RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 SEC11AP67812 179 aa10.88□□□□□ -0.67
CPNE1-210ENST00000416778 Q8IZM0 81 aa10.88□□□□□ -0.67
CPNE1-210ENST00000416778 TOMM7Q9P0U1 55 aa10.88□□□□□ -0.67
CPNE1-210ENST00000416778 CKS1BP61024 79 aa10.87□□□□□ -0.67
CPNE1-210ENST00000416778 SCGB3A1Q96QR1 104 aa10.87□□□□□ -0.67
CPNE1-210ENST00000416778 S100PP25815 95 aa10.86□□□□□ -0.67
CPNE1-210ENST00000416778 LRP2P98164 4655 aa10.86□□□□□ -0.67
CPNE1-210ENST00000416778 C10orf91Q5T1B1 145 aa10.86□□□□□ -0.67
CPNE1-210ENST00000416778 GEMIN7Q9H840 131 aaKnown RBP10.86□□□□□ -0.67
CPNE1-210ENST00000416778 COMMD7Q86VX2 200 aa10.85□□□□□ -0.67
CPNE1-210ENST00000416778 M0QXV9 152 aa10.84□□□□□ -0.67
CPNE1-210ENST00000416778 DIRC1Q969H9 104 aa10.84□□□□□ -0.67
CPNE1-210ENST00000416778 COX19Q49B96 90 aa10.83□□□□□ -0.68
CPNE1-210ENST00000416778 CST9LQ9H4G1 147 aa10.83□□□□□ -0.68
CPNE1-210ENST00000416778 TINCRA0A1B0GVN0 87 aa10.82□□□□□ -0.68
CPNE1-210ENST00000416778 LINC01549A6NIU2 74 aa10.82□□□□□ -0.68
CPNE1-210ENST00000416778 LINC00469Q8N7U9 141 aa10.82□□□□□ -0.68
CPNE1-210ENST00000416778 IGLV5-45A0A087WSX0 123 aa10.81□□□□□ -0.68
CPNE1-210ENST00000416778 F8VRH5 84 aa10.81□□□□□ -0.68
CPNE1-210ENST00000416778 H0Y9J4 135 aa10.81□□□□□ -0.68
CPNE1-210ENST00000416778 UBE2BP63146 152 aa10.81□□□□□ -0.68
CPNE1-210ENST00000416778 FABP9Q0Z7S8 132 aa10.81□□□□□ -0.68
CPNE1-210ENST00000416778 MRPL18Q9H0U6 180 aaKnown RBP10.81□□□□□ -0.68
CPNE1-210ENST00000416778 C22orf24Q9Y442 160 aa10.81□□□□□ -0.68
CPNE1-210ENST00000416778 SMIM1B2RUZ4 78 aa10.8□□□□□ -0.68
CPNE1-210ENST00000416778 PDZD11Q5EBL8 140 aa10.8□□□□□ -0.68
CPNE1-210ENST00000416778 XAGE1AQ9HD64 81 aa10.8□□□□□ -0.68
CPNE1-210ENST00000416778 CARHSP1Q9Y2V2 147 aaKnown RBP10.8□□□□□ -0.68
CPNE1-210ENST00000416778 PRR26Q8N8Z3 221 aa10.79□□□□□ -0.68
CPNE1-210ENST00000416778 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
CPNE1-210ENST00000416778 PMVKQ15126 192 aa10.78□□□□□ -0.68
CPNE1-210ENST00000416778 FA2HQ7L5A8 372 aa10.78□□□□□ -0.68
CPNE1-210ENST00000416778 CXCL5P42830 114 aa10.77□□□□□ -0.69
CPNE1-210ENST00000416778 RHEBQ15382 184 aa10.77□□□□□ -0.69
CPNE1-210ENST00000416778 COX7B2Q8TF08 81 aa10.77□□□□□ -0.69
CPNE1-210ENST00000416778 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
CPNE1-210ENST00000416778 LBHQ53QV2 105 aaPredicted RBP10.76□□□□□ -0.69
CPNE1-210ENST00000416778 URB1-AS1Q96HZ7 61 aa10.75□□□□□ -0.69
CPNE1-210ENST00000416778 SMCO4Q9NRQ5 59 aa10.75□□□□□ -0.69
CPNE1-210ENST00000416778 A0A096LNJ9 63 aa10.74□□□□□ -0.69
CPNE1-210ENST00000416778 SPINK8P0C7L1 97 aa10.74□□□□□ -0.69
CPNE1-210ENST00000416778 TP73-AS1Q9UF72 201 aa10.74□□□□□ -0.69
CPNE1-210ENST00000416778 ZNF861PO60384 105 aa10.73□□□□□ -0.69
CPNE1-210ENST00000416778 LINC00614P0C842 121 aa10.73□□□□□ -0.69
CPNE1-210ENST00000416778 TRAPPC1Q9Y5R8 145 aa10.73□□□□□ -0.69
CPNE1-210ENST00000416778 IGLV1-50A0A075B6I6 118 aa10.72□□□□□ -0.69
CPNE1-210ENST00000416778 NUPR1O60356 82 aa10.71□□□□□ -0.69
CPNE1-210ENST00000416778 RAB5BP61020 215 aa10.71□□□□□ -0.69
CPNE1-210ENST00000416778 MRPL55Q7Z7F7 128 aaKnown RBP10.71□□□□□ -0.69
CPNE1-210ENST00000416778 C18orf32Q8TCD1 76 aa10.71□□□□□ -0.69
CPNE1-210ENST00000416778 IGLC3P0DOY3 106 aa10.7□□□□□ -0.7
CPNE1-210ENST00000416778 LINC00167Q96N53 147 aa10.7□□□□□ -0.7
CPNE1-210ENST00000416778 RNF213Q63HN8 5207 aa10.7□□□□□ -0.7
CPNE1-210ENST00000416778 IGLV5-39A0A0G2JS06 123 aa10.69□□□□□ -0.7
CPNE1-210ENST00000416778 H3BRM9 83 aa10.69□□□□□ -0.7
CPNE1-210ENST00000416778 SLC7A5P1Q8MH63 180 aa10.69□□□□□ -0.7
CPNE1-210ENST00000416778 NDUFA6P56556 154 aa10.68□□□□□ -0.7
CPNE1-210ENST00000416778 APOC3P02656 99 aa10.67□□□□□ -0.7
CPNE1-210ENST00000416778 IGLV5-37A0A075B6J1 123 aa10.66□□□□□ -0.7
CPNE1-210ENST00000416778 RPL37AP8A6NKH3 93 aa10.66□□□□□ -0.7
CPNE1-210ENST00000416778 BCE1O60756 84 aa10.66□□□□□ -0.7
CPNE1-210ENST00000416778 ZNF22P17026 224 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-210ENST00000416778 PMCHL1Q16048 86 aa10.66□□□□□ -0.7
CPNE1-210ENST00000416778 NDUFA5Q16718 116 aa10.66□□□□□ -0.7
CPNE1-210ENST00000416778 ATP5LO75964 103 aa10.65□□□□□ -0.7
CPNE1-210ENST00000416778 HBDP02042 147 aa10.65□□□□□ -0.7
CPNE1-210ENST00000416778 LPAP08519 4548 aa10.65□□□□□ -0.71
CPNE1-210ENST00000416778 GAGE10A6NGK3 116 aa10.63□□□□□ -0.71
CPNE1-210ENST00000416778 SNAPINO95295 136 aa10.63□□□□□ -0.71
CPNE1-210ENST00000416778 RPL13AP40429 203 aaKnown RBP10.63□□□□□ -0.71
CPNE1-210ENST00000416778 BAGE3Q86Y29 109 aa10.63□□□□□ -0.71
CPNE1-210ENST00000416778 SVBPQ8N300 66 aa10.63□□□□□ -0.71
CPNE1-210ENST00000416778 PFN2P35080 140 aa10.62□□□□□ -0.71
CPNE1-210ENST00000416778 RPL28P46779 137 aaKnown RBP10.62□□□□□ -0.71
CPNE1-210ENST00000416778 YPEL4Q96NS1 127 aa10.62□□□□□ -0.71
CPNE1-210ENST00000416778 C11orf86A6NJI1 115 aa10.61□□□□□ -0.71
CPNE1-210ENST00000416778 SCO1O75880 301 aa10.59□□□□□ -0.71
CPNE1-210ENST00000416778 COX17Q14061 63 aa10.59□□□□□ -0.71
CPNE1-210ENST00000416778 KRTAP13-1Q8IUC0 172 aa10.59□□□□□ -0.71
CPNE1-210ENST00000416778 NKAPP1Q8N9T2 125 aa10.59□□□□□ -0.71
CPNE1-210ENST00000416778 SND1-IT1Q9HBX3 110 aa10.59□□□□□ -0.71
CPNE1-210ENST00000416778 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
CPNE1-210ENST00000416778 ZNF625Q96I27 306 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-210ENST00000416778 VPREB1P12018 145 aa10.57□□□□□ -0.72
CPNE1-210ENST00000416778 TMEM170BQ5T4T1 132 aa10.57□□□□□ -0.72
CPNE1-210ENST00000416778 A0A087X002 238 aa10.56□□□□□ -0.72
CPNE1-210ENST00000416778 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
CPNE1-210ENST00000416778 CHTOPQ9Y3Y2 248 aaKnown RBP10.56□□□□□ -0.72
CPNE1-210ENST00000416778 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
CPNE1-210ENST00000416778 TRAV12-1A0A0B4J245 112 aa10.54□□□□□ -0.72
CPNE1-210ENST00000416778 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
CPNE1-210ENST00000416778 Q8NDZ9 215 aa10.54□□□□□ -0.72
CPNE1-210ENST00000416778 ANAPC11Q9NYG5 84 aa10.54□□□□□ -0.72
CPNE1-210ENST00000416778 TMEM223A0PJW6 202 aa10.53□□□□□ -0.72
CPNE1-210ENST00000416778 CRYGAP11844 174 aa10.53□□□□□ -0.72
CPNE1-210ENST00000416778 RPL24P83731 157 aaKnown RBP10.53□□□□□ -0.72
CPNE1-210ENST00000416778 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
CPNE1-210ENST00000416778 IFI27L1Q96BM0 104 aa10.53□□□□□ -0.72
CPNE1-210ENST00000416778 UBE2AP49459 152 aa10.52□□□□□ -0.73
CPNE1-210ENST00000416778 TMEM238C9JI98 176 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms