RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 NDUFC2O95298 119 aa11.86□□□□□ -0.51
PCDHA13-202ENST00000409494 UPK3BQ9BT76 320 aa11.86□□□□□ -0.51
PCDHA13-202ENST00000409494 LINC00694P0DN24 101 aa11.85□□□□□ -0.51
PCDHA13-202ENST00000409494 A0A096LNT2 108 aa11.84□□□□□ -0.51
PCDHA13-202ENST00000409494 NDUFC2-KCTD14E9PQ53 114 aa11.84□□□□□ -0.51
PCDHA13-202ENST00000409494 LINC01556Q5JQF7 62 aa11.84□□□□□ -0.51
PCDHA13-202ENST00000409494 C3orf22Q8N5N4 141 aa11.84□□□□□ -0.51
PCDHA13-202ENST00000409494 SMIM11BQ8TCY0 68 aa11.84□□□□□ -0.51
PCDHA13-202ENST00000409494 LINC00526Q96FQ7 95 aa11.84□□□□□ -0.51
PCDHA13-202ENST00000409494 POLQO75417 2590 aa11.84□□□□□ -0.51
PCDHA13-202ENST00000409494 IGKV2-28A0A075B6P5 120 aa11.83□□□□□ -0.51
PCDHA13-202ENST00000409494 IGKV2D-28P01615 120 aa11.83□□□□□ -0.51
PCDHA13-202ENST00000409494 Q6ZQY7 126 aa11.83□□□□□ -0.51
PCDHA13-202ENST00000409494 ACANP16112 2415 aa11.83□□□□□ -0.51
PCDHA13-202ENST00000409494 FAM240AA0A1B0GVK7 77 aa11.83□□□□□ -0.52
PCDHA13-202ENST00000409494 PLAC8L1A1L4L8 177 aa11.83□□□□□ -0.52
PCDHA13-202ENST00000409494 ADAMTSL4-AS1Q5T5F5 129 aa11.82□□□□□ -0.52
PCDHA13-202ENST00000409494 Q6ZSN1 163 aa11.82□□□□□ -0.52
PCDHA13-202ENST00000409494 F8P00451 2351 aa11.82□□□□□ -0.52
PCDHA13-202ENST00000409494 Q6Q795 121 aa11.81□□□□□ -0.52
PCDHA13-202ENST00000409494 IGLV5-52A0A0A0MRZ9 124 aa11.81□□□□□ -0.52
PCDHA13-202ENST00000409494 BPTFQ12830 3046 aa11.81□□□□□ -0.52
PCDHA13-202ENST00000409494 M0QXV9 152 aa11.81□□□□□ -0.52
PCDHA13-202ENST00000409494 LRCOL1A6NCL2 159 aa11.8□□□□□ -0.52
PCDHA13-202ENST00000409494 CCKP06307 115 aa11.8□□□□□ -0.52
PCDHA13-202ENST00000409494 WFDC10BQ8IUB3 73 aa11.8□□□□□ -0.52
PCDHA13-202ENST00000409494 C20orf197Q8N268 126 aa11.79□□□□□ -0.52
PCDHA13-202ENST00000409494 COX6A2Q02221 97 aa11.79□□□□□ -0.52
PCDHA13-202ENST00000409494 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
PCDHA13-202ENST00000409494 X6R8D5 127 aa11.79□□□□□ -0.52
PCDHA13-202ENST00000409494 CCDC179H3BU77 68 aa11.77□□□□□ -0.52
PCDHA13-202ENST00000409494 LINC00315P59091 139 aa11.77□□□□□ -0.52
PCDHA13-202ENST00000409494 C6orf223Q8N319 242 aa11.76□□□□□ -0.53
PCDHA13-202ENST00000409494 PRYO14603 147 aa11.76□□□□□ -0.53
PCDHA13-202ENST00000409494 A0A096LNI7 61 aa11.75□□□□□ -0.53
PCDHA13-202ENST00000409494 REG3GQ6UW15 175 aa11.75□□□□□ -0.53
PCDHA13-202ENST00000409494 CHD7Q9P2D1 2997 aa11.75□□□□□ -0.53
PCDHA13-202ENST00000409494 CELA1Q9UNI1 258 aa11.75□□□□□ -0.53
PCDHA13-202ENST00000409494 SERP2Q8N6R1 65 aa11.74□□□□□ -0.53
PCDHA13-202ENST00000409494 A8MTW9 85 aa11.74□□□□□ -0.53
PCDHA13-202ENST00000409494 RPL37AP8A6NKH3 93 aa11.73□□□□□ -0.53
PCDHA13-202ENST00000409494 CHKB-CPT1BH3BT56 60 aa11.73□□□□□ -0.53
PCDHA13-202ENST00000409494 Q6JHZ5 121 aa11.73□□□□□ -0.53
PCDHA13-202ENST00000409494 COX7CP15954 63 aa11.72□□□□□ -0.53
PCDHA13-202ENST00000409494 TRBV10-3A0A0K0K1G6 114 aa11.71□□□□□ -0.53
PCDHA13-202ENST00000409494 IGLV5-39A0A0G2JS06 123 aa11.71□□□□□ -0.54
PCDHA13-202ENST00000409494 IGHV3OR16-9A0A0B4J2B5 98 aa11.7□□□□□ -0.54
PCDHA13-202ENST00000409494 SCXQ7RTU7 201 aa11.7□□□□□ -0.54
PCDHA13-202ENST00000409494 C10orf25Q5T742 122 aa11.7□□□□□ -0.54
PCDHA13-202ENST00000409494 SBSPONQ8IVN8 264 aa11.7□□□□□ -0.54
PCDHA13-202ENST00000409494 Q8NAQ8 132 aa11.7□□□□□ -0.54
PCDHA13-202ENST00000409494 ESRGQ1W209 222 aa11.69□□□□□ -0.54
PCDHA13-202ENST00000409494 MRPL55Q7Z7F7 128 aaKnown RBP11.68□□□□□ -0.54
PCDHA13-202ENST00000409494 FLNBO75369 2602 aaKnown RBP11.68□□□□□ -0.54
PCDHA13-202ENST00000409494 MDFIQ99750 246 aa11.68□□□□□ -0.54
PCDHA13-202ENST00000409494 FAM236DA0A1B0GTK5 79 aa11.68□□□□□ -0.54
PCDHA13-202ENST00000409494 FAM236CP0DP71 79 aa11.68□□□□□ -0.54
PCDHA13-202ENST00000409494 CDIP1Q9H305 208 aa11.68□□□□□ -0.54
PCDHA13-202ENST00000409494 Q8N814 137 aa11.67□□□□□ -0.54
PCDHA13-202ENST00000409494 PPDPFQ9H3Y8 114 aa11.67□□□□□ -0.54
PCDHA13-202ENST00000409494 NTM-AS1Q6ZSK4 140 aa11.67□□□□□ -0.54
PCDHA13-202ENST00000409494 C9orf116Q5BN46 136 aaPredicted RBP11.66□□□□□ -0.54
PCDHA13-202ENST00000409494 IGLV5-45A0A087WSX0 123 aa11.66□□□□□ -0.54
PCDHA13-202ENST00000409494 PRO0461Q9UI25 63 aa11.65□□□□□ -0.54
PCDHA13-202ENST00000409494 IGKV4-1P06312 121 aa11.64□□□□□ -0.55
PCDHA13-202ENST00000409494 Q6ZRU5 148 aa11.64□□□□□ -0.55
PCDHA13-202ENST00000409494 A0A087WYN8 130 aa11.64□□□□□ -0.55
PCDHA13-202ENST00000409494 SMCPP49901 116 aaPredicted RBP11.64□□□□□ -0.55
PCDHA13-202ENST00000409494 C5orf42Q9H799 3197 aa11.64□□□□□ -0.55
PCDHA13-202ENST00000409494 SPATA3Q8NHX4 192 aa11.64□□□□□ -0.55
PCDHA13-202ENST00000409494 HTTP42858 3142 aa11.63□□□□□ -0.55
PCDHA13-202ENST00000409494 WWC2-AS2Q96NR7 200 aa11.63□□□□□ -0.55
PCDHA13-202ENST00000409494 MUC4Q99102 2169 aa11.62□□□□□ -0.55
PCDHA13-202ENST00000409494 PRR3P79522 188 aaKnown RBP11.59□□□□□ -0.55
PCDHA13-202ENST00000409494 C1orf137Q5JT78 98 aa11.59□□□□□ -0.55
PCDHA13-202ENST00000409494 KRTAP1-3Q8IUG1 177 aa11.59□□□□□ -0.55
PCDHA13-202ENST00000409494 IGLV9-49A0A0B4J1Y8 123 aa11.59□□□□□ -0.55
PCDHA13-202ENST00000409494 C3orf84H3BNL1 204 aa11.59□□□□□ -0.55
PCDHA13-202ENST00000409494 C19orf73Q9NVV2 129 aa11.58□□□□□ -0.56
PCDHA13-202ENST00000409494 LINC00337Q8N6G1 96 aa11.57□□□□□ -0.56
PCDHA13-202ENST00000409494 NBDYA0A0U1RRE5 68 aa11.57□□□□□ -0.56
PCDHA13-202ENST00000409494 CHD9Q3L8U1 2897 aa11.57□□□□□ -0.56
PCDHA13-202ENST00000409494 NDUFC1O43677 76 aa11.57□□□□□ -0.56
PCDHA13-202ENST00000409494 A0A087WVE0 104 aa11.55□□□□□ -0.56
PCDHA13-202ENST00000409494 SEC61GP60059 68 aa11.55□□□□□ -0.56
PCDHA13-202ENST00000409494 SPINK6Q6UWN8 80 aa11.55□□□□□ -0.56
PCDHA13-202ENST00000409494 CSNK1G2-AS1Q8NCQ2 148 aa11.55□□□□□ -0.56
PCDHA13-202ENST00000409494 TRBV7-6A0A0J9YX20 115 aa11.55□□□□□ -0.56
PCDHA13-202ENST00000409494 C5orf47Q569G3 176 aa11.55□□□□□ -0.56
PCDHA13-202ENST00000409494 LINC00575Q6W349 94 aa11.55□□□□□ -0.56
PCDHA13-202ENST00000409494 DNAH10OSP0CZ25 163 aa11.54□□□□□ -0.56
PCDHA13-202ENST00000409494 C22orf24Q9Y442 160 aa11.54□□□□□ -0.56
PCDHA13-202ENST00000409494 CASC2Q6XLA1 102 aa11.54□□□□□ -0.56
PCDHA13-202ENST00000409494 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
PCDHA13-202ENST00000409494 HECTD1Q9ULT8 2610 aa11.53□□□□□ -0.56
PCDHA13-202ENST00000409494 FAM19A3Q7Z5A8 133 aa11.53□□□□□ -0.56
PCDHA13-202ENST00000409494 TRBV7-7A0A0K0K1E9 115 aa11.52□□□□□ -0.57
PCDHA13-202ENST00000409494 Q9UF83 564 aa11.52□□□□□ -0.57
PCDHA13-202ENST00000409494 ATP5EP56381 51 aaPredicted RBP11.51□□□□□ -0.57
PCDHA13-202ENST00000409494 Q9BRP9 147 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms