RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 CCL22O00626 93 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 IFNA17P01571 189 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 BTG2P78543 158 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 SMCO1Q147U7 214 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPAG11AQ6PDA7 123 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 LZICQ8WZA0 190 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 LYSTQ99698 3801 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 LINC00470Q9BZP3 86 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 NDUFA4L2Q9NRX3 87 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 KIF21AQ7Z4S6 1674 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 DNAH1Q9P2D7 4330 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 SRCAPQ6ZRS2 3230 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 NUP188Q5SRE5 1749 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 FMN2Q9NZ56 1722 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 MGAQ8IWI9 3026 aa-0.22□□□□□ -2.45
TRAPPC13-203ENST00000415825 TROQ12816 1431 aaPredicted RBP-0.22□□□□□ -2.45
TRAPPC13-203ENST00000415825 MAGI1Q96QZ7 1491 aaPredicted RBP-0.22□□□□□ -2.45
TRAPPC13-203ENST00000415825 ARHGEF12Q9NZN5 1544 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 ANK3Q12955 4377 aaKnown RBP-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 RIMS1Q86UR5 1692 aaKnown RBP-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 PREX1Q8TCU6 1659 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 QSER1Q2KHR3 1735 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 RGPD3A6NKT7 1758 aaPredicted RBP-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 RGPD4Q7Z3J3 1758 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 TRBV7-4A0A0J9YYF1 115 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 SYS1-DBNDD2H3BUS1 97 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 SPRR1BP22528 89 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 TPPP2P59282 170 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 ARPC4P59998 168 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 MT1XP80297 61 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 WHAMMP3Q1A5X7 153 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 MEIG1Q5JSS6 88 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 Q6AWC8 147 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 COX6B2Q6YFQ2 88 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 TTC9CQ8N5M4 171 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 PDCD10Q9BUL8 212 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 SNRNP25Q9BV90 132 aaKnown RBP-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 SPANXDQ9BXN6 97 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 NPVFQ9HCQ7 196 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 LENEPQ9Y5L5 61 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 SERP1Q9Y6X1 66 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 R4GMQ9 66 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 TRRAPQ9Y4A5 3859 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 PSME4Q14997 1843 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 ARFGEF1Q9Y6D6 1849 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 ABCC5O15440 1437 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 CLIP1P30622 1438 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 NKTRP30414 1462 aaKnown RBP-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 GRIN2AQ12879 1464 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 MBD5Q9P267 1494 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 MUC17Q685J3 4493 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 PLXNC1O60486 1568 aa-0.23□□□□□ -2.45
TRAPPC13-203ENST00000415825 CUL7Q14999 1698 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 SHPRHQ149N8 1683 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 CDC42BPAQ5VT25 1732 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 BIRC6Q9NR09 4857 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 MYH13Q9UKX3 1938 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 TRBV7-3A0A075B6L6 115 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 CTXND1A0A1B0GTU2 59 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 IGLC7A0M8Q6 106 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 OOSP1A8MZH6 123 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 H7BZZ5 65 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 K7EP13 123 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 UQCR11O14957 56 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 APOC3P02656 99 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 MT1EP04732 61 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 DEFB1P60022 68 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 SELENOWP63302 87 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 KRTAP20-1Q3LI63 56 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 DEFB105AQ8NG35 78 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 TCEAL4Q96EI5 215 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 PFDN5Q99471 154 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 RERGLQ9H628 205 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 NAA60Q9H7X0 242 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 CCDC167Q9P0B6 97 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 LINC01558Q9Y6Z2 57 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 V9GYH0 126 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 FRYLO94915 3013 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 PPIP5K1Q6PFW1 1433 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 NCOA3Q9Y6Q9 1424 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 POLA1P09884 1462 aaPredicted RBP-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 FYCO1Q9BQS8 1478 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 CSMD2Q7Z408 3487 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 MAGI3Q5TCQ9 1506 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 ABCC2Q92887 1545 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 DEPDC5O75140 1603 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 SHROOM2Q13796 1616 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 ZNF236Q9UL36 1845 aa-0.24□□□□□ -2.45
TRAPPC13-203ENST00000415825 CFAP54Q96N23 3096 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 SPENQ96T58 3664 aaKnown RBP-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 ZFHX3Q15911 3703 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 LOC285095A0A1B0GVY8 99 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 F8VRH5 84 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 H0YAA0 97 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 HMGN4O00479 90 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 MT1BP07438 61 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 MGPP08493 103 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 SAA2P0DJI9 122 aaPredicted RBP-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 CATR1Q13166 79 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms