RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SPAG17Q6Q759 2223 aa1.97□□□□□ -2.09
LSM5-205ENST00000409952 NCR3O14931 201 aa1.97□□□□□ -2.09
LSM5-205ENST00000409952 EDDM3BP56851 147 aa1.97□□□□□ -2.09
LSM5-205ENST00000409952 Q86TA4 180 aa1.97□□□□□ -2.09
LSM5-205ENST00000409952 C9orf62Q8N4C0 152 aa1.97□□□□□ -2.09
LSM5-205ENST00000409952 FAM213BQ8TBF2 198 aa1.97□□□□□ -2.09
LSM5-205ENST00000409952 BCORQ6W2J9 1755 aa1.97□□□□□ -2.09
LSM5-205ENST00000409952 FBN1P35555 2871 aaKnown RBP1.96□□□□□ -2.09
LSM5-205ENST00000409952 RGPD8O14715 1765 aaPredicted RBP1.96□□□□□ -2.1
LSM5-205ENST00000409952 RGPD5Q99666 1765 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 USP9YO00507 2555 aaPredicted RBP1.96□□□□□ -2.1
LSM5-205ENST00000409952 IGLC1P0CG04 106 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 SEC11AP67812 179 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 KRTAP13-1Q8IUC0 172 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 MGST2Q99735 147 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 PMCHL2Q9BQD1 86 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 V9GYV3 84 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 SDK1Q7Z5N4 2213 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 PKD1L1Q8TDX9 2849 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 C4BP0C0L5 1744 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 OTOGLQ3ZCN5 2332 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 NBEAL2Q6ZNJ1 2754 aa1.96□□□□□ -2.1
LSM5-205ENST00000409952 CCDC141Q6ZP82 1450 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 MYO15AQ9UKN7 3530 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 FLNAP21333 2647 aaKnown RBP1.95□□□□□ -2.1
LSM5-205ENST00000409952 DOPEY2Q9Y3R5 2298 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 A0A087WTM6 91 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 TRBV30A0A0K0K1B3 111 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 A0A1W2PPM0 123 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 C10orf99Q6UWK7 81 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 LINC00575Q6W349 94 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 TMEM14BQ9NUH8 114 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 LENEPQ9Y5L5 61 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 COL4A1P02462 1669 aa1.95□□□□□ -2.1
LSM5-205ENST00000409952 MRC1P22897 1456 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 COL12A1Q99715 3063 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 DOT1LQ8TEK3 1739 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 TOGARAM1Q9Y4F4 1720 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 SMG1Q96Q15 3661 aaKnown RBP1.94□□□□□ -2.1
LSM5-205ENST00000409952 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.94□□□□□ -2.1
LSM5-205ENST00000409952 CRYM-AS1A6NIL9 109 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 PPP1R17O96001 155 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 EFNA4P52798 201 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 SMIM5Q71RC9 77 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 FAM167A-AS1Q96KT0 104 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 ANKRD36BQ8N2N9 1353 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 IFT172Q9UG01 1749 aa1.94□□□□□ -2.1
LSM5-205ENST00000409952 ANKHD1Q8IWZ3 2542 aaKnown RBP1.93□□□□□ -2.1
LSM5-205ENST00000409952 LOC400499M0QZD8 3231 aa1.93□□□□□ -2.1
LSM5-205ENST00000409952 FREM2Q5SZK8 3169 aa1.93□□□□□ -2.1
LSM5-205ENST00000409952 IQGAP3Q86VI3 1631 aa1.93□□□□□ -2.1
LSM5-205ENST00000409952 DYNLRB1Q9NP97 96 aa1.93□□□□□ -2.1
LSM5-205ENST00000409952 MANBALQ9NQG1 85 aa1.93□□□□□ -2.1
LSM5-205ENST00000409952 NDUFA4L2Q9NRX3 87 aa1.93□□□□□ -2.1
LSM5-205ENST00000409952 PRRC2BQ5JSZ5 2229 aaKnown RBP1.93□□□□□ -2.1
LSM5-205ENST00000409952 PPLO60437 1756 aa1.93□□□□□ -2.1
LSM5-205ENST00000409952 TRIOO75962 3097 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 COL6A5A8TX70 2615 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 F8P00451 2351 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 DDX60LQ5H9U9 1706 aaKnown RBP1.92□□□□□ -2.1
LSM5-205ENST00000409952 CHKB-CPT1BH3BT56 60 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 ATOX1O00244 68 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 ASIPP42127 132 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 CHD7Q9P2D1 2997 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 UQCR10Q9UDW1 63 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 DNHD1Q96M86 4753 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 PLXNA1Q9UIW2 1896 aa1.92□□□□□ -2.1
LSM5-205ENST00000409952 PTPRQQ9UMZ3 2332 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 ZFHX3Q15911 3703 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 TECTAO75443 2155 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 NDUFC1O43677 76 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 SFT2D2O95562 160 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 UBE2D3P61077 147 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 UBE2D2P62837 147 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 Q5VV11 94 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 NPVFQ9HCQ7 196 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 ZGRF1Q86YA3 2104 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 CRYBG3Q68DQ2 2970 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 NRXN2Q9P2S2 1712 aa1.91□□□□□ -2.1
LSM5-205ENST00000409952 TRAV22A0A0B4J277 110 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 LOC285095A0A1B0GVY8 99 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 PRB1P04280 392 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 SPAG11BQ08648 103 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 SPAG11AQ6PDA7 123 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 FAIMQ9NVQ4 179 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 PRO1854Q9UHT4 67 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 R4GMQ9 66 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 TLN2Q9Y4G6 2542 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 LRBAP50851 2863 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 ARFGEF2Q9Y6D5 1785 aa1.9□□□□□ -2.11
LSM5-205ENST00000409952 CENPEQ02224 2701 aa1.89□□□□□ -2.11
LSM5-205ENST00000409952 PHIPQ8WWQ0 1821 aa1.89□□□□□ -2.11
LSM5-205ENST00000409952 LRRC37AA6NMS7 1700 aa1.89□□□□□ -2.11
LSM5-205ENST00000409952 TRBV7-7A0A0K0K1E9 115 aa1.89□□□□□ -2.11
LSM5-205ENST00000409952 GYPAP02724 150 aa1.89□□□□□ -2.11
LSM5-205ENST00000409952 CCL18P55774 89 aa1.89□□□□□ -2.11
LSM5-205ENST00000409952 WFDC6Q9BQY6 131 aa1.89□□□□□ -2.11
LSM5-205ENST00000409952 CDC42SE2Q9NRR3 84 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms