RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ENHOQ6UWT2 76 aa11.4□□□□□ -0.59
SSBP3-205ENST00000417664 LINC00308Q8TCZ7 52 aa11.4□□□□□ -0.59
SSBP3-205ENST00000417664 SPCS1Q9Y6A9 102 aa11.4□□□□□ -0.59
SSBP3-205ENST00000417664 IGLV10-54A0A075B6I4 117 aa11.39□□□□□ -0.59
SSBP3-205ENST00000417664 IGHV3-33P01772 117 aa11.39□□□□□ -0.59
SSBP3-205ENST00000417664 LYRM7Q5U5X0 104 aa11.39□□□□□ -0.59
SSBP3-205ENST00000417664 TSPAN13O95857 204 aa11.38□□□□□ -0.59
SSBP3-205ENST00000417664 KLK5Q9Y337 293 aaPredicted RBP11.37□□□□□ -0.59
SSBP3-205ENST00000417664 GAGE12HA6NDE8 117 aa11.36□□□□□ -0.59
SSBP3-205ENST00000417664 UBE2WQ96B02 151 aa11.36□□□□□ -0.59
SSBP3-205ENST00000417664 CKS1BP61024 79 aa11.36□□□□□ -0.59
SSBP3-205ENST00000417664 KIAA0087Q14695 138 aa11.36□□□□□ -0.59
SSBP3-205ENST00000417664 CFAP161Q6P656 301 aa11.36□□□□□ -0.59
SSBP3-205ENST00000417664 DAND5Q8N907 189 aa11.36□□□□□ -0.59
SSBP3-205ENST00000417664 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
SSBP3-205ENST00000417664 NHLRC4P0CG21 123 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-205ENST00000417664 DNAH10OSP0CZ25 163 aa11.34□□□□□ -0.59
SSBP3-205ENST00000417664 A0A0U1RRA0 63 aa11.33□□□□□ -0.6
SSBP3-205ENST00000417664 EIF4EBP3O60516 100 aaPredicted RBP11.33□□□□□ -0.6
SSBP3-205ENST00000417664 CCL18P55774 89 aa11.33□□□□□ -0.6
SSBP3-205ENST00000417664 NPC2P61916 151 aa11.33□□□□□ -0.6
SSBP3-205ENST00000417664 HUWE1Q7Z6Z7 4374 aaKnown RBP11.33□□□□□ -0.6
SSBP3-205ENST00000417664 LINC00158P58513 81 aa11.33□□□□□ -0.6
SSBP3-205ENST00000417664 COX17Q14061 63 aa11.33□□□□□ -0.6
SSBP3-205ENST00000417664 MIR7-3HGQ8N6C7 128 aa11.33□□□□□ -0.6
SSBP3-205ENST00000417664 SOSTDC1Q6X4U4 206 aa11.31□□□□□ -0.6
SSBP3-205ENST00000417664 TRBV20-1A0A075B6N2 111 aa11.3□□□□□ -0.6
SSBP3-205ENST00000417664 MUC7Q8TAX7 377 aa11.3□□□□□ -0.6
SSBP3-205ENST00000417664 LOC107984156A0A0G2JMH3 177 aa11.3□□□□□ -0.6
SSBP3-205ENST00000417664 SPAG11BQ08648 103 aa11.3□□□□□ -0.6
SSBP3-205ENST00000417664 ARL17AQ8IVW1 177 aa11.3□□□□□ -0.6
SSBP3-205ENST00000417664 UPK3BQ9BT76 320 aa11.3□□□□□ -0.6
SSBP3-205ENST00000417664 LINC00588Q9Y4M8 146 aa11.3□□□□□ -0.6
SSBP3-205ENST00000417664 TRBV30A0A0K0K1B3 111 aa11.29□□□□□ -0.6
SSBP3-205ENST00000417664 Q1RN00 199 aa11.28□□□□□ -0.6
SSBP3-205ENST00000417664 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
SSBP3-205ENST00000417664 C2orf82Q6UX34 121 aa11.28□□□□□ -0.6
SSBP3-205ENST00000417664 C1orf43Q9BWL3 253 aa11.28□□□□□ -0.6
SSBP3-205ENST00000417664 PFN2P35080 140 aa11.27□□□□□ -0.6
SSBP3-205ENST00000417664 PSMB2P49721 201 aa11.27□□□□□ -0.6
SSBP3-205ENST00000417664 KRTAP21-3Q3LHN1 58 aa11.27□□□□□ -0.6
SSBP3-205ENST00000417664 SCGB1C2P0DMR2 95 aa11.27□□□□□ -0.61
SSBP3-205ENST00000417664 SND1-IT1Q9HBX3 110 aa11.26□□□□□ -0.61
SSBP3-205ENST00000417664 GVQW2A0A096LPI5 108 aaPredicted RBP11.25□□□□□ -0.61
SSBP3-205ENST00000417664 TRAV13-2A0A0B4J235 113 aa11.25□□□□□ -0.61
SSBP3-205ENST00000417664 H7C2G1 150 aa11.25□□□□□ -0.61
SSBP3-205ENST00000417664 COX6CP09669 75 aa11.25□□□□□ -0.61
SSBP3-205ENST00000417664 RPL13AP40429 203 aaKnown RBP11.25□□□□□ -0.61
SSBP3-205ENST00000417664 F8W1H4 67 aa11.24□□□□□ -0.61
SSBP3-205ENST00000417664 H3BMG7 143 aa11.24□□□□□ -0.61
SSBP3-205ENST00000417664 F8WDY8 70 aa11.24□□□□□ -0.61
SSBP3-205ENST00000417664 NTN5Q8WTR8 489 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-205ENST00000417664 ZNF561-AS1K7EIQ3 104 aa11.22□□□□□ -0.61
SSBP3-205ENST00000417664 IGKV2D-24A0A075B6R9 120 aa11.21□□□□□ -0.61
SSBP3-205ENST00000417664 TRIAP1O43715 76 aa11.21□□□□□ -0.61
SSBP3-205ENST00000417664 RMI2Q96E14 147 aa11.21□□□□□ -0.61
SSBP3-205ENST00000417664 TCL1BO95988 128 aa11.2□□□□□ -0.62
SSBP3-205ENST00000417664 UNQ6190/PRO20217Q6UXQ8 127 aa11.2□□□□□ -0.62
SSBP3-205ENST00000417664 C2orf48Q96LS8 159 aa11.2□□□□□ -0.62
SSBP3-205ENST00000417664 DNAH9Q9NYC9 4486 aa11.2□□□□□ -0.62
SSBP3-205ENST00000417664 NDUFC2O95298 119 aa11.2□□□□□ -0.62
SSBP3-205ENST00000417664 C6orf223Q8N319 242 aa11.2□□□□□ -0.62
SSBP3-205ENST00000417664 STAB2Q8WWQ8 2551 aa11.18□□□□□ -0.62
SSBP3-205ENST00000417664 IGKV2-28A0A075B6P5 120 aa11.18□□□□□ -0.62
SSBP3-205ENST00000417664 NUPR2A6NF83 97 aa11.18□□□□□ -0.62
SSBP3-205ENST00000417664 IGKV2D-28P01615 120 aa11.18□□□□□ -0.62
SSBP3-205ENST00000417664 ATXN8Q156A1 80 aa11.18□□□□□ -0.62
SSBP3-205ENST00000417664 C10orf25Q5T742 122 aa11.18□□□□□ -0.62
SSBP3-205ENST00000417664 APLNQ9ULZ1 77 aa11.18□□□□□ -0.62
SSBP3-205ENST00000417664 C15orf56Q8N910 161 aa11.17□□□□□ -0.62
SSBP3-205ENST00000417664 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
SSBP3-205ENST00000417664 PRO0461Q9UI25 63 aa11.17□□□□□ -0.62
SSBP3-205ENST00000417664 C9orf116Q5BN46 136 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-205ENST00000417664 LINC00337Q8N6G1 96 aa11.16□□□□□ -0.62
SSBP3-205ENST00000417664 Q9HAA7 133 aa11.16□□□□□ -0.62
SSBP3-205ENST00000417664 COL7A1Q02388 2944 aa11.16□□□□□ -0.62
SSBP3-205ENST00000417664 LINC00526Q96FQ7 95 aa11.15□□□□□ -0.62
SSBP3-205ENST00000417664 RPL28P46779 137 aaKnown RBP11.14□□□□□ -0.63
SSBP3-205ENST00000417664 HIGD2BQ4VC39 106 aa11.14□□□□□ -0.63
SSBP3-205ENST00000417664 C6orf48Q9UBA6 75 aa11.14□□□□□ -0.63
SSBP3-205ENST00000417664 M0QXV9 152 aa11.12□□□□□ -0.63
SSBP3-205ENST00000417664 WFDC2Q14508 124 aa11.12□□□□□ -0.63
SSBP3-205ENST00000417664 UBE2DNLQ8IWF7 75 aa11.12□□□□□ -0.63
SSBP3-205ENST00000417664 LST1O00453 97 aa11.11□□□□□ -0.63
SSBP3-205ENST00000417664 OCIAD2Q56VL3 154 aa11.11□□□□□ -0.63
SSBP3-205ENST00000417664 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
SSBP3-205ENST00000417664 Q6ZRU5 148 aa11.1□□□□□ -0.63
SSBP3-205ENST00000417664 K7ERU9 68 aa11.09□□□□□ -0.63
SSBP3-205ENST00000417664 TMEM126AQ9H061 195 aa11.09□□□□□ -0.63
SSBP3-205ENST00000417664 SYCNQ0VAF6 134 aa11.08□□□□□ -0.64
SSBP3-205ENST00000417664 RNF151Q2KHN1 245 aa11.08□□□□□ -0.64
SSBP3-205ENST00000417664 OR13C6PQ8NH95 151 aa11.08□□□□□ -0.64
SSBP3-205ENST00000417664 SMIM11BQ8TCY0 68 aa11.08□□□□□ -0.64
SSBP3-205ENST00000417664 LINC01600Q96MT4 127 aa11.08□□□□□ -0.64
SSBP3-205ENST00000417664 C9JAW5 83 aa11.08□□□□□ -0.64
SSBP3-205ENST00000417664 NDUFC2-KCTD14E9PQ53 114 aa11.08□□□□□ -0.64
SSBP3-205ENST00000417664 TRBV10-2A0A0K0K1G8 114 aa11.07□□□□□ -0.64
SSBP3-205ENST00000417664 H0YGX0 51 aa11.07□□□□□ -0.64
SSBP3-205ENST00000417664 SLC25A20O43772 301 aa11.07□□□□□ -0.64
SSBP3-205ENST00000417664 SMCPP49901 116 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms