RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TRAV9-1A0A075B6T8 112 aa9.19□□□□□ -0.94
UBXN4-203ENST00000416538 TRBV30A0A0K0K1B3 111 aa9.19□□□□□ -0.94
UBXN4-203ENST00000416538 K7EMI3 77 aa9.19□□□□□ -0.94
UBXN4-203ENST00000416538 S100PP25815 95 aa9.19□□□□□ -0.94
UBXN4-203ENST00000416538 COMMD7Q86VX2 200 aa9.19□□□□□ -0.94
UBXN4-203ENST00000416538 LINC01561Q8N1V8 128 aa9.19□□□□□ -0.94
UBXN4-203ENST00000416538 C2orf88Q9BSF0 95 aa9.19□□□□□ -0.94
UBXN4-203ENST00000416538 IGLV7-43P04211 117 aa9.18□□□□□ -0.94
UBXN4-203ENST00000416538 Q6ZN92 141 aa9.18□□□□□ -0.94
UBXN4-203ENST00000416538 NXT2Q9NPJ8 142 aaKnown RBP9.18□□□□□ -0.94
UBXN4-203ENST00000416538 NDUFC2-KCTD14E9PQ53 114 aa9.17□□□□□ -0.94
UBXN4-203ENST00000416538 M0QXV9 152 aa9.17□□□□□ -0.94
UBXN4-203ENST00000416538 NPSP0C0P6 89 aa9.17□□□□□ -0.94
UBXN4-203ENST00000416538 VCX2Q9H322 139 aa9.17□□□□□ -0.94
UBXN4-203ENST00000416538 CDKN2A-AS1Q9UH64 79 aa9.17□□□□□ -0.94
UBXN4-203ENST00000416538 G0S2P27469 103 aa9.16□□□□□ -0.94
UBXN4-203ENST00000416538 TOMM6Q96B49 74 aa9.16□□□□□ -0.94
UBXN4-203ENST00000416538 TIMM17AQ99595 171 aa9.16□□□□□ -0.94
UBXN4-203ENST00000416538 TOMM7Q9P0U1 55 aa9.16□□□□□ -0.94
UBXN4-203ENST00000416538 Q8IZM0 81 aa9.14□□□□□ -0.95
UBXN4-203ENST00000416538 LINC00469Q8N7U9 141 aa9.14□□□□□ -0.95
UBXN4-203ENST00000416538 PACRGQ96M98 296 aaPredicted RBP9.14□□□□□ -0.95
UBXN4-203ENST00000416538 GNB1LQ9BYB4 327 aa9.14□□□□□ -0.95
UBXN4-203ENST00000416538 KRTAP1-4P0C5Y4 121 aa9.13□□□□□ -0.95
UBXN4-203ENST00000416538 COX19Q49B96 90 aa9.13□□□□□ -0.95
UBXN4-203ENST00000416538 PAPPA-AS1Q5QFB9 102 aa9.13□□□□□ -0.95
UBXN4-203ENST00000416538 ALKBH7Q9BT30 221 aaPredicted RBP9.13□□□□□ -0.95
UBXN4-203ENST00000416538 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
UBXN4-203ENST00000416538 SMIM1B2RUZ4 78 aa9.12□□□□□ -0.95
UBXN4-203ENST00000416538 H0Y9J4 135 aa9.12□□□□□ -0.95
UBXN4-203ENST00000416538 HERVK_113P63121 156 aa9.12□□□□□ -0.95
UBXN4-203ENST00000416538 RHEBQ15382 184 aa9.12□□□□□ -0.95
UBXN4-203ENST00000416538 C10orf91Q5T1B1 145 aa9.12□□□□□ -0.95
UBXN4-203ENST00000416538 PRR26Q8N8Z3 221 aa9.12□□□□□ -0.95
UBXN4-203ENST00000416538 XAGE1AQ9HD64 81 aa9.12□□□□□ -0.95
UBXN4-203ENST00000416538 RPS10P5Q9NQ39 176 aa9.12□□□□□ -0.95
UBXN4-203ENST00000416538 PRSS2P07478 247 aa9.11□□□□□ -0.95
UBXN4-203ENST00000416538 ERASQ7Z444 233 aa9.11□□□□□ -0.95
UBXN4-203ENST00000416538 CARHSP1Q9Y2V2 147 aaKnown RBP9.11□□□□□ -0.95
UBXN4-203ENST00000416538 IGLV5-45A0A087WSX0 123 aa9.1□□□□□ -0.95
UBXN4-203ENST00000416538 UBE2BP63146 152 aa9.1□□□□□ -0.95
UBXN4-203ENST00000416538 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
UBXN4-203ENST00000416538 SCGB3A1Q96QR1 104 aa9.1□□□□□ -0.95
UBXN4-203ENST00000416538 GEMIN7Q9H840 131 aaKnown RBP9.1□□□□□ -0.95
UBXN4-203ENST00000416538 CKS1BP61024 79 aa9.09□□□□□ -0.95
UBXN4-203ENST00000416538 SEC11AP67812 179 aa9.09□□□□□ -0.95
UBXN4-203ENST00000416538 FABP9Q0Z7S8 132 aa9.09□□□□□ -0.95
UBXN4-203ENST00000416538 C6orf226Q5I0X4 101 aa9.09□□□□□ -0.95
UBXN4-203ENST00000416538 KRTAP19-1Q8IUB9 90 aa9.09□□□□□ -0.95
UBXN4-203ENST00000416538 A0A096LNJ9 63 aa9.08□□□□□ -0.96
UBXN4-203ENST00000416538 LINC01549A6NIU2 74 aa9.08□□□□□ -0.96
UBXN4-203ENST00000416538 F8VRH5 84 aa9.08□□□□□ -0.96
UBXN4-203ENST00000416538 TINCRA0A1B0GVN0 87 aa9.07□□□□□ -0.96
UBXN4-203ENST00000416538 URB1-AS1Q96HZ7 61 aa9.07□□□□□ -0.96
UBXN4-203ENST00000416538 C22orf24Q9Y442 160 aa9.07□□□□□ -0.96
UBXN4-203ENST00000416538 LPAP08519 4548 aa9.06□□□□□ -0.96
UBXN4-203ENST00000416538 SPINK8P0C7L1 97 aa9.06□□□□□ -0.96
UBXN4-203ENST00000416538 FA2HQ7L5A8 372 aa9.06□□□□□ -0.96
UBXN4-203ENST00000416538 CST9LQ9H4G1 147 aa9.06□□□□□ -0.96
UBXN4-203ENST00000416538 COX7B2Q8TF08 81 aa9.05□□□□□ -0.96
UBXN4-203ENST00000416538 SMCO4Q9NRQ5 59 aa9.05□□□□□ -0.96
UBXN4-203ENST00000416538 APOC3P02656 99 aa9.04□□□□□ -0.96
UBXN4-203ENST00000416538 CXCL5P42830 114 aa9.04□□□□□ -0.96
UBXN4-203ENST00000416538 NDUFA5Q16718 116 aa9.04□□□□□ -0.96
UBXN4-203ENST00000416538 PDZD11Q5EBL8 140 aa9.04□□□□□ -0.96
UBXN4-203ENST00000416538 PMVKQ15126 192 aa9.03□□□□□ -0.96
UBXN4-203ENST00000416538 TRAPPC1Q9Y5R8 145 aa9.03□□□□□ -0.96
UBXN4-203ENST00000416538 RNF213Q63HN8 5207 aa9.02□□□□□ -0.96
UBXN4-203ENST00000416538 SNAPINO95295 136 aa9.02□□□□□ -0.97
UBXN4-203ENST00000416538 SVBPQ8N300 66 aa9.02□□□□□ -0.97
UBXN4-203ENST00000416538 C18orf32Q8TCD1 76 aa9.02□□□□□ -0.97
UBXN4-203ENST00000416538 MRPL55Q7Z7F7 128 aaKnown RBP9.01□□□□□ -0.97
UBXN4-203ENST00000416538 TP73-AS1Q9UF72 201 aa9.01□□□□□ -0.97
UBXN4-203ENST00000416538 IGLV1-50A0A075B6I6 118 aa9□□□□□ -0.97
UBXN4-203ENST00000416538 ZNF861PO60384 105 aa9□□□□□ -0.97
UBXN4-203ENST00000416538 IGLC3P0DOY3 106 aa9□□□□□ -0.97
UBXN4-203ENST00000416538 PMCHL1Q16048 86 aa9□□□□□ -0.97
UBXN4-203ENST00000416538 KRTAP9-9Q9BYP9 154 aa9□□□□□ -0.97
UBXN4-203ENST00000416538 KRTAP9-4Q9BYQ2 154 aa9□□□□□ -0.97
UBXN4-203ENST00000416538 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
UBXN4-203ENST00000416538 ZNF22P17026 224 aaPredicted RBP8.99□□□□□ -0.97
UBXN4-203ENST00000416538 LINC00167Q96N53 147 aa8.99□□□□□ -0.97
UBXN4-203ENST00000416538 RPL37AP8A6NKH3 93 aa8.98□□□□□ -0.97
UBXN4-203ENST00000416538 NUPR1O60356 82 aa8.98□□□□□ -0.97
UBXN4-203ENST00000416538 SCO1O75880 301 aa8.98□□□□□ -0.97
UBXN4-203ENST00000416538 LINC00614P0C842 121 aa8.98□□□□□ -0.97
UBXN4-203ENST00000416538 RAB5BP61020 215 aa8.98□□□□□ -0.97
UBXN4-203ENST00000416538 IGLV5-37A0A075B6J1 123 aa8.97□□□□□ -0.97
UBXN4-203ENST00000416538 GAGE10A6NGK3 116 aa8.97□□□□□ -0.97
UBXN4-203ENST00000416538 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
UBXN4-203ENST00000416538 A0A087X002 238 aa8.96□□□□□ -0.98
UBXN4-203ENST00000416538 BCE1O60756 84 aa8.96□□□□□ -0.98
UBXN4-203ENST00000416538 C11orf86A6NJI1 115 aa8.95□□□□□ -0.98
UBXN4-203ENST00000416538 H3BRM9 83 aa8.95□□□□□ -0.98
UBXN4-203ENST00000416538 HBDP02042 147 aa8.95□□□□□ -0.98
UBXN4-203ENST00000416538 NDUFA6P56556 154 aa8.95□□□□□ -0.98
UBXN4-203ENST00000416538 KRTAP13-1Q8IUC0 172 aa8.95□□□□□ -0.98
UBXN4-203ENST00000416538 Q8NDZ9 215 aa8.95□□□□□ -0.98
UBXN4-203ENST00000416538 YPEL4Q96NS1 127 aa8.94□□□□□ -0.98
UBXN4-203ENST00000416538 ATP5LO75964 103 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms