RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 C11orf71Q6IPW1 123 aa7.06□□□□□ -1.28
PTPRM-203ENST00000400060 CACNA1AO00555 2505 aa7.06□□□□□ -1.28
PTPRM-203ENST00000400060 IGLV10-54A0A075B6I4 117 aa7.06□□□□□ -1.28
PTPRM-203ENST00000400060 PRR4Q16378 134 aa7.05□□□□□ -1.28
PTPRM-203ENST00000400060 DEFB136Q30KP8 78 aa7.05□□□□□ -1.28
PTPRM-203ENST00000400060 LYPD5Q6UWN5 251 aa7.05□□□□□ -1.28
PTPRM-203ENST00000400060 IGKV2-28A0A075B6P5 120 aa7.05□□□□□ -1.28
PTPRM-203ENST00000400060 IGKV2D-28P01615 120 aa7.05□□□□□ -1.28
PTPRM-203ENST00000400060 PRRC2AP48634 2157 aaKnown RBP7.05□□□□□ -1.28
PTPRM-203ENST00000400060 Q6ZRU5 148 aa7.04□□□□□ -1.28
PTPRM-203ENST00000400060 Q8N9L7 120 aa7.03□□□□□ -1.28
PTPRM-203ENST00000400060 SERTAD4-AS1Q5TG53 156 aa7.03□□□□□ -1.28
PTPRM-203ENST00000400060 A0A1B0GUV1 79 aa7.03□□□□□ -1.28
PTPRM-203ENST00000400060 SMIM29Q86T20 159 aa7.03□□□□□ -1.28
PTPRM-203ENST00000400060 WFDC10BQ8IUB3 73 aa7.03□□□□□ -1.28
PTPRM-203ENST00000400060 CSPG4Q6UVK1 2322 aa7.03□□□□□ -1.28
PTPRM-203ENST00000400060 C11orf72Q8NBR9 251 aa7.02□□□□□ -1.29
PTPRM-203ENST00000400060 NAV3Q8IVL0 2385 aa7.02□□□□□ -1.29
PTPRM-203ENST00000400060 H0Y9P7 68 aa7.02□□□□□ -1.29
PTPRM-203ENST00000400060 DSCAMO60469 2012 aa7.01□□□□□ -1.29
PTPRM-203ENST00000400060 WDR87Q6ZQQ6 2873 aa7.01□□□□□ -1.29
PTPRM-203ENST00000400060 TRAV22A0A0B4J277 110 aa7.01□□□□□ -1.29
PTPRM-203ENST00000400060 A0A096LPF7 62 aa7.01□□□□□ -1.29
PTPRM-203ENST00000400060 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
PTPRM-203ENST00000400060 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
PTPRM-203ENST00000400060 H0Y9J4 135 aa7□□□□□ -1.29
PTPRM-203ENST00000400060 C1orf137Q5JT78 98 aa7□□□□□ -1.29
PTPRM-203ENST00000400060 PRM2P04554 102 aa7□□□□□ -1.29
PTPRM-203ENST00000400060 IGHV3OR16-9A0A0B4J2B5 98 aa7□□□□□ -1.29
PTPRM-203ENST00000400060 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
PTPRM-203ENST00000400060 TLN1Q9Y490 2541 aaKnown RBP7□□□□□ -1.29
PTPRM-203ENST00000400060 J3QKU1 62 aa7□□□□□ -1.29
PTPRM-203ENST00000400060 Q6ZSN1 163 aa6.99□□□□□ -1.29
PTPRM-203ENST00000400060 EGFEM1PQ0D2K5 195 aa6.99□□□□□ -1.29
PTPRM-203ENST00000400060 C4orf48Q5BLP8 95 aa6.99□□□□□ -1.29
PTPRM-203ENST00000400060 C19orf84I3L1E1 186 aa6.98□□□□□ -1.29
PTPRM-203ENST00000400060 OXTP01178 125 aa6.98□□□□□ -1.29
PTPRM-203ENST00000400060 IGKV4-1P06312 121 aa6.98□□□□□ -1.29
PTPRM-203ENST00000400060 CDSNQ15517 529 aa6.98□□□□□ -1.29
PTPRM-203ENST00000400060 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
PTPRM-203ENST00000400060 A8MUN3 132 aa6.98□□□□□ -1.29
PTPRM-203ENST00000400060 PCSK5Q92824 1860 aa6.98□□□□□ -1.29
PTPRM-203ENST00000400060 SPART-AS1P0CW21 52 aa6.97□□□□□ -1.29
PTPRM-203ENST00000400060 NANOS2P60321 138 aaKnown RBP6.97□□□□□ -1.29
PTPRM-203ENST00000400060 C8orf87E5RJ46 101 aa6.97□□□□□ -1.29
PTPRM-203ENST00000400060 KPRPQ5T749 579 aaPredicted RBP6.97□□□□□ -1.29
PTPRM-203ENST00000400060 KLK12Q9UKR0 248 aa6.96□□□□□ -1.29
PTPRM-203ENST00000400060 IGKV2D-24A0A075B6R9 120 aa6.96□□□□□ -1.3
PTPRM-203ENST00000400060 WNK1Q9H4A3 2382 aa6.96□□□□□ -1.3
PTPRM-203ENST00000400060 PIEZO2Q9H5I5 2752 aa6.96□□□□□ -1.3
PTPRM-203ENST00000400060 Q6YL49 198 aa6.95□□□□□ -1.3
PTPRM-203ENST00000400060 K7ERS5 55 aa6.95□□□□□ -1.3
PTPRM-203ENST00000400060 IGLV4-60A0A075B6I1 120 aa6.95□□□□□ -1.3
PTPRM-203ENST00000400060 CYSRT1A8MQ03 144 aa6.95□□□□□ -1.3
PTPRM-203ENST00000400060 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
PTPRM-203ENST00000400060 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
PTPRM-203ENST00000400060 IGF2RP11717 2491 aa6.94□□□□□ -1.3
PTPRM-203ENST00000400060 PRR3P79522 188 aaKnown RBP6.94□□□□□ -1.3
PTPRM-203ENST00000400060 XAGE1AQ9HD64 81 aa6.94□□□□□ -1.3
PTPRM-203ENST00000400060 RBM12B-AS1Q9P1G2 102 aa6.94□□□□□ -1.3
PTPRM-203ENST00000400060 LOC101927531A0A1B0GV80 90 aa6.94□□□□□ -1.3
PTPRM-203ENST00000400060 PIEZO1Q92508 2521 aa6.94□□□□□ -1.3
PTPRM-203ENST00000400060 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
PTPRM-203ENST00000400060 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
PTPRM-203ENST00000400060 CDC42SE1Q9NRR8 79 aa6.94□□□□□ -1.3
PTPRM-203ENST00000400060 LELP1Q5T871 98 aa6.93□□□□□ -1.3
PTPRM-203ENST00000400060 PSCAO43653 123 aa6.93□□□□□ -1.3
PTPRM-203ENST00000400060 IGHV4-31P0DP07 118 aa6.93□□□□□ -1.3
PTPRM-203ENST00000400060 CENPFP49454 3210 aa6.93□□□□□ -1.3
PTPRM-203ENST00000400060 NOTCH2Q04721 2471 aa6.93□□□□□ -1.3
PTPRM-203ENST00000400060 C9orf116Q5BN46 136 aaPredicted RBP6.92□□□□□ -1.3
PTPRM-203ENST00000400060 ZNF575Q86XF7 245 aa6.92□□□□□ -1.3
PTPRM-203ENST00000400060 ARHGAP32A7KAX9 2087 aa6.92□□□□□ -1.3
PTPRM-203ENST00000400060 NAV2Q8IVL1 2488 aa6.92□□□□□ -1.3
PTPRM-203ENST00000400060 RETNLBQ9BQ08 111 aa6.92□□□□□ -1.3
PTPRM-203ENST00000400060 NCOR2Q9Y618 2525 aa6.91□□□□□ -1.3
PTPRM-203ENST00000400060 HIVEP2P31629 2446 aa6.91□□□□□ -1.3
PTPRM-203ENST00000400060 BBC3Q96PG8 261 aaPredicted RBP6.91□□□□□ -1.3
PTPRM-203ENST00000400060 LOC100131303A0A0U1RQF7 123 aa6.91□□□□□ -1.3
PTPRM-203ENST00000400060 SYCNQ0VAF6 134 aa6.91□□□□□ -1.3
PTPRM-203ENST00000400060 UBE2DNLQ8IWF7 75 aa6.91□□□□□ -1.3
PTPRM-203ENST00000400060 PTPN13Q12923 2485 aa6.9□□□□□ -1.3
PTPRM-203ENST00000400060 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
PTPRM-203ENST00000400060 DNAJC9-AS1A6NH13 148 aa6.9□□□□□ -1.31
PTPRM-203ENST00000400060 IGLV6-57P01721 117 aa6.9□□□□□ -1.31
PTPRM-203ENST00000400060 SPAG11AQ6PDA7 123 aa6.9□□□□□ -1.31
PTPRM-203ENST00000400060 Q9BRP9 147 aa6.89□□□□□ -1.31
PTPRM-203ENST00000400060 Q8NBF4 154 aa6.89□□□□□ -1.31
PTPRM-203ENST00000400060 C2CD3Q4AC94 2353 aa6.89□□□□□ -1.31
PTPRM-203ENST00000400060 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
PTPRM-203ENST00000400060 PCNTO95613 3336 aa6.88□□□□□ -1.31
PTPRM-203ENST00000400060 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
PTPRM-203ENST00000400060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.88□□□□□ -1.31
PTPRM-203ENST00000400060 LINC01006Q8NI28 216 aa6.87□□□□□ -1.31
PTPRM-203ENST00000400060 Q9UF83 564 aa6.87□□□□□ -1.31
PTPRM-203ENST00000400060 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
PTPRM-203ENST00000400060 GVQW2A0A096LPI5 108 aaPredicted RBP6.87□□□□□ -1.31
PTPRM-203ENST00000400060 C10orf99Q6UWK7 81 aa6.87□□□□□ -1.31
PTPRM-203ENST00000400060 ZNF702PQ9H963 129 aa6.87□□□□□ -1.31
PTPRM-203ENST00000400060 Q75L30 129 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 1005.3 ms