RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 GAGE2DQ9UEU5 116 aa6.16□□□□□ -1.42
LINC01139-201ENST00000400946 FN1P02751 2386 aaKnown RBP6.16□□□□□ -1.42
LINC01139-201ENST00000400946 C2CD3Q4AC94 2353 aa6.15□□□□□ -1.42
LINC01139-201ENST00000400946 A0A0U1RRA0 63 aa6.15□□□□□ -1.42
LINC01139-201ENST00000400946 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.42
LINC01139-201ENST00000400946 CRLF1O75462 422 aa6.15□□□□□ -1.42
LINC01139-201ENST00000400946 SOSTDC1Q6X4U4 206 aa6.15□□□□□ -1.42
LINC01139-201ENST00000400946 C11orf44Q8N8P7 122 aa6.15□□□□□ -1.42
LINC01139-201ENST00000400946 IMUPQ9GZP8 106 aa6.15□□□□□ -1.42
LINC01139-201ENST00000400946 NSD1Q96L73 2696 aaPredicted RBP6.15□□□□□ -1.42
LINC01139-201ENST00000400946 NIPBLQ6KC79 2804 aaeCLIP6.15□□□□□ -1.42
LINC01139-201ENST00000400946 ANK3Q12955 4377 aaKnown RBP6.15□□□□□ -1.42
LINC01139-201ENST00000400946 H0YGX0 51 aa6.15□□□□□ -1.43
LINC01139-201ENST00000400946 CLEC2BQ92478 149 aa6.15□□□□□ -1.43
LINC01139-201ENST00000400946 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.43
LINC01139-201ENST00000400946 HIVEP2P31629 2446 aa6.14□□□□□ -1.43
LINC01139-201ENST00000400946 PAX4O43316 350 aa6.14□□□□□ -1.43
LINC01139-201ENST00000400946 CRPP02741 224 aa6.14□□□□□ -1.43
LINC01139-201ENST00000400946 INAFM2P0DMQ5 153 aa6.14□□□□□ -1.43
LINC01139-201ENST00000400946 NPC2P61916 151 aa6.14□□□□□ -1.43
LINC01139-201ENST00000400946 KRTAP5-3Q6L8H2 238 aa6.14□□□□□ -1.43
LINC01139-201ENST00000400946 DAND5Q8N907 189 aa6.14□□□□□ -1.43
LINC01139-201ENST00000400946 RPL35AP18077 110 aaKnown RBP6.13□□□□□ -1.43
LINC01139-201ENST00000400946 MUC7Q8TAX7 377 aa6.13□□□□□ -1.43
LINC01139-201ENST00000400946 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
LINC01139-201ENST00000400946 TLN2Q9Y4G6 2542 aa6.13□□□□□ -1.43
LINC01139-201ENST00000400946 TRBV7-7A0A0K0K1E9 115 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 LYRM9A8MSI8 78 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 GAGE6Q13070 117 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 SS18Q15532 418 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 TTC32Q5I0X7 151 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 C15orf53Q8NAA6 179 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 CHCHD5Q9BSY4 110 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 SND1-IT1Q9HBX3 110 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 PRO0255Q9UI72 69 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 SVEP1Q4LDE5 3571 aa6.12□□□□□ -1.43
LINC01139-201ENST00000400946 LINC00959A0A1B0GUT2 108 aa6.11□□□□□ -1.43
LINC01139-201ENST00000400946 MALP21145 153 aa6.11□□□□□ -1.43
LINC01139-201ENST00000400946 CXCL5P42830 114 aa6.11□□□□□ -1.43
LINC01139-201ENST00000400946 SDIM1Q6ZPB5 146 aa6.11□□□□□ -1.43
LINC01139-201ENST00000400946 Q8IZM0 81 aa6.11□□□□□ -1.43
LINC01139-201ENST00000400946 MIR7-3HGQ8N6C7 128 aa6.11□□□□□ -1.43
LINC01139-201ENST00000400946 LINC00482Q8N8I6 264 aa6.11□□□□□ -1.43
LINC01139-201ENST00000400946 ANAPC13Q9BS18 74 aa6.11□□□□□ -1.43
LINC01139-201ENST00000400946 CUBNO60494 3623 aa6.11□□□□□ -1.43
LINC01139-201ENST00000400946 A0A1B0GX51 115 aa6.1□□□□□ -1.43
LINC01139-201ENST00000400946 BAALC-AS2P0C853 105 aa6.1□□□□□ -1.43
LINC01139-201ENST00000400946 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
LINC01139-201ENST00000400946 IGLV4-60A0A075B6I1 120 aa6.09□□□□□ -1.43
LINC01139-201ENST00000400946 LOC100131303A0A0U1RQF7 123 aa6.09□□□□□ -1.43
LINC01139-201ENST00000400946 NDUFV3P56181 108 aaKnown RBP6.09□□□□□ -1.43
LINC01139-201ENST00000400946 COX17Q14061 63 aa6.09□□□□□ -1.43
LINC01139-201ENST00000400946 C9orf66Q5T8R8 295 aa6.09□□□□□ -1.43
LINC01139-201ENST00000400946 SONP18583 2426 aaKnown RBP6.09□□□□□ -1.43
LINC01139-201ENST00000400946 IGKV2-28A0A075B6P5 120 aa6.09□□□□□ -1.44
LINC01139-201ENST00000400946 IGKV2D-28P01615 120 aa6.09□□□□□ -1.44
LINC01139-201ENST00000400946 CCL18P55774 89 aa6.09□□□□□ -1.44
LINC01139-201ENST00000400946 LINC00158P58513 81 aa6.09□□□□□ -1.44
LINC01139-201ENST00000400946 NDUFC2O95298 119 aa6.08□□□□□ -1.44
LINC01139-201ENST00000400946 ATP5G1P05496 136 aa6.08□□□□□ -1.44
LINC01139-201ENST00000400946 GYPEP15421 78 aa6.08□□□□□ -1.44
LINC01139-201ENST00000400946 LINC00337Q8N6G1 96 aa6.08□□□□□ -1.44
LINC01139-201ENST00000400946 WFDC10AQ9H1F0 79 aa6.08□□□□□ -1.44
LINC01139-201ENST00000400946 TOMM7Q9P0U1 55 aa6.08□□□□□ -1.44
LINC01139-201ENST00000400946 X6R8D5 127 aa6.08□□□□□ -1.44
LINC01139-201ENST00000400946 IGHV4-28A0A0C4DH34 117 aa6.07□□□□□ -1.44
LINC01139-201ENST00000400946 DNAL4O96015 105 aa6.07□□□□□ -1.44
LINC01139-201ENST00000400946 APOC4P55056 127 aa6.07□□□□□ -1.44
LINC01139-201ENST00000400946 C6orf226Q5I0X4 101 aa6.07□□□□□ -1.44
LINC01139-201ENST00000400946 NHLRC4P0CG21 123 aaPredicted RBP6.06□□□□□ -1.44
LINC01139-201ENST00000400946 CD164L2Q6UWJ8 174 aa6.06□□□□□ -1.44
LINC01139-201ENST00000400946 SMIM11BQ8TCY0 68 aa6.06□□□□□ -1.44
LINC01139-201ENST00000400946 OBSCN-AS1Q96MR7 158 aa6.06□□□□□ -1.44
LINC01139-201ENST00000400946 DEFB130BP0DP73 79 aa6.05□□□□□ -1.44
LINC01139-201ENST00000400946 DEFB130AP0DP74 79 aa6.05□□□□□ -1.44
LINC01139-201ENST00000400946 JMJD1CQ15652 2540 aa6.05□□□□□ -1.44
LINC01139-201ENST00000400946 C5orf38Q86SI9 138 aa6.04□□□□□ -1.44
LINC01139-201ENST00000400946 FAM218AQ96MZ4 157 aa6.04□□□□□ -1.44
LINC01139-201ENST00000400946 LINC00167Q96N53 147 aa6.04□□□□□ -1.44
LINC01139-201ENST00000400946 C22orf24Q9Y442 160 aa6.04□□□□□ -1.44
LINC01139-201ENST00000400946 FBN1P35555 2871 aaKnown RBP6.04□□□□□ -1.44
LINC01139-201ENST00000400946 MIFP14174 115 aa6.04□□□□□ -1.44
LINC01139-201ENST00000400946 KRTAP10-3P60369 221 aa6.03□□□□□ -1.44
LINC01139-201ENST00000400946 TMEM126AQ9H061 195 aa6.03□□□□□ -1.44
LINC01139-201ENST00000400946 MXRA5Q9NR99 2828 aa6.03□□□□□ -1.44
LINC01139-201ENST00000400946 IGKV3OR2-268A0A0C4DH90 116 aa6.02□□□□□ -1.45
LINC01139-201ENST00000400946 JMJD7-PLA2G4BH0Y9G9 81 aa6.02□□□□□ -1.45
LINC01139-201ENST00000400946 H3BQ85 93 aa6.02□□□□□ -1.45
LINC01139-201ENST00000400946 KIAA0087Q14695 138 aa6.02□□□□□ -1.45
LINC01139-201ENST00000400946 KRTAP24-1Q3LI83 254 aa6.02□□□□□ -1.45
LINC01139-201ENST00000400946 KLK5Q9Y337 293 aaPredicted RBP6.02□□□□□ -1.45
LINC01139-201ENST00000400946 PFN2P35080 140 aa6.01□□□□□ -1.45
LINC01139-201ENST00000400946 XCL1P47992 114 aa6.01□□□□□ -1.45
LINC01139-201ENST00000400946 SPATA3Q8NHX4 192 aa6.01□□□□□ -1.45
LINC01139-201ENST00000400946 ORMDL1Q9P0S3 153 aa6.01□□□□□ -1.45
LINC01139-201ENST00000400946 DAD1P61803 113 aa6□□□□□ -1.45
LINC01139-201ENST00000400946 REG3AQ06141 175 aa6□□□□□ -1.45
LINC01139-201ENST00000400946 S100A7L2Q5SY68 101 aa6□□□□□ -1.45
LINC01139-201ENST00000400946 LELP1Q5T871 98 aa6□□□□□ -1.45
LINC01139-201ENST00000400946 MRAPQ8TCY5 172 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms