RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
TPM1-207ENST00000403994 SEC11CQ9BY50 192 aa9.34□□□□□ -0.91
TPM1-207ENST00000403994 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
TPM1-207ENST00000403994 H0Y9J4 135 aa9.33□□□□□ -0.92
TPM1-207ENST00000403994 UBE2BP63146 152 aa9.33□□□□□ -0.92
TPM1-207ENST00000403994 C6orf226Q5I0X4 101 aa9.33□□□□□ -0.92
TPM1-207ENST00000403994 ERASQ7Z444 233 aa9.33□□□□□ -0.92
TPM1-207ENST00000403994 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
TPM1-207ENST00000403994 GNB1LQ9BYB4 327 aa9.33□□□□□ -0.92
TPM1-207ENST00000403994 LINC01546A6NGU7 62 aa9.32□□□□□ -0.92
TPM1-207ENST00000403994 S100PP25815 95 aa9.32□□□□□ -0.92
TPM1-207ENST00000403994 LINC00469Q8N7U9 141 aa9.32□□□□□ -0.92
TPM1-207ENST00000403994 SCGB3A1Q96QR1 104 aa9.32□□□□□ -0.92
TPM1-207ENST00000403994 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
TPM1-207ENST00000403994 F8VRH5 84 aa9.31□□□□□ -0.92
TPM1-207ENST00000403994 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
TPM1-207ENST00000403994 COMMD7Q86VX2 200 aa9.31□□□□□ -0.92
TPM1-207ENST00000403994 XAGE1AQ9HD64 81 aa9.3□□□□□ -0.92
TPM1-207ENST00000403994 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
TPM1-207ENST00000403994 TINCRA0A1B0GVN0 87 aa9.29□□□□□ -0.92
TPM1-207ENST00000403994 CXCL5P42830 114 aa9.29□□□□□ -0.92
TPM1-207ENST00000403994 PRR26Q8N8Z3 221 aa9.29□□□□□ -0.92
TPM1-207ENST00000403994 LINC01549A6NIU2 74 aa9.28□□□□□ -0.92
TPM1-207ENST00000403994 COX19Q49B96 90 aa9.28□□□□□ -0.92
TPM1-207ENST00000403994 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
TPM1-207ENST00000403994 KRTAP1-4P0C5Y4 121 aa9.27□□□□□ -0.93
TPM1-207ENST00000403994 RHEBQ15382 184 aa9.27□□□□□ -0.93
TPM1-207ENST00000403994 PDZD11Q5EBL8 140 aa9.27□□□□□ -0.93
TPM1-207ENST00000403994 C10orf91Q5T1B1 145 aa9.27□□□□□ -0.93
TPM1-207ENST00000403994 FA2HQ7L5A8 372 aa9.27□□□□□ -0.93
TPM1-207ENST00000403994 CST9LQ9H4G1 147 aa9.27□□□□□ -0.93
TPM1-207ENST00000403994 COX7B2Q8TF08 81 aa9.26□□□□□ -0.93
TPM1-207ENST00000403994 CARHSP1Q9Y2V2 147 aaKnown RBP9.26□□□□□ -0.93
TPM1-207ENST00000403994 C22orf24Q9Y442 160 aa9.26□□□□□ -0.93
TPM1-207ENST00000403994 SPINK8P0C7L1 97 aa9.25□□□□□ -0.93
TPM1-207ENST00000403994 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
TPM1-207ENST00000403994 RPS10P5Q9NQ39 176 aa9.25□□□□□ -0.93
TPM1-207ENST00000403994 SMCO4Q9NRQ5 59 aa9.25□□□□□ -0.93
TPM1-207ENST00000403994 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
TPM1-207ENST00000403994 PMVKQ15126 192 aa9.24□□□□□ -0.93
TPM1-207ENST00000403994 TP73-AS1Q9UF72 201 aa9.24□□□□□ -0.93
TPM1-207ENST00000403994 LPAP08519 4548 aa9.23□□□□□ -0.93
TPM1-207ENST00000403994 NUPR1O60356 82 aa9.23□□□□□ -0.93
TPM1-207ENST00000403994 A0A096LNJ9 63 aa9.22□□□□□ -0.93
TPM1-207ENST00000403994 LBHQ53QV2 105 aaPredicted RBP9.22□□□□□ -0.93
TPM1-207ENST00000403994 MRPL55Q7Z7F7 128 aaKnown RBP9.22□□□□□ -0.93
TPM1-207ENST00000403994 ZNF861PO60384 105 aa9.21□□□□□ -0.94
TPM1-207ENST00000403994 H3BRM9 83 aa9.2□□□□□ -0.94
TPM1-207ENST00000403994 IGLC3P0DOY3 106 aa9.2□□□□□ -0.94
TPM1-207ENST00000403994 C18orf32Q8TCD1 76 aa9.2□□□□□ -0.94
TPM1-207ENST00000403994 URB1-AS1Q96HZ7 61 aa9.2□□□□□ -0.94
TPM1-207ENST00000403994 IGLV5-39A0A0G2JS06 123 aa9.18□□□□□ -0.94
TPM1-207ENST00000403994 RPL13AP40429 203 aaKnown RBP9.18□□□□□ -0.94
TPM1-207ENST00000403994 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
TPM1-207ENST00000403994 BCE1O60756 84 aa9.17□□□□□ -0.94
TPM1-207ENST00000403994 ATP5LO75964 103 aa9.17□□□□□ -0.94
TPM1-207ENST00000403994 HBDP02042 147 aa9.17□□□□□ -0.94
TPM1-207ENST00000403994 ZNF22P17026 224 aaPredicted RBP9.17□□□□□ -0.94
TPM1-207ENST00000403994 RAB5BP61020 215 aa9.17□□□□□ -0.94
TPM1-207ENST00000403994 PMCHL1Q16048 86 aa9.17□□□□□ -0.94
TPM1-207ENST00000403994 LINC00167Q96N53 147 aa9.17□□□□□ -0.94
TPM1-207ENST00000403994 TRAPPC1Q9Y5R8 145 aa9.17□□□□□ -0.94
TPM1-207ENST00000403994 GAGE10A6NGK3 116 aa9.16□□□□□ -0.94
TPM1-207ENST00000403994 RPL37AP8A6NKH3 93 aa9.16□□□□□ -0.94
TPM1-207ENST00000403994 NDUFA6P56556 154 aa9.16□□□□□ -0.94
TPM1-207ENST00000403994 LINC00614P0C842 121 aa9.15□□□□□ -0.94
TPM1-207ENST00000403994 RPL28P46779 137 aaKnown RBP9.15□□□□□ -0.94
TPM1-207ENST00000403994 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.94
TPM1-207ENST00000403994 APOC3P02656 99 aa9.14□□□□□ -0.95
TPM1-207ENST00000403994 PFN2P35080 140 aa9.13□□□□□ -0.95
TPM1-207ENST00000403994 C11orf86A6NJI1 115 aa9.12□□□□□ -0.95
TPM1-207ENST00000403994 SCO1O75880 301 aa9.12□□□□□ -0.95
TPM1-207ENST00000403994 SNAPINO95295 136 aa9.12□□□□□ -0.95
TPM1-207ENST00000403994 SVBPQ8N300 66 aa9.12□□□□□ -0.95
TPM1-207ENST00000403994 A0A087X002 238 aa9.11□□□□□ -0.95
TPM1-207ENST00000403994 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
TPM1-207ENST00000403994 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
TPM1-207ENST00000403994 ERG28Q9UKR5 140 aa9.11□□□□□ -0.95
TPM1-207ENST00000403994 IGKV2-28A0A075B6P5 120 aa9.1□□□□□ -0.95
TPM1-207ENST00000403994 IGKV2D-28P01615 120 aa9.1□□□□□ -0.95
TPM1-207ENST00000403994 BAGE3Q86Y29 109 aa9.1□□□□□ -0.95
TPM1-207ENST00000403994 SND1-IT1Q9HBX3 110 aa9.1□□□□□ -0.95
TPM1-207ENST00000403994 VPREB1P12018 145 aa9.09□□□□□ -0.95
TPM1-207ENST00000403994 TMEM170BQ5T4T1 132 aa9.09□□□□□ -0.95
TPM1-207ENST00000403994 YPEL4Q96NS1 127 aa9.09□□□□□ -0.95
TPM1-207ENST00000403994 UBE2AP49459 152 aa9.08□□□□□ -0.96
TPM1-207ENST00000403994 COX17Q14061 63 aa9.08□□□□□ -0.96
TPM1-207ENST00000403994 ZNF625Q96I27 306 aaPredicted RBP9.08□□□□□ -0.96
TPM1-207ENST00000403994 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
TPM1-207ENST00000403994 Q8NDZ9 215 aa9.07□□□□□ -0.96
TPM1-207ENST00000403994 CRYGAP11844 174 aa9.06□□□□□ -0.96
TPM1-207ENST00000403994 CHTOPQ9Y3Y2 248 aaKnown RBP9.06□□□□□ -0.96
TPM1-207ENST00000403994 PRR4Q16378 134 aa9.05□□□□□ -0.96
TPM1-207ENST00000403994 CHCHD1Q96BP2 118 aaKnown RBP9.05□□□□□ -0.96
TPM1-207ENST00000403994 ANAPC11Q9NYG5 84 aa9.05□□□□□ -0.96
TPM1-207ENST00000403994 TMEM238C9JI98 176 aa9.04□□□□□ -0.96
TPM1-207ENST00000403994 PRLHP81277 87 aa9.04□□□□□ -0.96
TPM1-207ENST00000403994 TYMSOSQ8TAI1 123 aa9.04□□□□□ -0.96
TPM1-207ENST00000403994 TMEM126AQ9H061 195 aa9.04□□□□□ -0.96
TPM1-207ENST00000403994 TRAV12-1A0A0B4J245 112 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms