RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 CRYBA4P53673 196 aa8.12□□□□□ -1.11
ITSN1-211ENST00000399355 TIRAPP58753 221 aa8.12□□□□□ -1.11
ITSN1-211ENST00000399355 COX7B2Q8TF08 81 aa8.12□□□□□ -1.11
ITSN1-211ENST00000399355 SND1-IT1Q9HBX3 110 aa8.12□□□□□ -1.11
ITSN1-211ENST00000399355 CCL18P55774 89 aa8.11□□□□□ -1.11
ITSN1-211ENST00000399355 ANGP03950 147 aaKnown RBP8.11□□□□□ -1.11
ITSN1-211ENST00000399355 UBE2WQ96B02 151 aa8.11□□□□□ -1.11
ITSN1-211ENST00000399355 CITED1Q99966 193 aa8.11□□□□□ -1.11
ITSN1-211ENST00000399355 LINC00959A0A1B0GUT2 108 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
ITSN1-211ENST00000399355 C10orf25Q5T742 122 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 ATP6V0E2Q8NHE4 81 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 IGHV4-28A0A0C4DH34 117 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 TRBV10-2A0A0K0K1G8 114 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 LST1O00453 97 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 C6orf226Q5I0X4 101 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 TRAV25A0A0B4J276 109 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 TMEM86BQ8N661 226 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 C15orf53Q8NAA6 179 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 C22orf24Q9Y442 160 aa8.1□□□□□ -1.11
ITSN1-211ENST00000399355 TRBV10-1A0A0K0K1A3 114 aa8.09□□□□□ -1.11
ITSN1-211ENST00000399355 SMIM11BQ8TCY0 68 aa8.09□□□□□ -1.11
ITSN1-211ENST00000399355 SMCR5Q8TEV8 140 aa8.09□□□□□ -1.11
ITSN1-211ENST00000399355 DNAH7Q8WXX0 4024 aa8.08□□□□□ -1.12
ITSN1-211ENST00000399355 TRBV6-4A0A1B0GX49 114 aa8.08□□□□□ -1.12
ITSN1-211ENST00000399355 LYRM7Q5U5X0 104 aa8.07□□□□□ -1.12
ITSN1-211ENST00000399355 TGP01266 2768 aa8.07□□□□□ -1.12
ITSN1-211ENST00000399355 NCR3O14931 201 aa8.07□□□□□ -1.12
ITSN1-211ENST00000399355 COX6CP09669 75 aa8.07□□□□□ -1.12
ITSN1-211ENST00000399355 ANAPC13Q9BS18 74 aa8.06□□□□□ -1.12
ITSN1-211ENST00000399355 KLK12Q9UKR0 248 aa8.06□□□□□ -1.12
ITSN1-211ENST00000399355 C14orf132Q9NPU4 83 aa8.06□□□□□ -1.12
ITSN1-211ENST00000399355 LECT2O14960 151 aa8.06□□□□□ -1.12
ITSN1-211ENST00000399355 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
ITSN1-211ENST00000399355 OVOL2Q9BRP0 275 aa8.05□□□□□ -1.12
ITSN1-211ENST00000399355 C16orf95Q9H693 158 aa8.05□□□□□ -1.12
ITSN1-211ENST00000399355 BAALC-AS2P0C853 105 aa8.05□□□□□ -1.12
ITSN1-211ENST00000399355 NHLRC4P0CG21 123 aaPredicted RBP8.05□□□□□ -1.12
ITSN1-211ENST00000399355 SS18L2Q9UHA2 77 aa8.05□□□□□ -1.12
ITSN1-211ENST00000399355 CCDC179H3BU77 68 aa8.04□□□□□ -1.12
ITSN1-211ENST00000399355 UNQ6190/PRO20217Q6UXQ8 127 aa8.04□□□□□ -1.12
ITSN1-211ENST00000399355 CRPP02741 224 aa8.04□□□□□ -1.12
ITSN1-211ENST00000399355 B5MCH6 92 aa8.03□□□□□ -1.12
ITSN1-211ENST00000399355 IGHV4-30-4P0DP06 118 aa8.03□□□□□ -1.12
ITSN1-211ENST00000399355 GAGE2AQ6NT46 116 aa8.03□□□□□ -1.12
ITSN1-211ENST00000399355 COX7A2LO14548 114 aa8.03□□□□□ -1.12
ITSN1-211ENST00000399355 HIGD2BQ4VC39 106 aa8.03□□□□□ -1.12
ITSN1-211ENST00000399355 SNCGO76070 127 aa8.03□□□□□ -1.12
ITSN1-211ENST00000399355 DAD1P61803 113 aa8.03□□□□□ -1.12
ITSN1-211ENST00000399355 SHISA2Q6UWI4 295 aa8.03□□□□□ -1.12
ITSN1-211ENST00000399355 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
ITSN1-211ENST00000399355 CHCHD10Q8WYQ3 142 aaPredicted RBP8.02□□□□□ -1.12
ITSN1-211ENST00000399355 WFDC9Q8NEX5 89 aa8.02□□□□□ -1.13
ITSN1-211ENST00000399355 PRO0255Q9UI72 69 aa8.02□□□□□ -1.13
ITSN1-211ENST00000399355 A0A087WZ39 114 aa8.01□□□□□ -1.13
ITSN1-211ENST00000399355 TEX29Q8N6K0 151 aa8.01□□□□□ -1.13
ITSN1-211ENST00000399355 REG3AQ06141 175 aa8.01□□□□□ -1.13
ITSN1-211ENST00000399355 CYSRT1A8MQ03 144 aa8□□□□□ -1.13
ITSN1-211ENST00000399355 GAGE2BQ13066 116 aa8□□□□□ -1.13
ITSN1-211ENST00000399355 GAGE2EQ4V326 116 aa8□□□□□ -1.13
ITSN1-211ENST00000399355 WFDC10BQ8IUB3 73 aa8□□□□□ -1.13
ITSN1-211ENST00000399355 GAGE2DQ9UEU5 116 aa8□□□□□ -1.13
ITSN1-211ENST00000399355 IGKV3D-7A0A0C4DH55 119 aa7.99□□□□□ -1.13
ITSN1-211ENST00000399355 IFITM1P13164 125 aa7.99□□□□□ -1.13
ITSN1-211ENST00000399355 SMIM20Q8N5G0 67 aa7.99□□□□□ -1.13
ITSN1-211ENST00000399355 A0A087WVE0 104 aa7.99□□□□□ -1.13
ITSN1-211ENST00000399355 MALP21145 153 aa7.99□□□□□ -1.13
ITSN1-211ENST00000399355 KRTAP10-11P60412 298 aa7.99□□□□□ -1.13
ITSN1-211ENST00000399355 Q8NAQ8 132 aa7.99□□□□□ -1.13
ITSN1-211ENST00000399355 DNAH9Q9NYC9 4486 aa7.98□□□□□ -1.13
ITSN1-211ENST00000399355 TIMM17BO60830 172 aa7.98□□□□□ -1.13
ITSN1-211ENST00000399355 NANOS2P60321 138 aaKnown RBP7.98□□□□□ -1.13
ITSN1-211ENST00000399355 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
ITSN1-211ENST00000399355 Q6ZTC4 211 aa7.98□□□□□ -1.13
ITSN1-211ENST00000399355 MRAPQ8TCY5 172 aa7.98□□□□□ -1.13
ITSN1-211ENST00000399355 RPL18AQ02543 176 aaKnown RBP7.96□□□□□ -1.13
ITSN1-211ENST00000399355 SS18Q15532 418 aa7.96□□□□□ -1.13
ITSN1-211ENST00000399355 M0R2N4 97 aa7.96□□□□□ -1.14
ITSN1-211ENST00000399355 NDUFV3P56181 108 aaKnown RBP7.96□□□□□ -1.14
ITSN1-211ENST00000399355 KIAA0087Q14695 138 aa7.96□□□□□ -1.14
ITSN1-211ENST00000399355 C6orf99Q4VX62 202 aa7.95□□□□□ -1.14
ITSN1-211ENST00000399355 FAM236AA0A1B0GUQ0 79 aa7.94□□□□□ -1.14
ITSN1-211ENST00000399355 FAM236BA0A1B0GV22 79 aa7.94□□□□□ -1.14
ITSN1-211ENST00000399355 KIR2DL5BQ8NHK3 375 aa7.94□□□□□ -1.14
ITSN1-211ENST00000399355 H3BT86 120 aa7.94□□□□□ -1.14
ITSN1-211ENST00000399355 DNAL4O96015 105 aa7.94□□□□□ -1.14
ITSN1-211ENST00000399355 CXCL5P42830 114 aa7.93□□□□□ -1.14
ITSN1-211ENST00000399355 HERV-K104P63124 156 aa7.93□□□□□ -1.14
ITSN1-211ENST00000399355 ENHOQ6UWT2 76 aa7.93□□□□□ -1.14
ITSN1-211ENST00000399355 FAM19A3Q7Z5A8 133 aa7.93□□□□□ -1.14
ITSN1-211ENST00000399355 C9orf66Q5T8R8 295 aa7.92□□□□□ -1.14
ITSN1-211ENST00000399355 LINC00846Q9NV44 126 aa7.92□□□□□ -1.14
ITSN1-211ENST00000399355 HUWE1Q7Z6Z7 4374 aaKnown RBP7.92□□□□□ -1.14
ITSN1-211ENST00000399355 SPAG11BQ08648 103 aa7.92□□□□□ -1.14
ITSN1-211ENST00000399355 KLK5Q9Y337 293 aaPredicted RBP7.92□□□□□ -1.14
ITSN1-211ENST00000399355 SCGB1A1P11684 91 aa7.91□□□□□ -1.14
ITSN1-211ENST00000399355 RPL28P46779 137 aaKnown RBP7.91□□□□□ -1.14
ITSN1-211ENST00000399355 CFAP161Q6P656 301 aa7.91□□□□□ -1.14
ITSN1-211ENST00000399355 LINC00612Q8N6U2 182 aa7.91□□□□□ -1.14
ITSN1-211ENST00000399355 IBA57-AS1B1ANH7 110 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms