RNA–Protein interactions for RNA: ENST00000414040.6

TNFRSF25-206, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,198 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-206ENST00000414040 SCGB3A1Q96QR1 104 aa13.81□□□□□ -0.2
TNFRSF25-206ENST00000414040 GNB1LQ9BYB4 327 aa13.81□□□□□ -0.2
TNFRSF25-206ENST00000414040 LRP2P98164 4655 aa13.81□□□□□ -0.2
TNFRSF25-206ENST00000414040 CKS1BP61024 79 aa13.8□□□□□ -0.2
TNFRSF25-206ENST00000414040 C6orf226Q5I0X4 101 aa13.8□□□□□ -0.2
TNFRSF25-206ENST00000414040 GEMIN7Q9H840 131 aaKnown RBP13.8□□□□□ -0.2
TNFRSF25-206ENST00000414040 LINC01546A6NGU7 62 aa13.79□□□□□ -0.2
TNFRSF25-206ENST00000414040 S100PP25815 95 aa13.79□□□□□ -0.2
TNFRSF25-206ENST00000414040 PAPPA-AS1Q5QFB9 102 aa13.79□□□□□ -0.2
TNFRSF25-206ENST00000414040 G0S2P27469 103 aa13.78□□□□□ -0.2
TNFRSF25-206ENST00000414040 UBE2BP63146 152 aa13.78□□□□□ -0.2
TNFRSF25-206ENST00000414040 XAGE1AQ9HD64 81 aa13.78□□□□□ -0.2
TNFRSF25-206ENST00000414040 SMIM1B2RUZ4 78 aa13.77□□□□□ -0.21
TNFRSF25-206ENST00000414040 SEC11AP67812 179 aa13.77□□□□□ -0.21
TNFRSF25-206ENST00000414040 C10orf91Q5T1B1 145 aa13.77□□□□□ -0.21
TNFRSF25-206ENST00000414040 MRPL18Q9H0U6 180 aaKnown RBP13.77□□□□□ -0.21
TNFRSF25-206ENST00000414040 H0Y9J4 135 aa13.75□□□□□ -0.21
TNFRSF25-206ENST00000414040 PRR26Q8N8Z3 221 aa13.75□□□□□ -0.21
TNFRSF25-206ENST00000414040 DIRC1Q969H9 104 aa13.75□□□□□ -0.21
TNFRSF25-206ENST00000414040 F8VRH5 84 aa13.74□□□□□ -0.21
TNFRSF25-206ENST00000414040 FABP9Q0Z7S8 132 aa13.74□□□□□ -0.21
TNFRSF25-206ENST00000414040 RPS10P5Q9NQ39 176 aa13.74□□□□□ -0.21
TNFRSF25-206ENST00000414040 CARHSP1Q9Y2V2 147 aaKnown RBP13.74□□□□□ -0.21
TNFRSF25-206ENST00000414040 IGLV5-45A0A087WSX0 123 aa13.73□□□□□ -0.21
TNFRSF25-206ENST00000414040 TINCRA0A1B0GVN0 87 aa13.73□□□□□ -0.21
TNFRSF25-206ENST00000414040 CST9LQ9H4G1 147 aa13.73□□□□□ -0.21
TNFRSF25-206ENST00000414040 FA2HQ7L5A8 372 aa13.72□□□□□ -0.21
TNFRSF25-206ENST00000414040 KRTAP1-4P0C5Y4 121 aa13.71□□□□□ -0.21
TNFRSF25-206ENST00000414040 SPINK8P0C7L1 97 aa13.71□□□□□ -0.21
TNFRSF25-206ENST00000414040 RHEBQ15382 184 aa13.71□□□□□ -0.21
TNFRSF25-206ENST00000414040 URB1-AS1Q96HZ7 61 aa13.71□□□□□ -0.21
TNFRSF25-206ENST00000414040 C22orf24Q9Y442 160 aa13.71□□□□□ -0.21
TNFRSF25-206ENST00000414040 A0A096LNJ9 63 aa13.7□□□□□ -0.22
TNFRSF25-206ENST00000414040 COX19Q49B96 90 aa13.7□□□□□ -0.22
TNFRSF25-206ENST00000414040 COX7B2Q8TF08 81 aa13.7□□□□□ -0.22
TNFRSF25-206ENST00000414040 PDZD11Q5EBL8 140 aa13.69□□□□□ -0.22
TNFRSF25-206ENST00000414040 SMCO4Q9NRQ5 59 aa13.69□□□□□ -0.22
TNFRSF25-206ENST00000414040 PMVKQ15126 192 aa13.68□□□□□ -0.22
TNFRSF25-206ENST00000414040 CXCL5P42830 114 aa13.67□□□□□ -0.22
TNFRSF25-206ENST00000414040 LINC01549A6NIU2 74 aa13.65□□□□□ -0.22
TNFRSF25-206ENST00000414040 C18orf32Q8TCD1 76 aa13.65□□□□□ -0.22
TNFRSF25-206ENST00000414040 PMCHL1Q16048 86 aa13.64□□□□□ -0.23
TNFRSF25-206ENST00000414040 RAB5BP61020 215 aa13.63□□□□□ -0.23
TNFRSF25-206ENST00000414040 TRAPPC1Q9Y5R8 145 aa13.63□□□□□ -0.23
TNFRSF25-206ENST00000414040 RNF213Q63HN8 5207 aa13.63□□□□□ -0.23
TNFRSF25-206ENST00000414040 MRPL55Q7Z7F7 128 aaKnown RBP13.62□□□□□ -0.23
TNFRSF25-206ENST00000414040 IGLC3P0DOY3 106 aa13.61□□□□□ -0.23
TNFRSF25-206ENST00000414040 ZNF861PO60384 105 aa13.6□□□□□ -0.23
TNFRSF25-206ENST00000414040 NDUFA6P56556 154 aa13.6□□□□□ -0.23
TNFRSF25-206ENST00000414040 LBHQ53QV2 105 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF25-206ENST00000414040 TP73-AS1Q9UF72 201 aa13.6□□□□□ -0.23
TNFRSF25-206ENST00000414040 LPAP08519 4548 aa13.59□□□□□ -0.23
TNFRSF25-206ENST00000414040 RPL37AP8A6NKH3 93 aa13.59□□□□□ -0.23
TNFRSF25-206ENST00000414040 APOC3P02656 99 aa13.59□□□□□ -0.23
TNFRSF25-206ENST00000414040 LINC00614P0C842 121 aa13.59□□□□□ -0.23
TNFRSF25-206ENST00000414040 ZNF22P17026 224 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF25-206ENST00000414040 LINC00167Q96N53 147 aa13.59□□□□□ -0.23
TNFRSF25-206ENST00000414040 IGLV1-50A0A075B6I6 118 aa13.58□□□□□ -0.24
TNFRSF25-206ENST00000414040 GAGE10A6NGK3 116 aa13.58□□□□□ -0.24
TNFRSF25-206ENST00000414040 NUPR1O60356 82 aa13.58□□□□□ -0.24
TNFRSF25-206ENST00000414040 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
TNFRSF25-206ENST00000414040 HBDP02042 147 aa13.57□□□□□ -0.24
TNFRSF25-206ENST00000414040 H3BRM9 83 aa13.56□□□□□ -0.24
TNFRSF25-206ENST00000414040 SCO1O75880 301 aa13.56□□□□□ -0.24
TNFRSF25-206ENST00000414040 PFN2P35080 140 aa13.54□□□□□ -0.24
TNFRSF25-206ENST00000414040 IGLV5-37A0A075B6J1 123 aa13.53□□□□□ -0.24
TNFRSF25-206ENST00000414040 C11orf86A6NJI1 115 aa13.53□□□□□ -0.24
TNFRSF25-206ENST00000414040 BCE1O60756 84 aa13.53□□□□□ -0.24
TNFRSF25-206ENST00000414040 ATP5LO75964 103 aa13.53□□□□□ -0.24
TNFRSF25-206ENST00000414040 YPEL4Q96NS1 127 aa13.52□□□□□ -0.25
TNFRSF25-206ENST00000414040 SNAPINO95295 136 aa13.5□□□□□ -0.25
TNFRSF25-206ENST00000414040 BAGE3Q86Y29 109 aa13.5□□□□□ -0.25
TNFRSF25-206ENST00000414040 SVBPQ8N300 66 aa13.5□□□□□ -0.25
TNFRSF25-206ENST00000414040 ZNF625Q96I27 306 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF25-206ENST00000414040 A0A087X002 238 aa13.48□□□□□ -0.25
TNFRSF25-206ENST00000414040 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
TNFRSF25-206ENST00000414040 NKAPP1Q8N9T2 125 aa13.48□□□□□ -0.25
TNFRSF25-206ENST00000414040 Q8NDZ9 215 aa13.48□□□□□ -0.25
TNFRSF25-206ENST00000414040 SND1-IT1Q9HBX3 110 aa13.48□□□□□ -0.25
TNFRSF25-206ENST00000414040 ERG28Q9UKR5 140 aa13.48□□□□□ -0.25
TNFRSF25-206ENST00000414040 IGKV2-28A0A075B6P5 120 aa13.47□□□□□ -0.25
TNFRSF25-206ENST00000414040 IGKV2D-28P01615 120 aa13.47□□□□□ -0.25
TNFRSF25-206ENST00000414040 RPL13AP40429 203 aaKnown RBP13.47□□□□□ -0.25
TNFRSF25-206ENST00000414040 NDUFA5Q16718 116 aa13.47□□□□□ -0.25
TNFRSF25-206ENST00000414040 TMEM170BQ5T4T1 132 aa13.47□□□□□ -0.25
TNFRSF25-206ENST00000414040 KRTAP13-1Q8IUC0 172 aa13.47□□□□□ -0.25
TNFRSF25-206ENST00000414040 VPREB1P12018 145 aa13.46□□□□□ -0.25
TNFRSF25-206ENST00000414040 ANAPC11Q9NYG5 84 aa13.45□□□□□ -0.26
TNFRSF25-206ENST00000414040 CHTOPQ9Y3Y2 248 aaKnown RBP13.44□□□□□ -0.26
TNFRSF25-206ENST00000414040 CBLN2Q8IUK8 224 aa13.41□□□□□ -0.26
TNFRSF25-206ENST00000414040 TMEM238C9JI98 176 aa13.4□□□□□ -0.26
TNFRSF25-206ENST00000414040 UBE2AP49459 152 aa13.4□□□□□ -0.26
TNFRSF25-206ENST00000414040 PRLHP81277 87 aa13.39□□□□□ -0.27
TNFRSF25-206ENST00000414040 IFI27L1Q96BM0 104 aa13.39□□□□□ -0.27
TNFRSF25-206ENST00000414040 CHCHD1Q96BP2 118 aaKnown RBP13.39□□□□□ -0.27
TNFRSF25-206ENST00000414040 TMEM223A0PJW6 202 aa13.38□□□□□ -0.27
TNFRSF25-206ENST00000414040 TSPAN13O95857 204 aa13.38□□□□□ -0.27
TNFRSF25-206ENST00000414040 COX17Q14061 63 aa13.38□□□□□ -0.27
TNFRSF25-206ENST00000414040 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
TNFRSF25-206ENST00000414040 PRR4Q16378 134 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms