RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ODF1Q14990 250 aa5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 NDUFA5Q16718 116 aa5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 KIAA1644Q3SXP7 199 aa5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 C2orf82Q6UX34 121 aa5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 PHF5AQ7RTV0 110 aaKnown RBP5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 FAM19A5Q7Z5A7 132 aaPredicted RBP5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 LINC00469Q8N7U9 141 aa5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 TINCRA0A1B0GVN0 87 aa5.6□□□□□ -1.51
SNORD88A-201ENST00000408314 IFITM2Q01629 132 aa5.6□□□□□ -1.51
SNORD88A-201ENST00000408314 FABP9Q0Z7S8 132 aa5.6□□□□□ -1.51
SNORD88A-201ENST00000408314 RPS10P5Q9NQ39 176 aa5.6□□□□□ -1.51
SNORD88A-201ENST00000408314 CDKN2A-AS1Q9UH64 79 aa5.6□□□□□ -1.51
SNORD88A-201ENST00000408314 CARHSP1Q9Y2V2 147 aaKnown RBP5.6□□□□□ -1.51
SNORD88A-201ENST00000408314 LINC01546A6NGU7 62 aa5.59□□□□□ -1.51
SNORD88A-201ENST00000408314 H3BRM9 83 aa5.59□□□□□ -1.51
SNORD88A-201ENST00000408314 IGLV7-43P04211 117 aa5.59□□□□□ -1.51
SNORD88A-201ENST00000408314 PMVKQ15126 192 aa5.59□□□□□ -1.51
SNORD88A-201ENST00000408314 LBHQ53QV2 105 aaPredicted RBP5.59□□□□□ -1.51
SNORD88A-201ENST00000408314 PDZD11Q5EBL8 140 aa5.59□□□□□ -1.51
SNORD88A-201ENST00000408314 C10orf91Q5T1B1 145 aa5.59□□□□□ -1.51
SNORD88A-201ENST00000408314 ZC2HC1BQ5TFG8 222 aa5.59□□□□□ -1.51
SNORD88A-201ENST00000408314 MRPL18Q9H0U6 180 aaKnown RBP5.59□□□□□ -1.51
SNORD88A-201ENST00000408314 IGLV5-45A0A087WSX0 123 aa5.57□□□□□ -1.52
SNORD88A-201ENST00000408314 FAM168BA1KXE4 195 aa5.57□□□□□ -1.52
SNORD88A-201ENST00000408314 NUPR1O60356 82 aa5.57□□□□□ -1.52
SNORD88A-201ENST00000408314 SNAPINO95295 136 aa5.57□□□□□ -1.52
SNORD88A-201ENST00000408314 RAB5BP61020 215 aa5.57□□□□□ -1.52
SNORD88A-201ENST00000408314 COX7B2Q8TF08 81 aa5.57□□□□□ -1.52
SNORD88A-201ENST00000408314 SMIM1B2RUZ4 78 aa5.56□□□□□ -1.52
SNORD88A-201ENST00000408314 H0Y9J4 135 aa5.56□□□□□ -1.52
SNORD88A-201ENST00000408314 C9orf129Q5T035 196 aaKnown RBP5.56□□□□□ -1.52
SNORD88A-201ENST00000408314 SFTA2Q6UW10 78 aa5.56□□□□□ -1.52
SNORD88A-201ENST00000408314 SVBPQ8N300 66 aa5.56□□□□□ -1.52
SNORD88A-201ENST00000408314 CST9LQ9H4G1 147 aa5.56□□□□□ -1.52
SNORD88A-201ENST00000408314 TP73-AS1Q9UF72 201 aa5.56□□□□□ -1.52
SNORD88A-201ENST00000408314 TRAPPC1Q9Y5R8 145 aa5.56□□□□□ -1.52
SNORD88A-201ENST00000408314 IGLV1-50A0A075B6I6 118 aa5.55□□□□□ -1.52
SNORD88A-201ENST00000408314 ATP5LO75964 103 aa5.55□□□□□ -1.52
SNORD88A-201ENST00000408314 HBDP02042 147 aa5.55□□□□□ -1.52
SNORD88A-201ENST00000408314 KRTAP10-8P60410 259 aa5.55□□□□□ -1.52
SNORD88A-201ENST00000408314 TNXBP22105 4242 aa5.55□□□□□ -1.52
SNORD88A-201ENST00000408314 APOC3P02656 99 aa5.54□□□□□ -1.52
SNORD88A-201ENST00000408314 LINC00614P0C842 121 aa5.54□□□□□ -1.52
SNORD88A-201ENST00000408314 RPL13AP40429 203 aaKnown RBP5.54□□□□□ -1.52
SNORD88A-201ENST00000408314 XAGE1AQ9HD64 81 aa5.54□□□□□ -1.52
SNORD88A-201ENST00000408314 SPINK8P0C7L1 97 aa5.53□□□□□ -1.52
SNORD88A-201ENST00000408314 IGLC3P0DOY3 106 aa5.53□□□□□ -1.52
SNORD88A-201ENST00000408314 NDUFA6P56556 154 aa5.53□□□□□ -1.52
SNORD88A-201ENST00000408314 MRPL55Q7Z7F7 128 aaKnown RBP5.53□□□□□ -1.52
SNORD88A-201ENST00000408314 C18orf32Q8TCD1 76 aa5.53□□□□□ -1.52
SNORD88A-201ENST00000408314 C22orf24Q9Y442 160 aa5.53□□□□□ -1.52
SNORD88A-201ENST00000408314 UBR4Q5T4S7 5183 aa5.52□□□□□ -1.53
SNORD88A-201ENST00000408314 RPL28P46779 137 aaKnown RBP5.52□□□□□ -1.53
SNORD88A-201ENST00000408314 KRTAP7-1Q8IUC3 87 aa5.52□□□□□ -1.53
SNORD88A-201ENST00000408314 NKAPP1Q8N9T2 125 aa5.52□□□□□ -1.53
SNORD88A-201ENST00000408314 ZNF861PO60384 105 aa5.51□□□□□ -1.53
SNORD88A-201ENST00000408314 IGLV5-37A0A075B6J1 123 aa5.5□□□□□ -1.53
SNORD88A-201ENST00000408314 IGLV5-39A0A0G2JS06 123 aa5.5□□□□□ -1.53
SNORD88A-201ENST00000408314 BCE1O60756 84 aa5.5□□□□□ -1.53
SNORD88A-201ENST00000408314 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
SNORD88A-201ENST00000408314 COX17Q14061 63 aa5.5□□□□□ -1.53
SNORD88A-201ENST00000408314 KRTAP11-1Q8IUC1 163 aa5.5□□□□□ -1.53
SNORD88A-201ENST00000408314 CHCHD1Q96BP2 118 aaKnown RBP5.5□□□□□ -1.53
SNORD88A-201ENST00000408314 A0A096LNJ9 63 aa5.49□□□□□ -1.53
SNORD88A-201ENST00000408314 RPL24P83731 157 aaKnown RBP5.49□□□□□ -1.53
SNORD88A-201ENST00000408314 TMEM170BQ5T4T1 132 aa5.49□□□□□ -1.53
SNORD88A-201ENST00000408314 BAGE3Q86Y29 109 aa5.49□□□□□ -1.53
SNORD88A-201ENST00000408314 PRR26Q8N8Z3 221 aa5.49□□□□□ -1.53
SNORD88A-201ENST00000408314 ERG28Q9UKR5 140 aa5.48□□□□□ -1.53
SNORD88A-201ENST00000408314 CHTOPQ9Y3Y2 248 aaKnown RBP5.48□□□□□ -1.53
SNORD88A-201ENST00000408314 TRAV12-1A0A0B4J245 112 aa5.47□□□□□ -1.53
SNORD88A-201ENST00000408314 HSBP1O75506 76 aa5.47□□□□□ -1.53
SNORD88A-201ENST00000408314 KRTAP1-4P0C5Y4 121 aa5.47□□□□□ -1.53
SNORD88A-201ENST00000408314 PFN2P35080 140 aa5.47□□□□□ -1.53
SNORD88A-201ENST00000408314 UBE2AP49459 152 aa5.47□□□□□ -1.53
SNORD88A-201ENST00000408314 URB1-AS1Q96HZ7 61 aa5.47□□□□□ -1.53
SNORD88A-201ENST00000408314 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
SNORD88A-201ENST00000408314 LRP2P98164 4655 aa5.47□□□□□ -1.53
SNORD88A-201ENST00000408314 C11orf86A6NJI1 115 aa5.46□□□□□ -1.54
SNORD88A-201ENST00000408314 PMCHL1Q16048 86 aa5.46□□□□□ -1.54
SNORD88A-201ENST00000408314 IFI27L1Q96BM0 104 aa5.46□□□□□ -1.54
SNORD88A-201ENST00000408314 GAGE10A6NGK3 116 aa5.45□□□□□ -1.54
SNORD88A-201ENST00000408314 RPL37AP8A6NKH3 93 aa5.45□□□□□ -1.54
SNORD88A-201ENST00000408314 LINC00587B1AMM8 73 aa5.45□□□□□ -1.54
SNORD88A-201ENST00000408314 ATP6V1G1O75348 118 aa5.45□□□□□ -1.54
SNORD88A-201ENST00000408314 CRYGAP11844 174 aa5.45□□□□□ -1.54
SNORD88A-201ENST00000408314 SND1-IT1Q9HBX3 110 aa5.45□□□□□ -1.54
SNORD88A-201ENST00000408314 IGKV2-28A0A075B6P5 120 aa5.43□□□□□ -1.54
SNORD88A-201ENST00000408314 IGKV2D-28P01615 120 aa5.43□□□□□ -1.54
SNORD88A-201ENST00000408314 VPREB1P12018 145 aa5.43□□□□□ -1.54
SNORD88A-201ENST00000408314 LINC00158P58513 81 aa5.43□□□□□ -1.54
SNORD88A-201ENST00000408314 HERV-K104P63124 156 aa5.43□□□□□ -1.54
SNORD88A-201ENST00000408314 ZNF625Q96I27 306 aaPredicted RBP5.43□□□□□ -1.54
SNORD88A-201ENST00000408314 YPEL4Q96NS1 127 aa5.43□□□□□ -1.54
SNORD88A-201ENST00000408314 MAP1LC3CQ9BXW4 147 aa5.43□□□□□ -1.54
SNORD88A-201ENST00000408314 TMEM223A0PJW6 202 aa5.42□□□□□ -1.54
SNORD88A-201ENST00000408314 S100A12P80511 92 aa5.42□□□□□ -1.54
SNORD88A-201ENST00000408314 FAM229BQ4G0N7 80 aa5.42□□□□□ -1.54
SNORD88A-201ENST00000408314 MEIG1Q5JSS6 88 aa5.42□□□□□ -1.54
SNORD88A-201ENST00000408314 MYMXA0A1B0GTQ4 84 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms