RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 LINC01546A6NGU7 62 aa11.47□□□□□ -0.57
PTPN18-203ENST00000409022 C2orf82Q6UX34 121 aa11.47□□□□□ -0.57
PTPN18-203ENST00000409022 PLA2G2DQ9UNK4 145 aa11.47□□□□□ -0.57
PTPN18-203ENST00000409022 HMCN2Q8NDA2 5059 aa11.46□□□□□ -0.57
PTPN18-203ENST00000409022 PHF5AQ7RTV0 110 aaKnown RBP11.46□□□□□ -0.57
PTPN18-203ENST00000409022 LINC01600Q96MT4 127 aa11.46□□□□□ -0.57
PTPN18-203ENST00000409022 MT1HL1P0DM35 61 aa11.45□□□□□ -0.58
PTPN18-203ENST00000409022 CXCL5P42830 114 aa11.45□□□□□ -0.58
PTPN18-203ENST00000409022 LINC00469Q8N7U9 141 aa11.45□□□□□ -0.58
PTPN18-203ENST00000409022 CDKN2A-AS1Q9UH64 79 aa11.45□□□□□ -0.58
PTPN18-203ENST00000409022 PSORS1C2Q9UIG4 136 aa11.45□□□□□ -0.58
PTPN18-203ENST00000409022 SRSF9Q13242 221 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTPN18-203ENST00000409022 C1orf137Q5JT78 98 aa11.44□□□□□ -0.58
PTPN18-203ENST00000409022 FAM19A5Q7Z5A7 132 aaPredicted RBP11.44□□□□□ -0.58
PTPN18-203ENST00000409022 TINCRA0A1B0GVN0 87 aa11.43□□□□□ -0.58
PTPN18-203ENST00000409022 SNAPINO95295 136 aa11.43□□□□□ -0.58
PTPN18-203ENST00000409022 SVBPQ8N300 66 aa11.43□□□□□ -0.58
PTPN18-203ENST00000409022 TRAPPC1Q9Y5R8 145 aa11.43□□□□□ -0.58
PTPN18-203ENST00000409022 F8VRH5 84 aa11.42□□□□□ -0.58
PTPN18-203ENST00000409022 APOC3P02656 99 aa11.42□□□□□ -0.58
PTPN18-203ENST00000409022 PMVKQ15126 192 aa11.42□□□□□ -0.58
PTPN18-203ENST00000409022 FAM168BA1KXE4 195 aa11.41□□□□□ -0.58
PTPN18-203ENST00000409022 M0QXV9 152 aa11.41□□□□□ -0.58
PTPN18-203ENST00000409022 UBE2BP63146 152 aa11.41□□□□□ -0.58
PTPN18-203ENST00000409022 PDZD11Q5EBL8 140 aa11.41□□□□□ -0.58
PTPN18-203ENST00000409022 CST9LQ9H4G1 147 aa11.41□□□□□ -0.58
PTPN18-203ENST00000409022 H3BRM9 83 aa11.4□□□□□ -0.58
PTPN18-203ENST00000409022 RAB5BP61020 215 aa11.39□□□□□ -0.59
PTPN18-203ENST00000409022 IGLV5-45A0A087WSX0 123 aa11.38□□□□□ -0.59
PTPN18-203ENST00000409022 SMIM1B2RUZ4 78 aa11.38□□□□□ -0.59
PTPN18-203ENST00000409022 COX7B2Q8TF08 81 aa11.38□□□□□ -0.59
PTPN18-203ENST00000409022 DIRC1Q969H9 104 aa11.38□□□□□ -0.59
PTPN18-203ENST00000409022 IGLV7-43P04211 117 aa11.37□□□□□ -0.59
PTPN18-203ENST00000409022 LINC00614P0C842 121 aa11.37□□□□□ -0.59
PTPN18-203ENST00000409022 C9orf129Q5T035 196 aaKnown RBP11.37□□□□□ -0.59
PTPN18-203ENST00000409022 LBHQ53QV2 105 aaPredicted RBP11.36□□□□□ -0.59
PTPN18-203ENST00000409022 SLC7A5P1Q8MH63 180 aa11.36□□□□□ -0.59
PTPN18-203ENST00000409022 HBDP02042 147 aa11.35□□□□□ -0.59
PTPN18-203ENST00000409022 NDUFA6P56556 154 aa11.35□□□□□ -0.59
PTPN18-203ENST00000409022 C18orf32Q8TCD1 76 aa11.35□□□□□ -0.59
PTPN18-203ENST00000409022 ATP5LO75964 103 aa11.33□□□□□ -0.6
PTPN18-203ENST00000409022 SPINK8P0C7L1 97 aa11.33□□□□□ -0.6
PTPN18-203ENST00000409022 ODF1Q14990 250 aa11.33□□□□□ -0.6
PTPN18-203ENST00000409022 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
PTPN18-203ENST00000409022 KRTAP10-8P60410 259 aa11.32□□□□□ -0.6
PTPN18-203ENST00000409022 TNXBP22105 4242 aa11.32□□□□□ -0.6
PTPN18-203ENST00000409022 IGLC3P0DOY3 106 aa11.31□□□□□ -0.6
PTPN18-203ENST00000409022 KRTAP7-1Q8IUC3 87 aa11.31□□□□□ -0.6
PTPN18-203ENST00000409022 C22orf24Q9Y442 160 aa11.31□□□□□ -0.6
PTPN18-203ENST00000409022 TP73-AS1Q9UF72 201 aa11.3□□□□□ -0.6
PTPN18-203ENST00000409022 H0Y9J4 135 aa11.29□□□□□ -0.6
PTPN18-203ENST00000409022 NUPR1O60356 82 aa11.29□□□□□ -0.6
PTPN18-203ENST00000409022 A0A096LNJ9 63 aa11.28□□□□□ -0.6
PTPN18-203ENST00000409022 KRTAP11-1Q8IUC1 163 aa11.28□□□□□ -0.6
PTPN18-203ENST00000409022 URB1-AS1Q96HZ7 61 aa11.28□□□□□ -0.6
PTPN18-203ENST00000409022 SFTA2Q6UW10 78 aa11.27□□□□□ -0.61
PTPN18-203ENST00000409022 MRPL55Q7Z7F7 128 aaKnown RBP11.27□□□□□ -0.61
PTPN18-203ENST00000409022 PMCHL1Q16048 86 aa11.26□□□□□ -0.61
PTPN18-203ENST00000409022 BAGE3Q86Y29 109 aa11.26□□□□□ -0.61
PTPN18-203ENST00000409022 CHCHD1Q96BP2 118 aaKnown RBP11.26□□□□□ -0.61
PTPN18-203ENST00000409022 IGLV5-39A0A0G2JS06 123 aa11.25□□□□□ -0.61
PTPN18-203ENST00000409022 ZNF22P17026 224 aaPredicted RBP11.25□□□□□ -0.61
PTPN18-203ENST00000409022 TMEM170BQ5T4T1 132 aa11.23□□□□□ -0.61
PTPN18-203ENST00000409022 NKAPP1Q8N9T2 125 aa11.23□□□□□ -0.61
PTPN18-203ENST00000409022 IGLV1-50A0A075B6I6 118 aa11.22□□□□□ -0.61
PTPN18-203ENST00000409022 ZNF861PO60384 105 aa11.22□□□□□ -0.61
PTPN18-203ENST00000409022 CHTOPQ9Y3Y2 248 aaKnown RBP11.22□□□□□ -0.61
PTPN18-203ENST00000409022 COX17Q14061 63 aa11.21□□□□□ -0.61
PTPN18-203ENST00000409022 YPEL4Q96NS1 127 aa11.21□□□□□ -0.61
PTPN18-203ENST00000409022 C11orf86A6NJI1 115 aa11.2□□□□□ -0.62
PTPN18-203ENST00000409022 PFN2P35080 140 aa11.2□□□□□ -0.62
PTPN18-203ENST00000409022 RPL28P46779 137 aaKnown RBP11.2□□□□□ -0.62
PTPN18-203ENST00000409022 UBR4Q5T4S7 5183 aa11.2□□□□□ -0.62
PTPN18-203ENST00000409022 IGLV5-37A0A075B6J1 123 aa11.19□□□□□ -0.62
PTPN18-203ENST00000409022 HSBP1O75506 76 aa11.19□□□□□ -0.62
PTPN18-203ENST00000409022 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
PTPN18-203ENST00000409022 PRR26Q8N8Z3 221 aa11.19□□□□□ -0.62
PTPN18-203ENST00000409022 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
PTPN18-203ENST00000409022 TRAV12-1A0A0B4J245 112 aa11.18□□□□□ -0.62
PTPN18-203ENST00000409022 BCE1O60756 84 aa11.18□□□□□ -0.62
PTPN18-203ENST00000409022 IFI27L1Q96BM0 104 aa11.18□□□□□ -0.62
PTPN18-203ENST00000409022 LINC00167Q96N53 147 aa11.18□□□□□ -0.62
PTPN18-203ENST00000409022 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
PTPN18-203ENST00000409022 CBLN2Q8IUK8 224 aa11.17□□□□□ -0.62
PTPN18-203ENST00000409022 GAGE10A6NGK3 116 aa11.16□□□□□ -0.62
PTPN18-203ENST00000409022 RPL37AP8A6NKH3 93 aa11.16□□□□□ -0.62
PTPN18-203ENST00000409022 ZNF625Q96I27 306 aaPredicted RBP11.14□□□□□ -0.63
PTPN18-203ENST00000409022 SND1-IT1Q9HBX3 110 aa11.14□□□□□ -0.63
PTPN18-203ENST00000409022 KRTAP1-4P0C5Y4 121 aa11.13□□□□□ -0.63
PTPN18-203ENST00000409022 TMEM223A0PJW6 202 aa11.12□□□□□ -0.63
PTPN18-203ENST00000409022 TRGC2P03986 189 aa11.12□□□□□ -0.63
PTPN18-203ENST00000409022 UBE2AP49459 152 aa11.12□□□□□ -0.63
PTPN18-203ENST00000409022 LINC00158P58513 81 aa11.11□□□□□ -0.63
PTPN18-203ENST00000409022 IGKV2-28A0A075B6P5 120 aa11.09□□□□□ -0.63
PTPN18-203ENST00000409022 LINC00587B1AMM8 73 aa11.09□□□□□ -0.63
PTPN18-203ENST00000409022 LEPROTL1O95214 131 aa11.09□□□□□ -0.63
PTPN18-203ENST00000409022 IGKV2D-28P01615 120 aa11.09□□□□□ -0.63
PTPN18-203ENST00000409022 FAM19A2Q8N3H0 131 aa11.09□□□□□ -0.63
PTPN18-203ENST00000409022 VPREB1P12018 145 aa11.08□□□□□ -0.64
PTPN18-203ENST00000409022 HERV-K104P63124 156 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms