RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 Q9BRP9 147 aa13.1□□□□□ -0.31
HCG11-201ENST00000411553 LINC00208Q96KT6 92 aa13.09□□□□□ -0.31
HCG11-201ENST00000411553 XGP55808 180 aa13.08□□□□□ -0.32
HCG11-201ENST00000411553 BEAN1Q3B7T3 259 aa13.08□□□□□ -0.32
HCG11-201ENST00000411553 A0A087WYN8 130 aa13.08□□□□□ -0.32
HCG11-201ENST00000411553 LYPD5Q6UWN5 251 aa13.08□□□□□ -0.32
HCG11-201ENST00000411553 ARHGAP32A7KAX9 2087 aa13.08□□□□□ -0.32
HCG11-201ENST00000411553 C2orf48Q96LS8 159 aa13.08□□□□□ -0.32
HCG11-201ENST00000411553 AMELXQ99217 191 aa13.08□□□□□ -0.32
HCG11-201ENST00000411553 A0A1B0GUV1 79 aa13.06□□□□□ -0.32
HCG11-201ENST00000411553 PIEZO1Q92508 2521 aa13.06□□□□□ -0.32
HCG11-201ENST00000411553 TSPEAR-AS2P59090 65 aa13.06□□□□□ -0.32
HCG11-201ENST00000411553 URB1-AS1Q96HZ7 61 aa13.06□□□□□ -0.32
HCG11-201ENST00000411553 TRAV7A0A075B6U4 112 aa13.06□□□□□ -0.32
HCG11-201ENST00000411553 CCDC179H3BU77 68 aa13.05□□□□□ -0.32
HCG11-201ENST00000411553 PRYO14603 147 aa13.05□□□□□ -0.32
HCG11-201ENST00000411553 IGF2RP11717 2491 aa13.05□□□□□ -0.32
HCG11-201ENST00000411553 Q6ZSN1 163 aa13.04□□□□□ -0.32
HCG11-201ENST00000411553 LINC01547P58512 204 aaPredicted RBP13.04□□□□□ -0.32
HCG11-201ENST00000411553 ADAMTSL4-AS1Q5T5F5 129 aa13.03□□□□□ -0.32
HCG11-201ENST00000411553 COX8CQ7Z4L0 72 aa13.03□□□□□ -0.32
HCG11-201ENST00000411553 RETNLBQ9BQ08 111 aa13.03□□□□□ -0.32
HCG11-201ENST00000411553 LRP4O75096 1905 aa13.02□□□□□ -0.33
HCG11-201ENST00000411553 Q6Q795 121 aa13.02□□□□□ -0.33
HCG11-201ENST00000411553 TRBV7-6A0A0J9YX20 115 aa13.02□□□□□ -0.33
HCG11-201ENST00000411553 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
HCG11-201ENST00000411553 NHLRC4P0CG21 123 aaPredicted RBP13.01□□□□□ -0.33
HCG11-201ENST00000411553 LINC00310P59036 64 aa13.01□□□□□ -0.33
HCG11-201ENST00000411553 X6R8D5 127 aa13.01□□□□□ -0.33
HCG11-201ENST00000411553 A0A087WSZ3 146 aa13□□□□□ -0.33
HCG11-201ENST00000411553 LINC00575Q6W349 94 aa13□□□□□ -0.33
HCG11-201ENST00000411553 LINC01561Q8N1V8 128 aa12.99□□□□□ -0.33
HCG11-201ENST00000411553 PIEZO2Q9H5I5 2752 aa12.98□□□□□ -0.33
HCG11-201ENST00000411553 RAI1Q7Z5J4 1906 aaPredicted RBP12.98□□□□□ -0.33
HCG11-201ENST00000411553 A0A087WVE0 104 aa12.97□□□□□ -0.33
HCG11-201ENST00000411553 SMIM26A0A096LP01 95 aa12.97□□□□□ -0.33
HCG11-201ENST00000411553 Q6ZRU5 148 aa12.97□□□□□ -0.33
HCG11-201ENST00000411553 FHL3Q13643 280 aa12.96□□□□□ -0.34
HCG11-201ENST00000411553 PCOTHQ58A44 107 aa12.95□□□□□ -0.34
HCG11-201ENST00000411553 Q8N3U1 123 aa12.95□□□□□ -0.34
HCG11-201ENST00000411553 LIMD2Q9BT23 127 aa12.95□□□□□ -0.34
HCG11-201ENST00000411553 Q8N2B8 174 aa12.93□□□□□ -0.34
HCG11-201ENST00000411553 PRLHP81277 87 aa12.93□□□□□ -0.34
HCG11-201ENST00000411553 DEFB116Q30KQ4 102 aa12.93□□□□□ -0.34
HCG11-201ENST00000411553 MYO9AB2RTY4 2548 aa12.93□□□□□ -0.34
HCG11-201ENST00000411553 SPINK1P00995 79 aa12.92□□□□□ -0.34
HCG11-201ENST00000411553 EXPH5Q8NEV8 1989 aa12.92□□□□□ -0.34
HCG11-201ENST00000411553 H0Y9P7 68 aa12.91□□□□□ -0.34
HCG11-201ENST00000411553 C22orf24Q9Y442 160 aa12.9□□□□□ -0.34
HCG11-201ENST00000411553 TRBV7-7A0A0K0K1E9 115 aa12.9□□□□□ -0.35
HCG11-201ENST00000411553 EML5Q05BV3 1969 aa12.89□□□□□ -0.35
HCG11-201ENST00000411553 A0A096LNJ9 63 aa12.89□□□□□ -0.35
HCG11-201ENST00000411553 SMCR5Q8TEV8 140 aa12.89□□□□□ -0.35
HCG11-201ENST00000411553 A8MTW9 85 aa12.88□□□□□ -0.35
HCG11-201ENST00000411553 SBSPONQ8IVN8 264 aa12.88□□□□□ -0.35
HCG11-201ENST00000411553 SOSTDC1Q6X4U4 206 aa12.88□□□□□ -0.35
HCG11-201ENST00000411553 HCG22E2RYF7 251 aa12.86□□□□□ -0.35
HCG11-201ENST00000411553 COL5A1P20908 1838 aaPredicted RBP12.86□□□□□ -0.35
HCG11-201ENST00000411553 MDFIQ99750 246 aa12.86□□□□□ -0.35
HCG11-201ENST00000411553 PTPRSQ13332 1948 aa12.86□□□□□ -0.35
HCG11-201ENST00000411553 C11orf72Q8NBR9 251 aa12.84□□□□□ -0.35
HCG11-201ENST00000411553 C1orf195Q5TG92 126 aa12.83□□□□□ -0.36
HCG11-201ENST00000411553 LINC00337Q8N6G1 96 aa12.83□□□□□ -0.36
HCG11-201ENST00000411553 JMJD1CQ15652 2540 aa12.82□□□□□ -0.36
HCG11-201ENST00000411553 KIF25-AS1Q9Y6Z4 181 aa12.81□□□□□ -0.36
HCG11-201ENST00000411553 AGRNO00468 2067 aa12.78□□□□□ -0.36
HCG11-201ENST00000411553 LINC00846Q9NV44 126 aa12.78□□□□□ -0.36
HCG11-201ENST00000411553 CPAMD8Q8IZJ3 1885 aa12.78□□□□□ -0.36
HCG11-201ENST00000411553 PMAIP1Q13794 54 aa12.78□□□□□ -0.36
HCG11-201ENST00000411553 TMEM254Q8TBM7 123 aa12.78□□□□□ -0.36
HCG11-201ENST00000411553 IGLV5-39A0A0G2JS06 123 aa12.77□□□□□ -0.37
HCG11-201ENST00000411553 KIAA0087Q14695 138 aa12.77□□□□□ -0.37
HCG11-201ENST00000411553 TLN1Q9Y490 2541 aaKnown RBP12.77□□□□□ -0.37
HCG11-201ENST00000411553 hDV103S1A0JD37 113 aa12.77□□□□□ -0.37
HCG11-201ENST00000411553 IGKV2D-30A0A075B6S6 120 aa12.76□□□□□ -0.37
HCG11-201ENST00000411553 IGKV2-30P06310 120 aa12.76□□□□□ -0.37
HCG11-201ENST00000411553 IGHV3OR16-9A0A0B4J2B5 98 aa12.75□□□□□ -0.37
HCG11-201ENST00000411553 PSPHP1O15172 72 aa12.74□□□□□ -0.37
HCG11-201ENST00000411553 CXCL6P80162 114 aa12.74□□□□□ -0.37
HCG11-201ENST00000411553 C1orf64Q8NEQ6 169 aa12.74□□□□□ -0.37
HCG11-201ENST00000411553 LINC00167Q96N53 147 aa12.74□□□□□ -0.37
HCG11-201ENST00000411553 ADAMTS20P59510 1910 aa12.74□□□□□ -0.37
HCG11-201ENST00000411553 SPACA4Q8TDM5 124 aa12.74□□□□□ -0.37
HCG11-201ENST00000411553 CRYGAP11844 174 aa12.73□□□□□ -0.37
HCG11-201ENST00000411553 ABCA12Q86UK0 2595 aa12.72□□□□□ -0.37
HCG11-201ENST00000411553 MOBPQ13875 183 aa12.72□□□□□ -0.37
HCG11-201ENST00000411553 C6orf48Q9UBA6 75 aa12.7□□□□□ -0.38
HCG11-201ENST00000411553 H3BNG1 76 aa12.7□□□□□ -0.38
HCG11-201ENST00000411553 ZFYVE26Q68DK2 2539 aa12.7□□□□□ -0.38
HCG11-201ENST00000411553 C7orf65Q6ZTY9 151 aa12.69□□□□□ -0.38
HCG11-201ENST00000411553 FAM19A4Q96LR4 140 aa12.69□□□□□ -0.38
HCG11-201ENST00000411553 LRRK2Q5S007 2527 aa12.69□□□□□ -0.38
HCG11-201ENST00000411553 SPATA3Q8NHX4 192 aa12.68□□□□□ -0.38
HCG11-201ENST00000411553 LINC01546A6NGU7 62 aa12.68□□□□□ -0.38
HCG11-201ENST00000411553 LINC00315P59091 139 aa12.67□□□□□ -0.38
HCG11-201ENST00000411553 SMIM29Q86T20 159 aa12.67□□□□□ -0.38
HCG11-201ENST00000411553 TET2Q6N021 2002 aaPredicted RBP12.66□□□□□ -0.38
HCG11-201ENST00000411553 FAM229AH3BQW9 127 aa12.64□□□□□ -0.39
HCG11-201ENST00000411553 TP53AIP1Q9HCN2 124 aa12.64□□□□□ -0.39
HCG11-201ENST00000411553 FN1P02751 2386 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms