RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

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Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CSPG4Q6UVK1 2322 aa8.87□□□□□ -0.99
HERC3-203ENST00000407637 IGLV4-60A0A075B6I1 120 aa8.86□□□□□ -0.99
HERC3-203ENST00000407637 A0A087WZ39 114 aa8.86□□□□□ -0.99
HERC3-203ENST00000407637 A8MTW9 85 aa8.86□□□□□ -0.99
HERC3-203ENST00000407637 ZNF561-AS1K7EIQ3 104 aa8.86□□□□□ -0.99
HERC3-203ENST00000407637 FBXL19-AS1Q494R0 122 aa8.86□□□□□ -0.99
HERC3-203ENST00000407637 C6orf99Q4VX62 202 aa8.86□□□□□ -0.99
HERC3-203ENST00000407637 SPATA3Q8NHX4 192 aa8.86□□□□□ -0.99
HERC3-203ENST00000407637 C6orf226Q5I0X4 101 aa8.85□□□□□ -0.99
HERC3-203ENST00000407637 INSP01308 110 aa8.85□□□□□ -0.99
HERC3-203ENST00000407637 PMAIP1Q13794 54 aa8.84□□□□□ -0.99
HERC3-203ENST00000407637 C6orf223Q8N319 242 aa8.84□□□□□ -0.99
HERC3-203ENST00000407637 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
HERC3-203ENST00000407637 BPY2O14599 106 aa8.84□□□□□ -1
HERC3-203ENST00000407637 PRYO14603 147 aa8.84□□□□□ -1
HERC3-203ENST00000407637 FUSP35637 526 aaKnown RBP eCLIP8.84□□□□□ -1
HERC3-203ENST00000407637 PLAC8L1A1L4L8 177 aa8.83□□□□□ -1
HERC3-203ENST00000407637 BBC3Q96PG8 261 aaPredicted RBP8.83□□□□□ -1
HERC3-203ENST00000407637 CEP295Q9C0D2 2601 aa8.83□□□□□ -1
HERC3-203ENST00000407637 LINC00575Q6W349 94 aa8.83□□□□□ -1
HERC3-203ENST00000407637 PRR15Q8IV56 129 aa8.82□□□□□ -1
HERC3-203ENST00000407637 SPTBN4Q9H254 2564 aa8.82□□□□□ -1
HERC3-203ENST00000407637 UBE2E2Q96LR5 201 aa8.81□□□□□ -1
HERC3-203ENST00000407637 GNLYP22749 145 aa8.81□□□□□ -1
HERC3-203ENST00000407637 Q6ZTC4 211 aa8.81□□□□□ -1
HERC3-203ENST00000407637 MAP6D1Q9H9H5 199 aa8.81□□□□□ -1
HERC3-203ENST00000407637 Q8N9L7 120 aa8.8□□□□□ -1
HERC3-203ENST00000407637 Q8NDZ9 215 aa8.8□□□□□ -1
HERC3-203ENST00000407637 ERC2-IT1O76042 136 aa8.79□□□□□ -1
HERC3-203ENST00000407637 C11orf44Q8N8P7 122 aa8.79□□□□□ -1
HERC3-203ENST00000407637 MUC7Q8TAX7 377 aa8.79□□□□□ -1
HERC3-203ENST00000407637 NBPF19A0A087WUL8 3843 aa8.79□□□□□ -1
HERC3-203ENST00000407637 AKAP9Q99996 3911 aa8.79□□□□□ -1
HERC3-203ENST00000407637 DEFB136Q30KP8 78 aa8.79□□□□□ -1
HERC3-203ENST00000407637 C9orf66Q5T8R8 295 aa8.79□□□□□ -1
HERC3-203ENST00000407637 LRCOL1A6NCL2 159 aa8.78□□□□□ -1
HERC3-203ENST00000407637 SLURP1P55000 103 aa8.78□□□□□ -1
HERC3-203ENST00000407637 ADORA2A-AS1P86434 159 aa8.78□□□□□ -1
HERC3-203ENST00000407637 Q6ZQY7 126 aa8.78□□□□□ -1
HERC3-203ENST00000407637 LINC00959A0A1B0GUT2 108 aa8.77□□□□□ -1.01
HERC3-203ENST00000407637 Q6ZRU5 148 aa8.77□□□□□ -1.01
HERC3-203ENST00000407637 C1orf158Q8N1D5 194 aa8.77□□□□□ -1.01
HERC3-203ENST00000407637 HIGD2AQ9BW72 106 aa8.77□□□□□ -1.01
HERC3-203ENST00000407637 WNK1Q9H4A3 2382 aa8.77□□□□□ -1.01
HERC3-203ENST00000407637 KHDC1LQ5JSQ8 128 aa8.77□□□□□ -1.01
HERC3-203ENST00000407637 DYNLRB2Q8TF09 96 aa8.77□□□□□ -1.01
HERC3-203ENST00000407637 ATRXP46100 2492 aa8.76□□□□□ -1.01
HERC3-203ENST00000407637 A0A1W2PRX2 142 aa8.76□□□□□ -1.01
HERC3-203ENST00000407637 DAD1P61803 113 aa8.76□□□□□ -1.01
HERC3-203ENST00000407637 PDE6GP18545 87 aa8.76□□□□□ -1.01
HERC3-203ENST00000407637 CD164L2Q6UWJ8 174 aa8.76□□□□□ -1.01
HERC3-203ENST00000407637 Q8IZM0 81 aa8.76□□□□□ -1.01
HERC3-203ENST00000407637 C9orf116Q5BN46 136 aaPredicted RBP8.75□□□□□ -1.01
HERC3-203ENST00000407637 OCR1Q9BZK8 76 aa8.75□□□□□ -1.01
HERC3-203ENST00000407637 NOP10Q9NPE3 64 aaKnown RBP8.75□□□□□ -1.01
HERC3-203ENST00000407637 SPG11Q96JI7 2443 aa8.75□□□□□ -1.01
HERC3-203ENST00000407637 CLPSL2Q6UWE3 100 aa8.75□□□□□ -1.01
HERC3-203ENST00000407637 C18orf65Q6ZTR6 163 aa8.75□□□□□ -1.01
HERC3-203ENST00000407637 IGHV4-61A0A0C4DH41 118 aa8.74□□□□□ -1.01
HERC3-203ENST00000407637 TRBV6-8A0A0A6YYG3 113 aa8.74□□□□□ -1.01
HERC3-203ENST00000407637 Q6ZRP5 223 aa8.74□□□□□ -1.01
HERC3-203ENST00000407637 LINC01006Q8NI28 216 aa8.74□□□□□ -1.01
HERC3-203ENST00000407637 IGHV4-59P01825 116 aa8.73□□□□□ -1.01
HERC3-203ENST00000407637 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
HERC3-203ENST00000407637 HIVEP3Q5T1R4 2406 aa8.72□□□□□ -1.01
HERC3-203ENST00000407637 TRGV2A0A075B6R0 118 aa8.72□□□□□ -1.01
HERC3-203ENST00000407637 IGKV4-1P06312 121 aa8.72□□□□□ -1.01
HERC3-203ENST00000407637 JMJD1CQ15652 2540 aa8.72□□□□□ -1.01
HERC3-203ENST00000407637 PSPHP1O15172 72 aa8.71□□□□□ -1.01
HERC3-203ENST00000407637 ITPR1Q14643 2758 aa8.71□□□□□ -1.02
HERC3-203ENST00000407637 CR1P17927 2039 aa8.71□□□□□ -1.02
HERC3-203ENST00000407637 RETNQ9HD89 108 aa8.71□□□□□ -1.02
HERC3-203ENST00000407637 CHD8Q9HCK8 2581 aa8.71□□□□□ -1.02
HERC3-203ENST00000407637 CELSR2Q9HCU4 2923 aa8.71□□□□□ -1.02
HERC3-203ENST00000407637 IGF2RP11717 2491 aa8.7□□□□□ -1.02
HERC3-203ENST00000407637 TRGV4A0A0C4DH28 118 aa8.69□□□□□ -1.02
HERC3-203ENST00000407637 Q1T7F1 81 aa8.69□□□□□ -1.02
HERC3-203ENST00000407637 STHQ8IWL8 128 aa8.69□□□□□ -1.02
HERC3-203ENST00000407637 TLN2Q9Y4G6 2542 aa8.69□□□□□ -1.02
HERC3-203ENST00000407637 NCOR2Q9Y618 2525 aa8.69□□□□□ -1.02
HERC3-203ENST00000407637 LINC00269Q8N2A0 174 aa8.68□□□□□ -1.02
HERC3-203ENST00000407637 IGHV4-31P0DP07 118 aa8.68□□□□□ -1.02
HERC3-203ENST00000407637 ODF3L2Q3SX64 289 aa8.68□□□□□ -1.02
HERC3-203ENST00000407637 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.68□□□□□ -1.02
HERC3-203ENST00000407637 C1orf64Q8NEQ6 169 aa8.68□□□□□ -1.02
HERC3-203ENST00000407637 COX17Q14061 63 aa8.67□□□□□ -1.02
HERC3-203ENST00000407637 KIAA0087Q14695 138 aa8.67□□□□□ -1.02
HERC3-203ENST00000407637 CD164Q04900 197 aa8.67□□□□□ -1.02
HERC3-203ENST00000407637 LINC01356Q8N9X3 169 aa8.67□□□□□ -1.02
HERC3-203ENST00000407637 DEFB112Q30KQ8 113 aa8.67□□□□□ -1.02
HERC3-203ENST00000407637 CELA1Q9UNI1 258 aa8.67□□□□□ -1.02
HERC3-203ENST00000407637 PLA2G2AP14555 144 aa8.66□□□□□ -1.02
HERC3-203ENST00000407637 MYO9AB2RTY4 2548 aa8.66□□□□□ -1.02
HERC3-203ENST00000407637 LINC00612Q8N6U2 182 aa8.66□□□□□ -1.02
HERC3-203ENST00000407637 FAM30AQ9NZY2 134 aa8.66□□□□□ -1.02
HERC3-203ENST00000407637 PIEZO1Q92508 2521 aa8.66□□□□□ -1.02
HERC3-203ENST00000407637 CHD6Q8TD26 2715 aa8.65□□□□□ -1.02
HERC3-203ENST00000407637 TRAV22A0A0B4J277 110 aa8.65□□□□□ -1.03
HERC3-203ENST00000407637 A8MU10 97 aa8.65□□□□□ -1.03
HERC3-203ENST00000407637 IGLV6-57P01721 117 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms