RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 ALKBH7Q9BT30 221 aaPredicted RBP13.61□□□□□ -0.23
KDELR3-202ENST00000409006 H0Y9J4 135 aa13.6□□□□□ -0.23
KDELR3-202ENST00000409006 TRAV9-1A0A075B6T8 112 aa13.59□□□□□ -0.23
KDELR3-202ENST00000409006 PAPPA-AS1Q5QFB9 102 aa13.59□□□□□ -0.23
KDELR3-202ENST00000409006 GEMIN7Q9H840 131 aaKnown RBP13.59□□□□□ -0.23
KDELR3-202ENST00000409006 G0S2P27469 103 aa13.58□□□□□ -0.24
KDELR3-202ENST00000409006 SEC11AP67812 179 aa13.58□□□□□ -0.24
KDELR3-202ENST00000409006 ERASQ7Z444 233 aa13.58□□□□□ -0.24
KDELR3-202ENST00000409006 SCGB3A1Q96QR1 104 aa13.58□□□□□ -0.24
KDELR3-202ENST00000409006 XAGE1AQ9HD64 81 aa13.58□□□□□ -0.24
KDELR3-202ENST00000409006 LINC01546A6NGU7 62 aa13.56□□□□□ -0.24
KDELR3-202ENST00000409006 KRTAP1-4P0C5Y4 121 aa13.56□□□□□ -0.24
KDELR3-202ENST00000409006 SEC11CQ9BY50 192 aa13.56□□□□□ -0.24
KDELR3-202ENST00000409006 GNB1LQ9BYB4 327 aa13.56□□□□□ -0.24
KDELR3-202ENST00000409006 SMIM1B2RUZ4 78 aa13.54□□□□□ -0.24
KDELR3-202ENST00000409006 F8VRH5 84 aa13.54□□□□□ -0.24
KDELR3-202ENST00000409006 C22orf24Q9Y442 160 aa13.54□□□□□ -0.24
KDELR3-202ENST00000409006 TINCRA0A1B0GVN0 87 aa13.52□□□□□ -0.25
KDELR3-202ENST00000409006 S100PP25815 95 aa13.52□□□□□ -0.25
KDELR3-202ENST00000409006 LPAP08519 4548 aa13.51□□□□□ -0.25
KDELR3-202ENST00000409006 IGLV5-45A0A087WSX0 123 aa13.51□□□□□ -0.25
KDELR3-202ENST00000409006 CST9LQ9H4G1 147 aa13.51□□□□□ -0.25
KDELR3-202ENST00000409006 COMMD7Q86VX2 200 aa13.5□□□□□ -0.25
KDELR3-202ENST00000409006 MRPL18Q9H0U6 180 aaKnown RBP13.5□□□□□ -0.25
KDELR3-202ENST00000409006 CXCL5P42830 114 aa13.49□□□□□ -0.25
KDELR3-202ENST00000409006 PDZD11Q5EBL8 140 aa13.49□□□□□ -0.25
KDELR3-202ENST00000409006 COX7B2Q8TF08 81 aa13.49□□□□□ -0.25
KDELR3-202ENST00000409006 C10orf91Q5T1B1 145 aa13.48□□□□□ -0.25
KDELR3-202ENST00000409006 IGLV1-50A0A075B6I6 118 aa13.47□□□□□ -0.25
KDELR3-202ENST00000409006 SPINK8P0C7L1 97 aa13.47□□□□□ -0.25
KDELR3-202ENST00000409006 FABP9Q0Z7S8 132 aa13.47□□□□□ -0.25
KDELR3-202ENST00000409006 ZNF861PO60384 105 aa13.46□□□□□ -0.25
KDELR3-202ENST00000409006 PMVKQ15126 192 aa13.46□□□□□ -0.25
KDELR3-202ENST00000409006 FA2HQ7L5A8 372 aa13.46□□□□□ -0.25
KDELR3-202ENST00000409006 RNF213Q63HN8 5207 aa13.45□□□□□ -0.26
KDELR3-202ENST00000409006 COX19Q49B96 90 aa13.45□□□□□ -0.26
KDELR3-202ENST00000409006 LBHQ53QV2 105 aaPredicted RBP13.45□□□□□ -0.26
KDELR3-202ENST00000409006 RPS10P5Q9NQ39 176 aa13.45□□□□□ -0.26
KDELR3-202ENST00000409006 LINC01549A6NIU2 74 aa13.44□□□□□ -0.26
KDELR3-202ENST00000409006 NUPR1O60356 82 aa13.44□□□□□ -0.26
KDELR3-202ENST00000409006 MRPL55Q7Z7F7 128 aaKnown RBP13.44□□□□□ -0.26
KDELR3-202ENST00000409006 SMCO4Q9NRQ5 59 aa13.44□□□□□ -0.26
KDELR3-202ENST00000409006 TP73-AS1Q9UF72 201 aa13.44□□□□□ -0.26
KDELR3-202ENST00000409006 A0A096LNJ9 63 aa13.43□□□□□ -0.26
KDELR3-202ENST00000409006 RAB5BP61020 215 aa13.43□□□□□ -0.26
KDELR3-202ENST00000409006 URB1-AS1Q96HZ7 61 aa13.43□□□□□ -0.26
KDELR3-202ENST00000409006 CARHSP1Q9Y2V2 147 aaKnown RBP13.43□□□□□ -0.26
KDELR3-202ENST00000409006 RHEBQ15382 184 aa13.41□□□□□ -0.26
KDELR3-202ENST00000409006 LINC00167Q96N53 147 aa13.41□□□□□ -0.26
KDELR3-202ENST00000409006 RPL37AP8A6NKH3 93 aa13.4□□□□□ -0.26
KDELR3-202ENST00000409006 GAGE10A6NGK3 116 aa13.38□□□□□ -0.27
KDELR3-202ENST00000409006 IGLC3P0DOY3 106 aa13.38□□□□□ -0.27
KDELR3-202ENST00000409006 C18orf32Q8TCD1 76 aa13.38□□□□□ -0.27
KDELR3-202ENST00000409006 BCE1O60756 84 aa13.37□□□□□ -0.27
KDELR3-202ENST00000409006 NDUFA6P56556 154 aa13.36□□□□□ -0.27
KDELR3-202ENST00000409006 PMCHL1Q16048 86 aa13.36□□□□□ -0.27
KDELR3-202ENST00000409006 TRAPPC1Q9Y5R8 145 aa13.36□□□□□ -0.27
KDELR3-202ENST00000409006 IGLV5-39A0A0G2JS06 123 aa13.35□□□□□ -0.27
KDELR3-202ENST00000409006 H3BRM9 83 aa13.35□□□□□ -0.27
KDELR3-202ENST00000409006 LINC00614P0C842 121 aa13.35□□□□□ -0.27
KDELR3-202ENST00000409006 ZNF22P17026 224 aaPredicted RBP13.35□□□□□ -0.27
KDELR3-202ENST00000409006 RPL13AP40429 203 aaKnown RBP13.35□□□□□ -0.27
KDELR3-202ENST00000409006 IGLV5-37A0A075B6J1 123 aa13.34□□□□□ -0.27
KDELR3-202ENST00000409006 SCO1O75880 301 aa13.34□□□□□ -0.27
KDELR3-202ENST00000409006 ATP5LO75964 103 aa13.33□□□□□ -0.28
KDELR3-202ENST00000409006 RPL28P46779 137 aaKnown RBP13.33□□□□□ -0.28
KDELR3-202ENST00000409006 A0A087X002 238 aa13.32□□□□□ -0.28
KDELR3-202ENST00000409006 HBDP02042 147 aa13.32□□□□□ -0.28
KDELR3-202ENST00000409006 PFN2P35080 140 aa13.32□□□□□ -0.28
KDELR3-202ENST00000409006 NKAPP1Q8N9T2 125 aa13.3□□□□□ -0.28
KDELR3-202ENST00000409006 KRTAP13-1Q8IUC0 172 aa13.29□□□□□ -0.28
KDELR3-202ENST00000409006 C11orf86A6NJI1 115 aa13.28□□□□□ -0.28
KDELR3-202ENST00000409006 APOC3P02656 99 aa13.28□□□□□ -0.28
KDELR3-202ENST00000409006 ANAPC11Q9NYG5 84 aa13.28□□□□□ -0.28
KDELR3-202ENST00000409006 IGKV2-28A0A075B6P5 120 aa13.27□□□□□ -0.29
KDELR3-202ENST00000409006 IGKV2D-28P01615 120 aa13.27□□□□□ -0.29
KDELR3-202ENST00000409006 BAGE3Q86Y29 109 aa13.27□□□□□ -0.29
KDELR3-202ENST00000409006 ZNF625Q96I27 306 aaPredicted RBP13.27□□□□□ -0.29
KDELR3-202ENST00000409006 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.29
KDELR3-202ENST00000409006 ERG28Q9UKR5 140 aa13.27□□□□□ -0.29
KDELR3-202ENST00000409006 PRR4Q16378 134 aa13.26□□□□□ -0.29
KDELR3-202ENST00000409006 TSPAN13O95857 204 aa13.25□□□□□ -0.29
KDELR3-202ENST00000409006 VPREB1P12018 145 aa13.25□□□□□ -0.29
KDELR3-202ENST00000409006 Q8NDZ9 215 aa13.25□□□□□ -0.29
KDELR3-202ENST00000409006 CRYGAP11844 174 aa13.23□□□□□ -0.29
KDELR3-202ENST00000409006 UBE2AP49459 152 aa13.23□□□□□ -0.29
KDELR3-202ENST00000409006 TMEM170BQ5T4T1 132 aa13.23□□□□□ -0.29
KDELR3-202ENST00000409006 SNAPINO95295 136 aa13.21□□□□□ -0.29
KDELR3-202ENST00000409006 COX17Q14061 63 aa13.21□□□□□ -0.29
KDELR3-202ENST00000409006 KRTAP13-2Q52LG2 175 aa13.21□□□□□ -0.29
KDELR3-202ENST00000409006 TYMSOSQ8TAI1 123 aa13.21□□□□□ -0.29
KDELR3-202ENST00000409006 YPEL4Q96NS1 127 aa13.21□□□□□ -0.29
KDELR3-202ENST00000409006 TMEM238C9JI98 176 aa13.2□□□□□ -0.3
KDELR3-202ENST00000409006 PRLHP81277 87 aa13.2□□□□□ -0.3
KDELR3-202ENST00000409006 SVBPQ8N300 66 aa13.2□□□□□ -0.3
KDELR3-202ENST00000409006 CHTOPQ9Y3Y2 248 aaKnown RBP13.2□□□□□ -0.3
KDELR3-202ENST00000409006 TMEM126AQ9H061 195 aa13.18□□□□□ -0.3
KDELR3-202ENST00000409006 M0R378 163 aa13.16□□□□□ -0.3
KDELR3-202ENST00000409006 RPL24P83731 157 aaKnown RBP13.16□□□□□ -0.3
KDELR3-202ENST00000409006 NDUFA5Q16718 116 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms