TMEM238LA0A1B0GVL6 79 aa8.75□□□□□ -1.01
HLA-DMB-258ENST00000418107 A6NJY4 79 aa8.75□□□□□ -1.01
HLA-DMB-258ENST00000418107 ZNF561-AS1K7EIQ3 104 aa8.75□□□□□ -1.01
HLA-DMB-258ENST00000418107 SMIM13P0DJ93 91 aa8.75□□□□□ -1.01
HLA-DMB-258ENST00000418107 FXYD2P54710 66 aa8.75□□□□□ -1.01
HLA-DMB-258ENST00000418107 TM2D2Q9BX73 214 aa8.75□□□□□ -1.01
HLA-DMB-258ENST00000418107 LINC00158P58513 81 aa8.74□□□□□ -1.01
HLA-DMB-258ENST00000418107 C2orf82Q6UX34 121 aa8.74□□□□□ -1.01
HLA-DMB-258ENST00000418107 Q6ZVH6 145 aa8.74□□□□□ -1.01
HLA-DMB-258ENST00000418107 SPANXDQ9BXN6 97 aa8.74□□□□□ -1.01
HLA-DMB-258ENST00000418107 SPANXCQ9NY87 97 aa8.74□□□□□ -1.01
HLA-DMB-258ENST00000418107 NPC2P61916 151 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 RPL24P83731 157 aaKnown RBP8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 KIAA0087Q14695 138 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 TTC32Q5I0X7 151 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 ADAMTSL4-AS1Q5T5F5 129 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 MUSTN1Q8IVN3 82 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 COPS9Q8WXC6 57 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 NHP2Q9NX24 153 aaKnown RBP8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 PFN2P35080 140 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 HIGD2BQ4VC39 106 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 DAND5Q8N907 189 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 LINC00526Q96FQ7 95 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 LITAFQ99732 161 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 COX11Q9Y6N1 276 aa8.73□□□□□ -1.01
HLA-DMB-258ENST00000418107 FAT1Q14517 4588 aa8.72□□□□□ -1.01
HLA-DMB-258ENST00000418107 IFITM1P13164 125 aa8.72□□□□□ -1.01
HLA-DMB-258ENST00000418107 ERG28Q9UKR5 140 aa8.72□□□□□ -1.01
HLA-DMB-258ENST00000418107 PSCAO43653 123 aa8.71□□□□□ -1.02
HLA-DMB-258ENST00000418107 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
HLA-DMB-258ENST00000418107 RAB37Q96AX2 223 aa8.7□□□□□ -1.02
HLA-DMB-258ENST00000418107 CAMK2N2Q96S95 79 aa8.7□□□□□ -1.02
HLA-DMB-258ENST00000418107 A4D1N5 150 aa8.69□□□□□ -1.02
HLA-DMB-258ENST00000418107 KRTAP10-2P60368 255 aa8.69□□□□□ -1.02
HLA-DMB-258ENST00000418107 MIR7-3HGQ8N6C7 128 aa8.69□□□□□ -1.02
HLA-DMB-258ENST00000418107 C15orf56Q8N910 161 aa8.69□□□□□ -1.02
HLA-DMB-258ENST00000418107 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
HLA-DMB-258ENST00000418107 NTN5Q8WTR8 489 aaPredicted RBP8.69□□□□□ -1.02
HLA-DMB-258ENST00000418107 KRTAP1-5Q9BYS1 174 aa8.69□□□□□ -1.02
HLA-DMB-258ENST00000418107 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.68□□□□□ -1.02
HLA-DMB-258ENST00000418107 K7ERJ3 54 aa8.68□□□□□ -1.02
HLA-DMB-258ENST00000418107 C2orf48Q96LS8 159 aa8.68□□□□□ -1.02
HLA-DMB-258ENST00000418107 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
HLA-DMB-258ENST00000418107 USP17L23D6RBM5 183 aa8.67□□□□□ -1.02
HLA-DMB-258ENST00000418107 COX17Q14061 63 aa8.67□□□□□ -1.02
HLA-DMB-258ENST00000418107 C9orf116Q5BN46 136 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms