RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CEND1Q8N111 149 aa14.1□□□□□ -0.15
TPM1-208ENST00000404484 ORAOV1Q8WV07 137 aa14.1□□□□□ -0.15
TPM1-208ENST00000404484 GCSHP23434 173 aa14.09□□□□□ -0.15
TPM1-208ENST00000404484 C6orf226Q5I0X4 101 aa14.09□□□□□ -0.15
TPM1-208ENST00000404484 COL5A1-AS1Q5SY13 56 aa14.09□□□□□ -0.15
TPM1-208ENST00000404484 TM2D2Q9BX73 214 aa14.09□□□□□ -0.15
TPM1-208ENST00000404484 RMI2Q96E14 147 aa14.09□□□□□ -0.15
TPM1-208ENST00000404484 CXCL5P42830 114 aa14.08□□□□□ -0.16
TPM1-208ENST00000404484 CFAP161Q6P656 301 aa14.08□□□□□ -0.16
TPM1-208ENST00000404484 Q6ZVH6 145 aa14.08□□□□□ -0.16
TPM1-208ENST00000404484 IGKV2D-24A0A075B6R9 120 aa14.06□□□□□ -0.16
TPM1-208ENST00000404484 A6NDN8 102 aa14.06□□□□□ -0.16
TPM1-208ENST00000404484 PTTG1IPP53801 180 aa14.06□□□□□ -0.16
TPM1-208ENST00000404484 KRTAP26-1Q6PEX3 210 aa14.05□□□□□ -0.16
TPM1-208ENST00000404484 TMEM238LA0A1B0GVL6 79 aa14.05□□□□□ -0.16
TPM1-208ENST00000404484 A6NJY4 79 aa14.05□□□□□ -0.16
TPM1-208ENST00000404484 CKS1BP61024 79 aa14.05□□□□□ -0.16
TPM1-208ENST00000404484 MEIG1Q5JSS6 88 aa14.05□□□□□ -0.16
TPM1-208ENST00000404484 SPANXDQ9BXN6 97 aa14.05□□□□□ -0.16
TPM1-208ENST00000404484 Q9HAA7 133 aa14.05□□□□□ -0.16
TPM1-208ENST00000404484 SPANXCQ9NY87 97 aa14.05□□□□□ -0.16
TPM1-208ENST00000404484 LITAFQ99732 161 aa14.04□□□□□ -0.16
TPM1-208ENST00000404484 SPAG11BQ08648 103 aa14.03□□□□□ -0.16
TPM1-208ENST00000404484 FXYD2P54710 66 aa14.02□□□□□ -0.16
TPM1-208ENST00000404484 KIAA0087Q14695 138 aa14.02□□□□□ -0.16
TPM1-208ENST00000404484 COPS9Q8WXC6 57 aa14.01□□□□□ -0.17
TPM1-208ENST00000404484 COX11Q9Y6N1 276 aa14.01□□□□□ -0.17
TPM1-208ENST00000404484 IFITM1P13164 125 aa14□□□□□ -0.17
TPM1-208ENST00000404484 RPL24P83731 157 aaKnown RBP13.99□□□□□ -0.17
TPM1-208ENST00000404484 TTC32Q5I0X7 151 aa13.99□□□□□ -0.17
TPM1-208ENST00000404484 DNAH6Q9C0G6 4158 aa13.98□□□□□ -0.17
TPM1-208ENST00000404484 ADAMTSL4-AS1Q5T5F5 129 aa13.98□□□□□ -0.17
TPM1-208ENST00000404484 SMIM13P0DJ93 91 aa13.96□□□□□ -0.17
TPM1-208ENST00000404484 ZNF561-AS1K7EIQ3 104 aa13.96□□□□□ -0.18
TPM1-208ENST00000404484 C2orf82Q6UX34 121 aa13.96□□□□□ -0.18
TPM1-208ENST00000404484 MUSTN1Q8IVN3 82 aa13.96□□□□□ -0.18
TPM1-208ENST00000404484 NHP2Q9NX24 153 aaKnown RBP13.96□□□□□ -0.18
TPM1-208ENST00000404484 ERG28Q9UKR5 140 aa13.96□□□□□ -0.18
TPM1-208ENST00000404484 F8WDY8 70 aa13.95□□□□□ -0.18
TPM1-208ENST00000404484 LINC00158P58513 81 aa13.94□□□□□ -0.18
TPM1-208ENST00000404484 COX17Q14061 63 aa13.94□□□□□ -0.18
TPM1-208ENST00000404484 PPDPFQ9H3Y8 114 aa13.94□□□□□ -0.18
TPM1-208ENST00000404484 C15orf56Q8N910 161 aa13.93□□□□□ -0.18
TPM1-208ENST00000404484 NTN5Q8WTR8 489 aaPredicted RBP13.93□□□□□ -0.18
TPM1-208ENST00000404484 GVQW2A0A096LPI5 108 aaPredicted RBP13.92□□□□□ -0.18
TPM1-208ENST00000404484 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.92□□□□□ -0.18
TPM1-208ENST00000404484 A0A0U1RRA0 63 aa13.92□□□□□ -0.18
TPM1-208ENST00000404484 A0A1B0GWB2 263 aa13.92□□□□□ -0.18
TPM1-208ENST00000404484 C2orf48Q96LS8 159 aa13.92□□□□□ -0.18
TPM1-208ENST00000404484 DAND5Q8N907 189 aa13.92□□□□□ -0.18
TPM1-208ENST00000404484 NBDYA0A0U1RRE5 68 aa13.91□□□□□ -0.18
TPM1-208ENST00000404484 A4D1N5 150 aa13.91□□□□□ -0.18
TPM1-208ENST00000404484 LINC00308Q8TCZ7 52 aa13.91□□□□□ -0.18
TPM1-208ENST00000404484 KRTAP1-5Q9BYS1 174 aa13.91□□□□□ -0.18
TPM1-208ENST00000404484 FRAS1Q86XX4 4008 aa13.9□□□□□ -0.18
TPM1-208ENST00000404484 TAX1BP3O14907 124 aa13.9□□□□□ -0.18
TPM1-208ENST00000404484 PFN2P35080 140 aa13.9□□□□□ -0.18
TPM1-208ENST00000404484 HIGD2BQ4VC39 106 aa13.9□□□□□ -0.18
TPM1-208ENST00000404484 C6orf223Q8N319 242 aa13.9□□□□□ -0.18
TPM1-208ENST00000404484 MIR7-3HGQ8N6C7 128 aa13.9□□□□□ -0.18
TPM1-208ENST00000404484 EPPK1P58107 5090 aaKnown RBP13.9□□□□□ -0.18
TPM1-208ENST00000404484 CAMK2N2Q96S95 79 aa13.89□□□□□ -0.19
TPM1-208ENST00000404484 UNQ6190/PRO20217Q6UXQ8 127 aa13.88□□□□□ -0.19
TPM1-208ENST00000404484 DNAH10Q8IVF4 4471 aa13.88□□□□□ -0.19
TPM1-208ENST00000404484 TRBV30A0A0K0K1B3 111 aa13.88□□□□□ -0.19
TPM1-208ENST00000404484 NPC2P61916 151 aa13.88□□□□□ -0.19
TPM1-208ENST00000404484 LINC00526Q96FQ7 95 aa13.88□□□□□ -0.19
TPM1-208ENST00000404484 K7ERJ3 54 aa13.87□□□□□ -0.19
TPM1-208ENST00000404484 A0A0B4J2C4 111 aa13.86□□□□□ -0.19
TPM1-208ENST00000404484 USP17L23D6RBM5 183 aa13.85□□□□□ -0.19
TPM1-208ENST00000404484 M0R2N4 97 aa13.85□□□□□ -0.19
TPM1-208ENST00000404484 PSCAO43653 123 aa13.85□□□□□ -0.19
TPM1-208ENST00000404484 CFC1BP0CG36 223 aa13.85□□□□□ -0.19
TPM1-208ENST00000404484 CFC1P0CG37 223 aa13.85□□□□□ -0.19
TPM1-208ENST00000404484 C10orf25Q5T742 122 aa13.85□□□□□ -0.19
TPM1-208ENST00000404484 RAB37Q96AX2 223 aa13.85□□□□□ -0.19
TPM1-208ENST00000404484 C9orf118A6NHY6 69 aa13.83□□□□□ -0.19
TPM1-208ENST00000404484 SOSTDC1Q6X4U4 206 aa13.83□□□□□ -0.19
TPM1-208ENST00000404484 A0A1B0GV90 55 aa13.83□□□□□ -0.2
TPM1-208ENST00000404484 C6orf48Q9UBA6 75 aa13.83□□□□□ -0.2
TPM1-208ENST00000404484 PRO1854Q9UHT4 67 aa13.83□□□□□ -0.2
TPM1-208ENST00000404484 SYCNQ0VAF6 134 aa13.82□□□□□ -0.2
TPM1-208ENST00000404484 DNAH2Q9P225 4427 aa13.82□□□□□ -0.2
TPM1-208ENST00000404484 C9orf116Q5BN46 136 aaPredicted RBP13.81□□□□□ -0.2
TPM1-208ENST00000404484 EIF4EBP3O60516 100 aaPredicted RBP13.8□□□□□ -0.2
TPM1-208ENST00000404484 Q6ZR54 194 aa13.8□□□□□ -0.2
TPM1-208ENST00000404484 Q6ZRU5 148 aa13.8□□□□□ -0.2
TPM1-208ENST00000404484 LOC107984156A0A0G2JMH3 177 aa13.79□□□□□ -0.2
TPM1-208ENST00000404484 ARL17AQ8IVW1 177 aa13.79□□□□□ -0.2
TPM1-208ENST00000404484 SND1-IT1Q9HBX3 110 aa13.79□□□□□ -0.2
TPM1-208ENST00000404484 RNF151Q2KHN1 245 aa13.79□□□□□ -0.2
TPM1-208ENST00000404484 C14orf177Q52M58 125 aa13.79□□□□□ -0.2
TPM1-208ENST00000404484 CARD19Q96LW7 228 aa13.78□□□□□ -0.2
TPM1-208ENST00000404484 PGPEP1Q9NXJ5 209 aa13.78□□□□□ -0.2
TPM1-208ENST00000404484 H3BUT2 72 aa13.77□□□□□ -0.21
TPM1-208ENST00000404484 LECT2O14960 151 aa13.75□□□□□ -0.21
TPM1-208ENST00000404484 NDUFC2-KCTD14E9PQ53 114 aa13.74□□□□□ -0.21
TPM1-208ENST00000404484 FAT2Q9NYQ8 4349 aa13.74□□□□□ -0.21
TPM1-208ENST00000404484 TRAV13-2A0A0B4J235 113 aa13.73□□□□□ -0.21
TPM1-208ENST00000404484 RTL8CO15255 209 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms