RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
COL12A1-203ENST00000416123 C10orf25Q5T742 122 aa7.6□□□□□ -1.19
COL12A1-203ENST00000416123 PRR4Q16378 134 aa7.6□□□□□ -1.19
COL12A1-203ENST00000416123 NDUFV3P56181 108 aaKnown RBP7.6□□□□□ -1.19
COL12A1-203ENST00000416123 ZNF580Q9UK33 172 aa7.59□□□□□ -1.19
COL12A1-203ENST00000416123 REG3GQ6UW15 175 aa7.59□□□□□ -1.19
COL12A1-203ENST00000416123 LINC01556Q5JQF7 62 aa7.59□□□□□ -1.19
COL12A1-203ENST00000416123 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.19
COL12A1-203ENST00000416123 CNFNQ9BYD5 112 aa7.59□□□□□ -1.19
COL12A1-203ENST00000416123 SETD2Q9BYW2 2564 aaPredicted RBP7.58□□□□□ -1.2
COL12A1-203ENST00000416123 BRCA2P51587 3418 aa7.58□□□□□ -1.2
COL12A1-203ENST00000416123 J3KT08 172 aa7.58□□□□□ -1.2
COL12A1-203ENST00000416123 XIRP2A4UGR9 3374 aa7.58□□□□□ -1.2
COL12A1-203ENST00000416123 PRRC2CQ9Y520 2896 aaKnown RBP7.57□□□□□ -1.2
COL12A1-203ENST00000416123 TRBV10-3A0A0K0K1G6 114 aa7.57□□□□□ -1.2
COL12A1-203ENST00000416123 SMIM1B2RUZ4 78 aa7.56□□□□□ -1.2
COL12A1-203ENST00000416123 C1orf137Q5JT78 98 aa7.56□□□□□ -1.2
COL12A1-203ENST00000416123 LYPD5Q6UWN5 251 aa7.56□□□□□ -1.2
COL12A1-203ENST00000416123 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
COL12A1-203ENST00000416123 LST1O00453 97 aa7.56□□□□□ -1.2
COL12A1-203ENST00000416123 TSPEAR-AS2P59090 65 aa7.55□□□□□ -1.2
COL12A1-203ENST00000416123 CHD8Q9HCK8 2581 aa7.55□□□□□ -1.2
COL12A1-203ENST00000416123 C1orf134Q5TEV5 83 aa7.55□□□□□ -1.2
COL12A1-203ENST00000416123 A0A087WYN8 130 aa7.55□□□□□ -1.2
COL12A1-203ENST00000416123 URB1-AS1Q96HZ7 61 aa7.55□□□□□ -1.2
COL12A1-203ENST00000416123 A8MTW9 85 aa7.54□□□□□ -1.2
COL12A1-203ENST00000416123 RPL28P46779 137 aaKnown RBP7.54□□□□□ -1.2
COL12A1-203ENST00000416123 ADAMTSL4-AS1Q5T5F5 129 aa7.53□□□□□ -1.2
COL12A1-203ENST00000416123 FHL3Q13643 280 aa7.53□□□□□ -1.2
COL12A1-203ENST00000416123 USP9XQ93008 2570 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-203ENST00000416123 V9GYY9 64 aa7.53□□□□□ -1.2
COL12A1-203ENST00000416123 DEFB116Q30KQ4 102 aa7.53□□□□□ -1.2
COL12A1-203ENST00000416123 Q8N814 137 aa7.52□□□□□ -1.21
COL12A1-203ENST00000416123 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.52□□□□□ -1.21
COL12A1-203ENST00000416123 EGFEM1PQ0D2K5 195 aa7.52□□□□□ -1.21
COL12A1-203ENST00000416123 ESRGQ1W209 222 aa7.52□□□□□ -1.21
COL12A1-203ENST00000416123 FAM236DA0A1B0GTK5 79 aa7.51□□□□□ -1.21
COL12A1-203ENST00000416123 FAM236CP0DP71 79 aa7.51□□□□□ -1.21
COL12A1-203ENST00000416123 ATP5EP2Q5VTU8 51 aa7.51□□□□□ -1.21
COL12A1-203ENST00000416123 LINC00310P59036 64 aa7.51□□□□□ -1.21
COL12A1-203ENST00000416123 UQCRQO14949 82 aa7.51□□□□□ -1.21
COL12A1-203ENST00000416123 NDUFC2-KCTD14E9PQ53 114 aa7.5□□□□□ -1.21
COL12A1-203ENST00000416123 IGHV6-1A0A0B4J1U7 121 aa7.5□□□□□ -1.21
COL12A1-203ENST00000416123 SERP2Q8N6R1 65 aa7.49□□□□□ -1.21
COL12A1-203ENST00000416123 PRLHP81277 87 aa7.49□□□□□ -1.21
COL12A1-203ENST00000416123 Q9BRP9 147 aa7.49□□□□□ -1.21
COL12A1-203ENST00000416123 Q6ZRU5 148 aa7.49□□□□□ -1.21
COL12A1-203ENST00000416123 BEAN1Q3B7T3 259 aa7.49□□□□□ -1.21
COL12A1-203ENST00000416123 FAM19A3Q7Z5A8 133 aa7.48□□□□□ -1.21
COL12A1-203ENST00000416123 AMELXQ99217 191 aa7.48□□□□□ -1.21
COL12A1-203ENST00000416123 Q6ZVQ6 151 aa7.48□□□□□ -1.21
COL12A1-203ENST00000416123 CEP295Q9C0D2 2601 aa7.48□□□□□ -1.21
COL12A1-203ENST00000416123 NTM-AS1Q6ZSK4 140 aa7.47□□□□□ -1.21
COL12A1-203ENST00000416123 X6R8D5 127 aa7.47□□□□□ -1.21
COL12A1-203ENST00000416123 MDFIQ99750 246 aa7.47□□□□□ -1.21
COL12A1-203ENST00000416123 BPTFQ12830 3046 aa7.47□□□□□ -1.21
COL12A1-203ENST00000416123 SBSPONQ8IVN8 264 aa7.46□□□□□ -1.22
COL12A1-203ENST00000416123 LAMA2P24043 3122 aaKnown RBP7.46□□□□□ -1.22
COL12A1-203ENST00000416123 CSDC2Q9Y534 153 aaKnown RBP7.46□□□□□ -1.22
COL12A1-203ENST00000416123 A0A1B0GUV1 79 aa7.45□□□□□ -1.22
COL12A1-203ENST00000416123 A6NED7 52 aa7.45□□□□□ -1.22
COL12A1-203ENST00000416123 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
COL12A1-203ENST00000416123 ZNF462Q96JM2 2506 aa7.45□□□□□ -1.22
COL12A1-203ENST00000416123 A0A0U1RQV1 116 aa7.45□□□□□ -1.22
COL12A1-203ENST00000416123 NHLRC4P0CG21 123 aaPredicted RBP7.45□□□□□ -1.22
COL12A1-203ENST00000416123 LAMA3Q16787 3333 aa7.44□□□□□ -1.22
COL12A1-203ENST00000416123 ACANP16112 2415 aa7.44□□□□□ -1.22
COL12A1-203ENST00000416123 Q8N9L7 120 aa7.44□□□□□ -1.22
COL12A1-203ENST00000416123 Q8N2B8 174 aa7.44□□□□□ -1.22
COL12A1-203ENST00000416123 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
COL12A1-203ENST00000416123 LINC00575Q6W349 94 aa7.43□□□□□ -1.22
COL12A1-203ENST00000416123 MUC7Q8TAX7 377 aa7.43□□□□□ -1.22
COL12A1-203ENST00000416123 USP9YO00507 2555 aaPredicted RBP7.43□□□□□ -1.22
COL12A1-203ENST00000416123 LINC01547P58512 204 aaPredicted RBP7.43□□□□□ -1.22
COL12A1-203ENST00000416123 C11orf72Q8NBR9 251 aa7.43□□□□□ -1.22
COL12A1-203ENST00000416123 A0A096LNJ9 63 aa7.43□□□□□ -1.22
COL12A1-203ENST00000416123 KRTAP24-1Q3LI83 254 aa7.43□□□□□ -1.22
COL12A1-203ENST00000416123 CCDC179H3BU77 68 aa7.43□□□□□ -1.22
COL12A1-203ENST00000416123 Q8N3U1 123 aa7.43□□□□□ -1.22
COL12A1-203ENST00000416123 FAM240AA0A1B0GVK7 77 aa7.42□□□□□ -1.22
COL12A1-203ENST00000416123 COX8CQ7Z4L0 72 aa7.42□□□□□ -1.22
COL12A1-203ENST00000416123 XGP55808 180 aa7.42□□□□□ -1.22
COL12A1-203ENST00000416123 PRUNE2Q8WUY3 3088 aa7.41□□□□□ -1.22
COL12A1-203ENST00000416123 POLQO75417 2590 aa7.41□□□□□ -1.22
COL12A1-203ENST00000416123 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
COL12A1-203ENST00000416123 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
COL12A1-203ENST00000416123 FSHBP01225 129 aa7.41□□□□□ -1.22
COL12A1-203ENST00000416123 CHD7Q9P2D1 2997 aa7.41□□□□□ -1.22
COL12A1-203ENST00000416123 A0A087WSZ3 146 aa7.4□□□□□ -1.22
COL12A1-203ENST00000416123 A0A087WVE0 104 aa7.4□□□□□ -1.22
COL12A1-203ENST00000416123 LINC00208Q96KT6 92 aa7.4□□□□□ -1.22
COL12A1-203ENST00000416123 PKD1L2Q7Z442 2459 aa7.4□□□□□ -1.23
COL12A1-203ENST00000416123 CHTF8P0CG12 524 aa7.4□□□□□ -1.23
COL12A1-203ENST00000416123 Q9UF83 564 aa7.4□□□□□ -1.23
COL12A1-203ENST00000416123 PCOTHQ58A44 107 aa7.39□□□□□ -1.23
COL12A1-203ENST00000416123 MTORP42345 2549 aa7.39□□□□□ -1.23
COL12A1-203ENST00000416123 CFAP54Q96N23 3096 aa7.38□□□□□ -1.23
COL12A1-203ENST00000416123 CDH23Q9H251 3354 aa7.38□□□□□ -1.23
COL12A1-203ENST00000416123 SPINK1P00995 79 aa7.38□□□□□ -1.23
COL12A1-203ENST00000416123 NDUFC1O43677 76 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms