RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 CMC4P56277 68 aaPredicted RBP6.65□□□□□ -1.34
COL28A1-201ENST00000399429 A0A087WZ39 114 aa6.65□□□□□ -1.35
COL28A1-201ENST00000399429 IGF2-ASQ6U949 168 aa6.65□□□□□ -1.35
COL28A1-201ENST00000399429 XAGE1AQ9HD64 81 aa6.65□□□□□ -1.35
COL28A1-201ENST00000399429 NANOS2P60321 138 aaKnown RBP6.64□□□□□ -1.35
COL28A1-201ENST00000399429 TRAV10A0A0B4J240 114 aa6.64□□□□□ -1.35
COL28A1-201ENST00000399429 SPAG11BQ08648 103 aa6.64□□□□□ -1.35
COL28A1-201ENST00000399429 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
COL28A1-201ENST00000399429 LINC01356Q8N9X3 169 aa6.64□□□□□ -1.35
COL28A1-201ENST00000399429 C9orf116Q5BN46 136 aaPredicted RBP6.64□□□□□ -1.35
COL28A1-201ENST00000399429 TACC2O95359 2948 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 IGHV4-30-2A0A087WSY4 118 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 TRBV6-8A0A0A6YYG3 113 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 COX7BP24311 80 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 Q8N9L7 120 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 CHD8Q9HCK8 2581 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 IGLV4-60A0A075B6I1 120 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 SPTBN4Q9H254 2564 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 C19orf84I3L1E1 186 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 ADORA2A-AS1P86434 159 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 FAM30AQ9NZY2 134 aa6.63□□□□□ -1.35
COL28A1-201ENST00000399429 PRYO14603 147 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 NKAPP1Q8N9T2 125 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 C16orf74Q96GX8 76 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 EYSQ5T1H1 3165 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 CFAP47Q6ZTR5 3102 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 ESRGQ1W209 222 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 LINC00959A0A1B0GUT2 108 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 TMEM89A2RUT3 159 aa6.62□□□□□ -1.35
COL28A1-201ENST00000399429 BOD1L1Q8NFC6 3051 aa6.61□□□□□ -1.35
COL28A1-201ENST00000399429 TRBV10-3A0A0K0K1G6 114 aa6.61□□□□□ -1.35
COL28A1-201ENST00000399429 MP68P56378 58 aa6.61□□□□□ -1.35
COL28A1-201ENST00000399429 TM2D3Q9BRN9 247 aa6.61□□□□□ -1.35
COL28A1-201ENST00000399429 IGLV5-45A0A087WSX0 123 aa6.61□□□□□ -1.35
COL28A1-201ENST00000399429 MTORP42345 2549 aa6.61□□□□□ -1.35
COL28A1-201ENST00000399429 IGLV1-40P01703 118 aa6.61□□□□□ -1.35
COL28A1-201ENST00000399429 LINC01600Q96MT4 127 aa6.61□□□□□ -1.35
COL28A1-201ENST00000399429 H3BQ85 93 aa6.6□□□□□ -1.35
COL28A1-201ENST00000399429 C1orf158Q8N1D5 194 aa6.6□□□□□ -1.35
COL28A1-201ENST00000399429 POLQO75417 2590 aa6.6□□□□□ -1.35
COL28A1-201ENST00000399429 LRRK2Q5S007 2527 aa6.6□□□□□ -1.35
COL28A1-201ENST00000399429 CHCHD10Q8WYQ3 142 aaPredicted RBP6.6□□□□□ -1.35
COL28A1-201ENST00000399429 Q5XG85 94 aa6.6□□□□□ -1.35
COL28A1-201ENST00000399429 C11orf71Q6IPW1 123 aa6.6□□□□□ -1.35
COL28A1-201ENST00000399429 Q96MF0 132 aa6.6□□□□□ -1.35
COL28A1-201ENST00000399429 CAMK2N2Q96S95 79 aa6.6□□□□□ -1.35
COL28A1-201ENST00000399429 H7BZZ5 65 aa6.59□□□□□ -1.35
COL28A1-201ENST00000399429 CDSNQ15517 529 aa6.59□□□□□ -1.35
COL28A1-201ENST00000399429 WDFY3Q8IZQ1 3526 aa6.59□□□□□ -1.35
COL28A1-201ENST00000399429 ADGRG4Q8IZF6 3080 aa6.59□□□□□ -1.35
COL28A1-201ENST00000399429 C18orf65Q6ZTR6 163 aa6.59□□□□□ -1.35
COL28A1-201ENST00000399429 C11orf72Q8NBR9 251 aa6.59□□□□□ -1.35
COL28A1-201ENST00000399429 CHKB-CPT1BH3BT56 60 aa6.59□□□□□ -1.36
COL28A1-201ENST00000399429 FBXL19-AS1Q494R0 122 aa6.59□□□□□ -1.36
COL28A1-201ENST00000399429 KLK12Q9UKR0 248 aa6.59□□□□□ -1.36
COL28A1-201ENST00000399429 DEFB4AO15263 64 aa6.58□□□□□ -1.36
COL28A1-201ENST00000399429 OXTP01178 125 aa6.58□□□□□ -1.36
COL28A1-201ENST00000399429 F8WDY8 70 aa6.58□□□□□ -1.36
COL28A1-201ENST00000399429 SPTBN5Q9NRC6 3674 aaKnown RBP6.58□□□□□ -1.36
COL28A1-201ENST00000399429 CCL24O00175 119 aa6.57□□□□□ -1.36
COL28A1-201ENST00000399429 REG3AQ06141 175 aa6.57□□□□□ -1.36
COL28A1-201ENST00000399429 DEFB114Q30KQ6 69 aa6.57□□□□□ -1.36
COL28A1-201ENST00000399429 HIGD2AQ9BW72 106 aa6.57□□□□□ -1.36
COL28A1-201ENST00000399429 F8P00451 2351 aa6.56□□□□□ -1.36
COL28A1-201ENST00000399429 MUC7Q8TAX7 377 aa6.56□□□□□ -1.36
COL28A1-201ENST00000399429 BEAN1Q3B7T3 259 aa6.56□□□□□ -1.36
COL28A1-201ENST00000399429 Q8IZM0 81 aa6.56□□□□□ -1.36
COL28A1-201ENST00000399429 LINC00575Q6W349 94 aa6.56□□□□□ -1.36
COL28A1-201ENST00000399429 DCHS1Q96JQ0 3298 aa6.55□□□□□ -1.36
COL28A1-201ENST00000399429 A6NED7 52 aa6.55□□□□□ -1.36
COL28A1-201ENST00000399429 IL17DQ8TAD2 202 aa6.55□□□□□ -1.36
COL28A1-201ENST00000399429 PSCAO43653 123 aa6.55□□□□□ -1.36
COL28A1-201ENST00000399429 UNQ6190/PRO20217Q6UXQ8 127 aa6.55□□□□□ -1.36
COL28A1-201ENST00000399429 IGHV3OR16-9A0A0B4J2B5 98 aa6.54□□□□□ -1.36
COL28A1-201ENST00000399429 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
COL28A1-201ENST00000399429 DMXL2Q8TDJ6 3036 aa6.54□□□□□ -1.36
COL28A1-201ENST00000399429 CXCL6P80162 114 aa6.54□□□□□ -1.36
COL28A1-201ENST00000399429 WFDC10AQ9H1F0 79 aa6.54□□□□□ -1.36
COL28A1-201ENST00000399429 UBE2BP63146 152 aa6.54□□□□□ -1.36
COL28A1-201ENST00000399429 PRO0255Q9UI72 69 aa6.54□□□□□ -1.36
COL28A1-201ENST00000399429 ETDCA0A1B0GVM5 59 aa6.53□□□□□ -1.36
COL28A1-201ENST00000399429 ZNF73O43830 326 aaPredicted RBP6.53□□□□□ -1.36
COL28A1-201ENST00000399429 KLKP1Q107X0 134 aa6.53□□□□□ -1.36
COL28A1-201ENST00000399429 Q6ZQT0 140 aa6.53□□□□□ -1.36
COL28A1-201ENST00000399429 A0A1W2PPR1 153 aa6.53□□□□□ -1.36
COL28A1-201ENST00000399429 CD164L2Q6UWJ8 174 aa6.53□□□□□ -1.36
COL28A1-201ENST00000399429 SPATA3Q8NHX4 192 aa6.53□□□□□ -1.36
COL28A1-201ENST00000399429 WFDC10BQ8IUB3 73 aa6.53□□□□□ -1.36
COL28A1-201ENST00000399429 WFDC13Q8IUB5 93 aa6.52□□□□□ -1.37
COL28A1-201ENST00000399429 BCE1O60756 84 aa6.52□□□□□ -1.37
COL28A1-201ENST00000399429 PLA2G2AP14555 144 aa6.52□□□□□ -1.37
COL28A1-201ENST00000399429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.52□□□□□ -1.37
COL28A1-201ENST00000399429 FASNP49327 2511 aaKnown RBP6.51□□□□□ -1.37
COL28A1-201ENST00000399429 COL27A1Q8IZC6 1860 aaPredicted RBP6.51□□□□□ -1.37
COL28A1-201ENST00000399429 AVPP01185 164 aa6.51□□□□□ -1.37
COL28A1-201ENST00000399429 COX17Q14061 63 aa6.51□□□□□ -1.37
COL28A1-201ENST00000399429 LINC00482Q8N8I6 264 aa6.51□□□□□ -1.37
COL28A1-201ENST00000399429 CYSRT1A8MQ03 144 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms