RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 CXCL5P42830 114 aa5.49□□□□□ -1.53
HDAC9-207ENST00000413509 C1orf43Q9BWL3 253 aa5.49□□□□□ -1.53
HDAC9-207ENST00000413509 KRTAP1-5Q9BYS1 174 aa5.49□□□□□ -1.53
HDAC9-207ENST00000413509 DNAH2Q9P225 4427 aa5.48□□□□□ -1.53
HDAC9-207ENST00000413509 MALP21145 153 aa5.48□□□□□ -1.53
HDAC9-207ENST00000413509 GCSHP23434 173 aa5.48□□□□□ -1.53
HDAC9-207ENST00000413509 BATFQ16520 125 aa5.48□□□□□ -1.53
HDAC9-207ENST00000413509 C15orf56Q8N910 161 aa5.48□□□□□ -1.53
HDAC9-207ENST00000413509 MUC7Q8TAX7 377 aa5.48□□□□□ -1.53
HDAC9-207ENST00000413509 GVQW2A0A096LPI5 108 aaPredicted RBP5.47□□□□□ -1.53
HDAC9-207ENST00000413509 A6NDN8 102 aa5.47□□□□□ -1.53
HDAC9-207ENST00000413509 F8WDY8 70 aa5.47□□□□□ -1.53
HDAC9-207ENST00000413509 PRSS2P07478 247 aa5.47□□□□□ -1.53
HDAC9-207ENST00000413509 IFITM1P13164 125 aa5.47□□□□□ -1.53
HDAC9-207ENST00000413509 SPAG11BQ08648 103 aa5.47□□□□□ -1.53
HDAC9-207ENST00000413509 SRSF9Q13242 221 aaKnown RBP eCLIP5.47□□□□□ -1.53
HDAC9-207ENST00000413509 C6orf226Q5I0X4 101 aa5.47□□□□□ -1.53
HDAC9-207ENST00000413509 RMI2Q96E14 147 aa5.47□□□□□ -1.53
HDAC9-207ENST00000413509 TOMM7Q9P0U1 55 aa5.47□□□□□ -1.53
HDAC9-207ENST00000413509 KMT2AQ03164 3969 aa5.47□□□□□ -1.53
HDAC9-207ENST00000413509 IGKV2D-24A0A075B6R9 120 aa5.46□□□□□ -1.54
HDAC9-207ENST00000413509 TAX1BP3O14907 124 aa5.46□□□□□ -1.54
HDAC9-207ENST00000413509 CIRBPQ14011 172 aaKnown RBP5.46□□□□□ -1.54
HDAC9-207ENST00000413509 C2orf82Q6UX34 121 aa5.46□□□□□ -1.54
HDAC9-207ENST00000413509 UBE2DNLQ8IWF7 75 aa5.46□□□□□ -1.54
HDAC9-207ENST00000413509 NTN5Q8WTR8 489 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-207ENST00000413509 C2orf48Q96LS8 159 aa5.46□□□□□ -1.54
HDAC9-207ENST00000413509 WWC2-AS2Q96NR7 200 aa5.46□□□□□ -1.54
HDAC9-207ENST00000413509 LOC107984156A0A0G2JMH3 177 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 TMEM238LA0A1B0GVL6 79 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 A6NJY4 79 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 EIF4EBP3O60516 100 aaPredicted RBP5.45□□□□□ -1.54
HDAC9-207ENST00000413509 SMIM13P0DJ93 91 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 CKS1BP61024 79 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 RPL24P83731 157 aaKnown RBP5.45□□□□□ -1.54
HDAC9-207ENST00000413509 COX17Q14061 63 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 TTC32Q5I0X7 151 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 CFAP161Q6P656 301 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 SOSTDC1Q6X4U4 206 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 MUSTN1Q8IVN3 82 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 ARL17AQ8IVW1 177 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 LINC00308Q8TCZ7 52 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 Q9HAA7 133 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 ERG28Q9UKR5 140 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 COX11Q9Y6N1 276 aa5.45□□□□□ -1.54
HDAC9-207ENST00000413509 HECTD4Q9Y4D8 3996 aa5.44□□□□□ -1.54
HDAC9-207ENST00000413509 NBDYA0A0U1RRE5 68 aa5.44□□□□□ -1.54
HDAC9-207ENST00000413509 MEIG1Q5JSS6 88 aa5.44□□□□□ -1.54
HDAC9-207ENST00000413509 CASC10Q5T4H9 136 aa5.44□□□□□ -1.54
HDAC9-207ENST00000413509 C10orf25Q5T742 122 aa5.44□□□□□ -1.54
HDAC9-207ENST00000413509 C6orf223Q8N319 242 aa5.44□□□□□ -1.54
HDAC9-207ENST00000413509 COPS9Q8WXC6 57 aa5.44□□□□□ -1.54
HDAC9-207ENST00000413509 NHP2Q9NX24 153 aaKnown RBP5.44□□□□□ -1.54
HDAC9-207ENST00000413509 FRAS1Q86XX4 4008 aa5.44□□□□□ -1.54
HDAC9-207ENST00000413509 DNAH17Q9UFH2 4485 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 A0A0B4J2C4 111 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 TRBV30A0A0K0K1B3 111 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 A4D1N5 150 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 K7ERJ3 54 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 LCE2BO14633 110 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 CFC1BP0CG36 223 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 CFC1P0CG37 223 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 UNQ6190/PRO20217Q6UXQ8 127 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 MIR7-3HGQ8N6C7 128 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 DAND5Q8N907 189 aa5.43□□□□□ -1.54
HDAC9-207ENST00000413509 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-207ENST00000413509 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
HDAC9-207ENST00000413509 USP17L23D6RBM5 183 aa5.42□□□□□ -1.54
HDAC9-207ENST00000413509 RNF151Q2KHN1 245 aa5.42□□□□□ -1.54
HDAC9-207ENST00000413509 Q6ZRN7 208 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-207ENST00000413509 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
HDAC9-207ENST00000413509 C6orf48Q9UBA6 75 aa5.42□□□□□ -1.54
HDAC9-207ENST00000413509 A0A1B0GV90 55 aa5.41□□□□□ -1.54
HDAC9-207ENST00000413509 C3orf84H3BNL1 204 aa5.41□□□□□ -1.54
HDAC9-207ENST00000413509 ZNF561-AS1K7EIQ3 104 aa5.41□□□□□ -1.54
HDAC9-207ENST00000413509 LINC00158P58513 81 aa5.41□□□□□ -1.54
HDAC9-207ENST00000413509 HIGD2BQ4VC39 106 aa5.41□□□□□ -1.54
HDAC9-207ENST00000413509 Q6ZR54 194 aa5.41□□□□□ -1.54
HDAC9-207ENST00000413509 A0A0U1RRA0 63 aa5.4□□□□□ -1.54
HDAC9-207ENST00000413509 PFN2P35080 140 aa5.4□□□□□ -1.54
HDAC9-207ENST00000413509 C9orf116Q5BN46 136 aaPredicted RBP5.4□□□□□ -1.54
HDAC9-207ENST00000413509 Q6ZRU5 148 aa5.4□□□□□ -1.54
HDAC9-207ENST00000413509 PRO1854Q9UHT4 67 aa5.4□□□□□ -1.54
HDAC9-207ENST00000413509 SACSQ9NZJ4 4579 aa5.4□□□□□ -1.55
HDAC9-207ENST00000413509 SLPIP03973 132 aa5.39□□□□□ -1.55
HDAC9-207ENST00000413509 NPC2P61916 151 aa5.39□□□□□ -1.55
HDAC9-207ENST00000413509 SYCNQ0VAF6 134 aa5.39□□□□□ -1.55
HDAC9-207ENST00000413509 CAMK2N2Q96S95 79 aa5.39□□□□□ -1.55
HDAC9-207ENST00000413509 SND1-IT1Q9HBX3 110 aa5.39□□□□□ -1.55
HDAC9-207ENST00000413509 IGKV2-28A0A075B6P5 120 aa5.38□□□□□ -1.55
HDAC9-207ENST00000413509 LRCOL1A6NCL2 159 aa5.38□□□□□ -1.55
HDAC9-207ENST00000413509 NDUFC2O95298 119 aa5.38□□□□□ -1.55
HDAC9-207ENST00000413509 TSPAN13O95857 204 aa5.38□□□□□ -1.55
HDAC9-207ENST00000413509 IGKV2D-28P01615 120 aa5.38□□□□□ -1.55
HDAC9-207ENST00000413509 TLX1NBP0CAT3 122 aa5.38□□□□□ -1.55
HDAC9-207ENST00000413509 CNBPP62633 177 aaKnown RBP5.38□□□□□ -1.55
HDAC9-207ENST00000413509 WFDC2Q14508 124 aa5.38□□□□□ -1.55
HDAC9-207ENST00000413509 LINC00476Q8WZB0 136 aa5.38□□□□□ -1.55
HDAC9-207ENST00000413509 RAB37Q96AX2 223 aa5.38□□□□□ -1.55
HDAC9-207ENST00000413509 DNAH11Q96DT5 4516 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms