RNA–Protein interactions for RNA: ENST00000416526.5

HMG20B-203, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-203ENST00000416526 URB1-AS1Q96HZ7 61 aa13.54□□□□□ -0.24
HMG20B-203ENST00000416526 TRAPPC1Q9Y5R8 145 aa13.54□□□□□ -0.24
HMG20B-203ENST00000416526 LINC01549A6NIU2 74 aa13.53□□□□□ -0.24
HMG20B-203ENST00000416526 Q8IZM0 81 aa13.53□□□□□ -0.24
HMG20B-203ENST00000416526 SMCO4Q9NRQ5 59 aa13.53□□□□□ -0.24
HMG20B-203ENST00000416526 PRSS2P07478 247 aa13.52□□□□□ -0.25
HMG20B-203ENST00000416526 SRSF9Q13242 221 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMG20B-203ENST00000416526 KRTAP7-1Q8IUC3 87 aa13.52□□□□□ -0.25
HMG20B-203ENST00000416526 C18orf32Q8TCD1 76 aa13.52□□□□□ -0.25
HMG20B-203ENST00000416526 PACRGQ96M98 296 aaPredicted RBP13.52□□□□□ -0.25
HMG20B-203ENST00000416526 CST9LQ9H4G1 147 aa13.52□□□□□ -0.25
HMG20B-203ENST00000416526 A0A096LNJ9 63 aa13.51□□□□□ -0.25
HMG20B-203ENST00000416526 TINCRA0A1B0GVN0 87 aa13.51□□□□□ -0.25
HMG20B-203ENST00000416526 NDUFC2-KCTD14E9PQ53 114 aa13.51□□□□□ -0.25
HMG20B-203ENST00000416526 ATP6V1G1O75348 118 aa13.51□□□□□ -0.25
HMG20B-203ENST00000416526 C6orf226Q5I0X4 101 aa13.51□□□□□ -0.25
HMG20B-203ENST00000416526 PSORS1C2Q9UIG4 136 aa13.51□□□□□ -0.25
HMG20B-203ENST00000416526 IGLV5-45A0A087WSX0 123 aa13.5□□□□□ -0.25
HMG20B-203ENST00000416526 CKS1BP61024 79 aa13.5□□□□□ -0.25
HMG20B-203ENST00000416526 SPINK6Q6UWN8 80 aa13.5□□□□□ -0.25
HMG20B-203ENST00000416526 LINC00469Q8N7U9 141 aa13.5□□□□□ -0.25
HMG20B-203ENST00000416526 C9orf129Q5T035 196 aaKnown RBP13.49□□□□□ -0.25
HMG20B-203ENST00000416526 FAM19A5Q7Z5A7 132 aaPredicted RBP13.49□□□□□ -0.25
HMG20B-203ENST00000416526 YPEL4Q96NS1 127 aa13.49□□□□□ -0.25
HMG20B-203ENST00000416526 SMIM1B2RUZ4 78 aa13.48□□□□□ -0.25
HMG20B-203ENST00000416526 PMVKQ15126 192 aa13.48□□□□□ -0.25
HMG20B-203ENST00000416526 SERTAD4-AS1Q5TG53 156 aa13.48□□□□□ -0.25
HMG20B-203ENST00000416526 KRTAP11-1Q8IUC1 163 aa13.48□□□□□ -0.25
HMG20B-203ENST00000416526 LINC00614P0C842 121 aa13.46□□□□□ -0.25
HMG20B-203ENST00000416526 PMCHL1Q16048 86 aa13.45□□□□□ -0.26
HMG20B-203ENST00000416526 PDZD11Q5EBL8 140 aa13.45□□□□□ -0.26
HMG20B-203ENST00000416526 LINC01600Q96MT4 127 aa13.45□□□□□ -0.26
HMG20B-203ENST00000416526 F8VRH5 84 aa13.44□□□□□ -0.26
HMG20B-203ENST00000416526 C1orf137Q5JT78 98 aa13.44□□□□□ -0.26
HMG20B-203ENST00000416526 SPINK8P0C7L1 97 aa13.43□□□□□ -0.26
HMG20B-203ENST00000416526 COX7B2Q8TF08 81 aa13.43□□□□□ -0.26
HMG20B-203ENST00000416526 HBDP02042 147 aa13.42□□□□□ -0.26
HMG20B-203ENST00000416526 CXCL5P42830 114 aa13.42□□□□□ -0.26
HMG20B-203ENST00000416526 M0QXV9 152 aa13.41□□□□□ -0.26
HMG20B-203ENST00000416526 IGLC3P0DOY3 106 aa13.4□□□□□ -0.26
HMG20B-203ENST00000416526 REG3GQ6UW15 175 aa13.4□□□□□ -0.26
HMG20B-203ENST00000416526 XAGE1AQ9HD64 81 aa13.4□□□□□ -0.26
HMG20B-203ENST00000416526 NDUFA6P56556 154 aa13.39□□□□□ -0.27
HMG20B-203ENST00000416526 RAB5BP61020 215 aa13.38□□□□□ -0.27
HMG20B-203ENST00000416526 CBLN2Q8IUK8 224 aa13.38□□□□□ -0.27
HMG20B-203ENST00000416526 IGLV7-43P04211 117 aa13.37□□□□□ -0.27
HMG20B-203ENST00000416526 H3BRM9 83 aa13.36□□□□□ -0.27
HMG20B-203ENST00000416526 KRTAP10-8P60410 259 aa13.36□□□□□ -0.27
HMG20B-203ENST00000416526 IGLV5-39A0A0G2JS06 123 aa13.35□□□□□ -0.27
HMG20B-203ENST00000416526 ZNF22P17026 224 aaPredicted RBP13.35□□□□□ -0.27
HMG20B-203ENST00000416526 UBE2BP63146 152 aa13.35□□□□□ -0.27
HMG20B-203ENST00000416526 PLA2G2DQ9UNK4 145 aa13.35□□□□□ -0.27
HMG20B-203ENST00000416526 ATP5LO75964 103 aa13.34□□□□□ -0.27
HMG20B-203ENST00000416526 ODF1Q14990 250 aa13.34□□□□□ -0.27
HMG20B-203ENST00000416526 C22orf24Q9Y442 160 aa13.34□□□□□ -0.27
HMG20B-203ENST00000416526 BAGE3Q86Y29 109 aa13.32□□□□□ -0.28
HMG20B-203ENST00000416526 C11orf86A6NJI1 115 aa13.31□□□□□ -0.28
HMG20B-203ENST00000416526 CHCHD1Q96BP2 118 aaKnown RBP13.31□□□□□ -0.28
HMG20B-203ENST00000416526 SCO1O75880 301 aa13.28□□□□□ -0.28
HMG20B-203ENST00000416526 DIRC1Q969H9 104 aa13.28□□□□□ -0.28
HMG20B-203ENST00000416526 COLCA2A8K830 154 aa13.27□□□□□ -0.29
HMG20B-203ENST00000416526 TP73-AS1Q9UF72 201 aa13.27□□□□□ -0.29
HMG20B-203ENST00000416526 UBR4Q5T4S7 5183 aa13.26□□□□□ -0.29
HMG20B-203ENST00000416526 H0Y9J4 135 aa13.26□□□□□ -0.29
HMG20B-203ENST00000416526 TRGC2P03986 189 aa13.26□□□□□ -0.29
HMG20B-203ENST00000416526 LBHQ53QV2 105 aaPredicted RBP13.26□□□□□ -0.29
HMG20B-203ENST00000416526 CHTOPQ9Y3Y2 248 aaKnown RBP13.26□□□□□ -0.29
HMG20B-203ENST00000416526 TMEM170BQ5T4T1 132 aa13.25□□□□□ -0.29
HMG20B-203ENST00000416526 MRPL55Q7Z7F7 128 aaKnown RBP13.25□□□□□ -0.29
HMG20B-203ENST00000416526 IFI27L1Q96BM0 104 aa13.25□□□□□ -0.29
HMG20B-203ENST00000416526 FAM19A2Q8N3H0 131 aa13.24□□□□□ -0.29
HMG20B-203ENST00000416526 TRAV12-1A0A0B4J245 112 aa13.23□□□□□ -0.29
HMG20B-203ENST00000416526 PFN2P35080 140 aa13.23□□□□□ -0.29
HMG20B-203ENST00000416526 LINC00167Q96N53 147 aa13.22□□□□□ -0.29
HMG20B-203ENST00000416526 IGLV5-37A0A075B6J1 123 aa13.21□□□□□ -0.29
HMG20B-203ENST00000416526 HSBP1O75506 76 aa13.21□□□□□ -0.29
HMG20B-203ENST00000416526 LINC00310P59036 64 aa13.21□□□□□ -0.29
HMG20B-203ENST00000416526 ERG28Q9UKR5 140 aa13.21□□□□□ -0.29
HMG20B-203ENST00000416526 NUPR1O60356 82 aa13.2□□□□□ -0.3
HMG20B-203ENST00000416526 KRTAP1-4P0C5Y4 121 aa13.2□□□□□ -0.3
HMG20B-203ENST00000416526 ZNF625Q96I27 306 aaPredicted RBP13.2□□□□□ -0.3
HMG20B-203ENST00000416526 TMEM223A0PJW6 202 aa13.19□□□□□ -0.3
HMG20B-203ENST00000416526 GAGE10A6NGK3 116 aa13.19□□□□□ -0.3
HMG20B-203ENST00000416526 ZNF861PO60384 105 aa13.19□□□□□ -0.3
HMG20B-203ENST00000416526 PRR26Q8N8Z3 221 aa13.19□□□□□ -0.3
HMG20B-203ENST00000416526 RPL37AP8A6NKH3 93 aa13.18□□□□□ -0.3
HMG20B-203ENST00000416526 SND1-IT1Q9HBX3 110 aa13.18□□□□□ -0.3
HMG20B-203ENST00000416526 SERF1AO75920 110 aa13.17□□□□□ -0.3
HMG20B-203ENST00000416526 COX17Q14061 63 aa13.16□□□□□ -0.3
HMG20B-203ENST00000416526 NKAPP1Q8N9T2 125 aa13.15□□□□□ -0.3
HMG20B-203ENST00000416526 LRP2P98164 4655 aa13.15□□□□□ -0.31
HMG20B-203ENST00000416526 BCE1O60756 84 aa13.14□□□□□ -0.31
HMG20B-203ENST00000416526 SFTA2Q6UW10 78 aa13.14□□□□□ -0.31
HMG20B-203ENST00000416526 VPREB1P12018 145 aa13.13□□□□□ -0.31
HMG20B-203ENST00000416526 Q8NDZ9 215 aa13.13□□□□□ -0.31
HMG20B-203ENST00000416526 IGLV1-50A0A075B6I6 118 aa13.11□□□□□ -0.31
HMG20B-203ENST00000416526 H0Y8G0 127 aa13.11□□□□□ -0.31
HMG20B-203ENST00000416526 LEPROTL1O95214 131 aa13.11□□□□□ -0.31
HMG20B-203ENST00000416526 IGKV2-28A0A075B6P5 120 aa13.09□□□□□ -0.31
HMG20B-203ENST00000416526 IGKV2D-28P01615 120 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms