RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 C6orf226Q5I0X4 101 aa16.21■□□□□ 0.19
VEGFA-207ENST00000413642 KRTAP11-1Q8IUC1 163 aa16.21■□□□□ 0.19
VEGFA-207ENST00000413642 SMCO4Q9NRQ5 59 aa16.21■□□□□ 0.19
VEGFA-207ENST00000413642 TRAPPC1Q9Y5R8 145 aa16.21■□□□□ 0.19
VEGFA-207ENST00000413642 CKS1BP61024 79 aa16.2■□□□□ 0.18
VEGFA-207ENST00000413642 Q8IZM0 81 aa16.2■□□□□ 0.18
VEGFA-207ENST00000413642 URB1-AS1Q96HZ7 61 aa16.2■□□□□ 0.18
VEGFA-207ENST00000413642 CST9LQ9H4G1 147 aa16.2■□□□□ 0.18
VEGFA-207ENST00000413642 NDUFC2-KCTD14E9PQ53 114 aa16.19■□□□□ 0.18
VEGFA-207ENST00000413642 C9orf129Q5T035 196 aaKnown RBP16.19■□□□□ 0.18
VEGFA-207ENST00000413642 LINC00469Q8N7U9 141 aa16.19■□□□□ 0.18
VEGFA-207ENST00000413642 HMCN2Q8NDA2 5059 aa16.18■□□□□ 0.18
VEGFA-207ENST00000413642 C18orf32Q8TCD1 76 aa16.17■□□□□ 0.18
VEGFA-207ENST00000413642 LINC01600Q96MT4 127 aa16.17■□□□□ 0.18
VEGFA-207ENST00000413642 A0A096LNJ9 63 aa16.16■□□□□ 0.18
VEGFA-207ENST00000413642 TINCRA0A1B0GVN0 87 aa16.16■□□□□ 0.18
VEGFA-207ENST00000413642 SNAPINO95295 136 aa16.16■□□□□ 0.18
VEGFA-207ENST00000413642 C1orf137Q5JT78 98 aa16.16■□□□□ 0.18
VEGFA-207ENST00000413642 SVBPQ8N300 66 aa16.16■□□□□ 0.18
VEGFA-207ENST00000413642 LINC01549A6NIU2 74 aa16.15■□□□□ 0.18
VEGFA-207ENST00000413642 SMIM1B2RUZ4 78 aa16.15■□□□□ 0.18
VEGFA-207ENST00000413642 NDUFA5Q16718 116 aa16.15■□□□□ 0.18
VEGFA-207ENST00000413642 PMVKQ15126 192 aa16.14■□□□□ 0.17
VEGFA-207ENST00000413642 IGLV5-45A0A087WSX0 123 aa16.13■□□□□ 0.17
VEGFA-207ENST00000413642 ODF1Q14990 250 aa16.13■□□□□ 0.17
VEGFA-207ENST00000413642 SPINK8P0C7L1 97 aa16.12■□□□□ 0.17
VEGFA-207ENST00000413642 PMCHL1Q16048 86 aa16.12■□□□□ 0.17
VEGFA-207ENST00000413642 M0QXV9 152 aa16.11■□□□□ 0.17
VEGFA-207ENST00000413642 LINC00614P0C842 121 aa16.11■□□□□ 0.17
VEGFA-207ENST00000413642 XAGE1AQ9HD64 81 aa16.11■□□□□ 0.17
VEGFA-207ENST00000413642 F8VRH5 84 aa16.1■□□□□ 0.17
VEGFA-207ENST00000413642 PDZD11Q5EBL8 140 aa16.1■□□□□ 0.17
VEGFA-207ENST00000413642 REG3GQ6UW15 175 aa16.1■□□□□ 0.17
VEGFA-207ENST00000413642 YPEL4Q96NS1 127 aa16.1■□□□□ 0.17
VEGFA-207ENST00000413642 PLA2G2DQ9UNK4 145 aa16.1■□□□□ 0.17
VEGFA-207ENST00000413642 NDUFA6P56556 154 aa16.09■□□□□ 0.17
VEGFA-207ENST00000413642 COX7B2Q8TF08 81 aa16.09■□□□□ 0.17
VEGFA-207ENST00000413642 IGLV7-43P04211 117 aa16.06■□□□□ 0.16
VEGFA-207ENST00000413642 KRTAP10-8P60410 259 aa16.06■□□□□ 0.16
VEGFA-207ENST00000413642 HBDP02042 147 aa16.05■□□□□ 0.16
VEGFA-207ENST00000413642 CXCL5P42830 114 aa16.05■□□□□ 0.16
VEGFA-207ENST00000413642 UBE2BP63146 152 aa16.05■□□□□ 0.16
VEGFA-207ENST00000413642 IGLC3P0DOY3 106 aa16.04■□□□□ 0.16
VEGFA-207ENST00000413642 TNXBP22105 4242 aa16.03■□□□□ 0.16
VEGFA-207ENST00000413642 C22orf24Q9Y442 160 aa16.01■□□□□ 0.15
VEGFA-207ENST00000413642 H3BRM9 83 aa16■□□□□ 0.15
VEGFA-207ENST00000413642 CBLN2Q8IUK8 224 aa16■□□□□ 0.15
VEGFA-207ENST00000413642 ZNF22P17026 224 aaPredicted RBP15.99■□□□□ 0.15
VEGFA-207ENST00000413642 RAB5BP61020 215 aa15.99■□□□□ 0.15
VEGFA-207ENST00000413642 BAGE3Q86Y29 109 aa15.97■□□□□ 0.15
VEGFA-207ENST00000413642 IGLV5-39A0A0G2JS06 123 aa15.96■□□□□ 0.15
VEGFA-207ENST00000413642 ATP5LO75964 103 aa15.96■□□□□ 0.15
VEGFA-207ENST00000413642 DIRC1Q969H9 104 aa15.96■□□□□ 0.15
VEGFA-207ENST00000413642 C11orf86A6NJI1 115 aa15.95■□□□□ 0.14
VEGFA-207ENST00000413642 SLC7A5P1Q8MH63 180 aa15.94■□□□□ 0.14
VEGFA-207ENST00000413642 H0Y9J4 135 aa15.93■□□□□ 0.14
VEGFA-207ENST00000413642 LBHQ53QV2 105 aaPredicted RBP15.91■□□□□ 0.14
VEGFA-207ENST00000413642 MRPL55Q7Z7F7 128 aaKnown RBP15.9■□□□□ 0.14
VEGFA-207ENST00000413642 CHCHD1Q96BP2 118 aaKnown RBP15.9■□□□□ 0.14
VEGFA-207ENST00000413642 PFN2P35080 140 aa15.89■□□□□ 0.13
VEGFA-207ENST00000413642 TMEM170BQ5T4T1 132 aa15.89■□□□□ 0.13
VEGFA-207ENST00000413642 PRR26Q8N8Z3 221 aa15.89■□□□□ 0.13
VEGFA-207ENST00000413642 CHTOPQ9Y3Y2 248 aaKnown RBP15.89■□□□□ 0.13
VEGFA-207ENST00000413642 TP73-AS1Q9UF72 201 aa15.88■□□□□ 0.13
VEGFA-207ENST00000413642 ZNF625Q96I27 306 aaPredicted RBP15.87■□□□□ 0.13
VEGFA-207ENST00000413642 LINC00167Q96N53 147 aa15.87■□□□□ 0.13
VEGFA-207ENST00000413642 GAGE10A6NGK3 116 aa15.86■□□□□ 0.13
VEGFA-207ENST00000413642 RPL37AP8A6NKH3 93 aa15.86■□□□□ 0.13
VEGFA-207ENST00000413642 TRGC2P03986 189 aa15.86■□□□□ 0.13
VEGFA-207ENST00000413642 FAM19A2Q8N3H0 131 aa15.86■□□□□ 0.13
VEGFA-207ENST00000413642 IFI27L1Q96BM0 104 aa15.86■□□□□ 0.13
VEGFA-207ENST00000413642 KRTAP1-4P0C5Y4 121 aa15.85■□□□□ 0.13
VEGFA-207ENST00000413642 SCO1O75880 301 aa15.83■□□□□ 0.12
VEGFA-207ENST00000413642 ERG28Q9UKR5 140 aa15.83■□□□□ 0.12
VEGFA-207ENST00000413642 NUPR1O60356 82 aa15.82■□□□□ 0.12
VEGFA-207ENST00000413642 ZNF861PO60384 105 aa15.82■□□□□ 0.12
VEGFA-207ENST00000413642 UBR4Q5T4S7 5183 aa15.81■□□□□ 0.12
VEGFA-207ENST00000413642 IGLV5-37A0A075B6J1 123 aa15.81■□□□□ 0.12
VEGFA-207ENST00000413642 HSBP1O75506 76 aa15.81■□□□□ 0.12
VEGFA-207ENST00000413642 TRAV12-1A0A0B4J245 112 aa15.8■□□□□ 0.12
VEGFA-207ENST00000413642 SND1-IT1Q9HBX3 110 aa15.8■□□□□ 0.12
VEGFA-207ENST00000413642 TMEM223A0PJW6 202 aa15.79■□□□□ 0.12
VEGFA-207ENST00000413642 LINC00310P59036 64 aa15.79■□□□□ 0.12
VEGFA-207ENST00000413642 NKAPP1Q8N9T2 125 aa15.78■□□□□ 0.12
VEGFA-207ENST00000413642 BCE1O60756 84 aa15.77■□□□□ 0.12
VEGFA-207ENST00000413642 SERF1AO75920 110 aa15.75■□□□□ 0.11
VEGFA-207ENST00000413642 Q8NDZ9 215 aa15.75■□□□□ 0.11
VEGFA-207ENST00000413642 COLCA2A8K830 154 aa15.74■□□□□ 0.11
VEGFA-207ENST00000413642 H0Y8G0 127 aa15.74■□□□□ 0.11
VEGFA-207ENST00000413642 VPREB1P12018 145 aa15.74■□□□□ 0.11
VEGFA-207ENST00000413642 IGLV1-50A0A075B6I6 118 aa15.73■□□□□ 0.11
VEGFA-207ENST00000413642 COX17Q14061 63 aa15.73■□□□□ 0.11
VEGFA-207ENST00000413642 IGKV2-28A0A075B6P5 120 aa15.72■□□□□ 0.11
VEGFA-207ENST00000413642 A0A0U1RRA0 63 aa15.72■□□□□ 0.11
VEGFA-207ENST00000413642 IGKV2D-28P01615 120 aa15.72■□□□□ 0.11
VEGFA-207ENST00000413642 RPL28P46779 137 aaKnown RBP15.7■□□□□ 0.1
VEGFA-207ENST00000413642 LINC00158P58513 81 aa15.7■□□□□ 0.1
VEGFA-207ENST00000413642 SFTA2Q6UW10 78 aa15.69■□□□□ 0.1
VEGFA-207ENST00000413642 LEPROTL1O95214 131 aa15.68■□□□□ 0.1
VEGFA-207ENST00000413642 FABP4P15090 132 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms