RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 NPYP01303 97 aa4.29□□□□□ -1.72
CASP4-202ENST00000417440 SRP19P09132 144 aaKnown RBP4.29□□□□□ -1.72
CASP4-202ENST00000417440 RAB5AP20339 215 aa4.29□□□□□ -1.72
CASP4-202ENST00000417440 KIAA0087Q14695 138 aa4.29□□□□□ -1.72
CASP4-202ENST00000417440 ADIRFQ15847 76 aa4.29□□□□□ -1.72
CASP4-202ENST00000417440 MRPL54Q6P161 138 aaKnown RBP4.29□□□□□ -1.72
CASP4-202ENST00000417440 TOMM7Q9P0U1 55 aa4.29□□□□□ -1.72
CASP4-202ENST00000417440 CARHSP1Q9Y2V2 147 aaKnown RBP4.29□□□□□ -1.72
CASP4-202ENST00000417440 TRBV24-1A0A075B6N3 115 aa4.28□□□□□ -1.72
CASP4-202ENST00000417440 TRBV30A0A0K0K1B3 111 aa4.28□□□□□ -1.72
CASP4-202ENST00000417440 PRSS2P07478 247 aa4.28□□□□□ -1.72
CASP4-202ENST00000417440 IFI27P40305 119 aaPredicted RBP4.28□□□□□ -1.72
CASP4-202ENST00000417440 RPL23P62829 140 aaKnown RBP4.28□□□□□ -1.72
CASP4-202ENST00000417440 MRPS36P82909 103 aaKnown RBP4.28□□□□□ -1.72
CASP4-202ENST00000417440 FAM74A3Q4VXF1 159 aa4.28□□□□□ -1.72
CASP4-202ENST00000417440 LINC00242Q5T6M2 205 aa4.28□□□□□ -1.72
CASP4-202ENST00000417440 ZC2HC1BQ5TFG8 222 aa4.28□□□□□ -1.72
CASP4-202ENST00000417440 XAGE1AQ9HD64 81 aa4.28□□□□□ -1.72
CASP4-202ENST00000417440 C22orf24Q9Y442 160 aa4.28□□□□□ -1.72
CASP4-202ENST00000417440 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
CASP4-202ENST00000417440 IGLV4-3A0A075B6K6 122 aa4.27□□□□□ -1.73
CASP4-202ENST00000417440 LOC389332A0A1B0GUA5 103 aa4.27□□□□□ -1.73
CASP4-202ENST00000417440 SMIM27A0A1W2PRY6 76 aa4.27□□□□□ -1.73
CASP4-202ENST00000417440 F8W036 122 aa4.27□□□□□ -1.73
CASP4-202ENST00000417440 CKS1BP61024 79 aa4.27□□□□□ -1.73
CASP4-202ENST00000417440 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
CASP4-202ENST00000417440 ANAPC11Q9NYG5 84 aa4.27□□□□□ -1.73
CASP4-202ENST00000417440 A0A087X002 238 aa4.26□□□□□ -1.73
CASP4-202ENST00000417440 A0A1B0GW15 77 aa4.26□□□□□ -1.73
CASP4-202ENST00000417440 RPL37AP8A6NKH3 93 aa4.26□□□□□ -1.73
CASP4-202ENST00000417440 NUPR1O60356 82 aa4.26□□□□□ -1.73
CASP4-202ENST00000417440 RPL32P62910 135 aaKnown RBP4.26□□□□□ -1.73
CASP4-202ENST00000417440 LBHQ53QV2 105 aaPredicted RBP4.26□□□□□ -1.73
CASP4-202ENST00000417440 C6orf226Q5I0X4 101 aa4.26□□□□□ -1.73
CASP4-202ENST00000417440 TEX43Q6ZNM6 134 aa4.26□□□□□ -1.73
CASP4-202ENST00000417440 TMEM141Q96I45 108 aa4.26□□□□□ -1.73
CASP4-202ENST00000417440 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
CASP4-202ENST00000417440 S100A8P05109 93 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 CRYGAP11844 174 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 RPL28P46779 137 aaKnown RBP4.25□□□□□ -1.73
CASP4-202ENST00000417440 Q6ZN92 141 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 TMEM136Q6ZRR5 245 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 AKAP14Q86UN6 197 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 ORMDL3Q8N138 153 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 PRELID3AQ96N28 172 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 C2orf88Q9BSF0 95 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 ALKBH7Q9BT30 221 aaPredicted RBP4.25□□□□□ -1.73
CASP4-202ENST00000417440 VCX2Q9H322 139 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 NAT8Q9UHE5 227 aa4.25□□□□□ -1.73
CASP4-202ENST00000417440 C9JQL5 133 aa4.24□□□□□ -1.73
CASP4-202ENST00000417440 BCE1O60756 84 aa4.24□□□□□ -1.73
CASP4-202ENST00000417440 PPBPP02775 128 aa4.24□□□□□ -1.73
CASP4-202ENST00000417440 MRPL55Q7Z7F7 128 aaKnown RBP4.24□□□□□ -1.73
CASP4-202ENST00000417440 PYGO1Q9Y3Y4 419 aa4.24□□□□□ -1.73
CASP4-202ENST00000417440 A0A1B0GXF2 115 aa4.23□□□□□ -1.73
CASP4-202ENST00000417440 C2orf66Q6UXQ4 117 aa4.23□□□□□ -1.73
CASP4-202ENST00000417440 URB1-AS1Q96HZ7 61 aa4.23□□□□□ -1.73
CASP4-202ENST00000417440 CYSLTR1Q9Y271 337 aa4.23□□□□□ -1.73
CASP4-202ENST00000417440 UBE2AP49459 152 aa4.22□□□□□ -1.73
CASP4-202ENST00000417440 RAB5BP61020 215 aa4.22□□□□□ -1.73
CASP4-202ENST00000417440 PEA15Q15121 130 aa4.22□□□□□ -1.73
CASP4-202ENST00000417440 LINC00173Q6ZV60 143 aa4.22□□□□□ -1.73
CASP4-202ENST00000417440 Q8IZM0 81 aa4.22□□□□□ -1.73
CASP4-202ENST00000417440 LINC01561Q8N1V8 128 aa4.22□□□□□ -1.73
CASP4-202ENST00000417440 LINC00167Q96N53 147 aa4.22□□□□□ -1.73
CASP4-202ENST00000417440 MAP1LC3AQ9H492 121 aa4.22□□□□□ -1.73
CASP4-202ENST00000417440 F8VRH5 84 aa4.21□□□□□ -1.74
CASP4-202ENST00000417440 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
CASP4-202ENST00000417440 LINC00304Q8N9R0 145 aa4.21□□□□□ -1.74
CASP4-202ENST00000417440 AMELXQ99217 191 aa4.21□□□□□ -1.74
CASP4-202ENST00000417440 GEMIN7Q9H840 131 aaKnown RBP4.21□□□□□ -1.74
CASP4-202ENST00000417440 CDKN2A-AS1Q9UH64 79 aa4.21□□□□□ -1.74
CASP4-202ENST00000417440 IGLV7-46A0A075B6I9 117 aa4.2□□□□□ -1.74
CASP4-202ENST00000417440 SCO1O75880 301 aa4.2□□□□□ -1.74
CASP4-202ENST00000417440 HERVK_113P63121 156 aa4.2□□□□□ -1.74
CASP4-202ENST00000417440 Q8N8P6 123 aa4.2□□□□□ -1.74
CASP4-202ENST00000417440 TP73-AS1Q9UF72 201 aa4.2□□□□□ -1.74
CASP4-202ENST00000417440 IGKV2-28A0A075B6P5 120 aa4.19□□□□□ -1.74
CASP4-202ENST00000417440 IGKV2D-26A0A0A0MRZ7 120 aa4.19□□□□□ -1.74
CASP4-202ENST00000417440 IGIPA6NJ69 53 aa4.19□□□□□ -1.74
CASP4-202ENST00000417440 SCGB1D1O95968 90 aa4.19□□□□□ -1.74
CASP4-202ENST00000417440 IGKV2D-28P01615 120 aa4.19□□□□□ -1.74
CASP4-202ENST00000417440 ORMDL2Q53FV1 153 aa4.19□□□□□ -1.74
CASP4-202ENST00000417440 NKAPP1Q8N9T2 125 aa4.19□□□□□ -1.74
CASP4-202ENST00000417440 PRSS47A8MTI9 375 aa4.18□□□□□ -1.74
CASP4-202ENST00000417440 CXCL5P42830 114 aa4.18□□□□□ -1.74
CASP4-202ENST00000417440 SEC11AP67812 179 aa4.18□□□□□ -1.74
CASP4-202ENST00000417440 PRLHP81277 87 aa4.18□□□□□ -1.74
CASP4-202ENST00000417440 PNRC1Q12796 327 aaPredicted RBP4.18□□□□□ -1.74
CASP4-202ENST00000417440 ATP5L2Q7Z4Y8 100 aa4.18□□□□□ -1.74
CASP4-202ENST00000417440 COX7B2Q8TF08 81 aa4.18□□□□□ -1.74
CASP4-202ENST00000417440 LAMTOR2Q9Y2Q5 125 aa4.18□□□□□ -1.74
CASP4-202ENST00000417440 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
CASP4-202ENST00000417440 SMIM1B2RUZ4 78 aa4.17□□□□□ -1.74
CASP4-202ENST00000417440 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
CASP4-202ENST00000417440 SPINK8P0C7L1 97 aa4.17□□□□□ -1.74
CASP4-202ENST00000417440 PFN2P35080 140 aa4.17□□□□□ -1.74
CASP4-202ENST00000417440 PAPPA-AS1Q5QFB9 102 aa4.17□□□□□ -1.74
CASP4-202ENST00000417440 FAM19A3Q7Z5A8 133 aa4.17□□□□□ -1.74
CASP4-202ENST00000417440 FAM19A1Q7Z5A9 133 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms