RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 SPINK6Q6UWN8 80 aa13.14□□□□□ -0.31
RUNX1-204ENST00000399237 FAM19A5Q7Z5A7 132 aaPredicted RBP13.14□□□□□ -0.31
RUNX1-204ENST00000399237 LINC01600Q96MT4 127 aa13.14□□□□□ -0.31
RUNX1-204ENST00000399237 APOC3P02656 99 aa13.13□□□□□ -0.31
RUNX1-204ENST00000399237 G0S2P27469 103 aa13.13□□□□□ -0.31
RUNX1-204ENST00000399237 PAPPA-AS1Q5QFB9 102 aa13.13□□□□□ -0.31
RUNX1-204ENST00000399237 Q8IZM0 81 aa13.13□□□□□ -0.31
RUNX1-204ENST00000399237 NDUFC2-KCTD14E9PQ53 114 aa13.12□□□□□ -0.31
RUNX1-204ENST00000399237 SMIM1B2RUZ4 78 aa13.11□□□□□ -0.31
RUNX1-204ENST00000399237 FA2HQ7L5A8 372 aa13.11□□□□□ -0.31
RUNX1-204ENST00000399237 C18orf32Q8TCD1 76 aa13.11□□□□□ -0.31
RUNX1-204ENST00000399237 IGLV5-45A0A087WSX0 123 aa13.1□□□□□ -0.31
RUNX1-204ENST00000399237 PACRGQ96M98 296 aaPredicted RBP13.1□□□□□ -0.31
RUNX1-204ENST00000399237 CST9LQ9H4G1 147 aa13.1□□□□□ -0.31
RUNX1-204ENST00000399237 GEMIN7Q9H840 131 aaKnown RBP13.1□□□□□ -0.31
RUNX1-204ENST00000399237 TINCRA0A1B0GVN0 87 aa13.09□□□□□ -0.31
RUNX1-204ENST00000399237 PRSS2P07478 247 aa13.09□□□□□ -0.31
RUNX1-204ENST00000399237 SEC11AP67812 179 aa13.09□□□□□ -0.31
RUNX1-204ENST00000399237 LINC00469Q8N7U9 141 aa13.09□□□□□ -0.31
RUNX1-204ENST00000399237 C6orf226Q5I0X4 101 aa13.08□□□□□ -0.32
RUNX1-204ENST00000399237 C1orf137Q5JT78 98 aa13.08□□□□□ -0.32
RUNX1-204ENST00000399237 YPEL4Q96NS1 127 aa13.08□□□□□ -0.32
RUNX1-204ENST00000399237 TRAPPC1Q9Y5R8 145 aa13.08□□□□□ -0.32
RUNX1-204ENST00000399237 LRP2P98164 4655 aa13.08□□□□□ -0.32
RUNX1-204ENST00000399237 CKS1BP61024 79 aa13.07□□□□□ -0.32
RUNX1-204ENST00000399237 SMCO4Q9NRQ5 59 aa13.07□□□□□ -0.32
RUNX1-204ENST00000399237 M0QXV9 152 aa13.06□□□□□ -0.32
RUNX1-204ENST00000399237 KRTAP10-8P60410 259 aa13.06□□□□□ -0.32
RUNX1-204ENST00000399237 PMVKQ15126 192 aa13.05□□□□□ -0.32
RUNX1-204ENST00000399237 PMCHL1Q16048 86 aa13.05□□□□□ -0.32
RUNX1-204ENST00000399237 RNF213Q63HN8 5207 aa13.05□□□□□ -0.32
RUNX1-204ENST00000399237 LINC01549A6NIU2 74 aa13.04□□□□□ -0.32
RUNX1-204ENST00000399237 F8VRH5 84 aa13.04□□□□□ -0.32
RUNX1-204ENST00000399237 SNAPINO95295 136 aa13.04□□□□□ -0.32
RUNX1-204ENST00000399237 SPINK8P0C7L1 97 aa13.04□□□□□ -0.32
RUNX1-204ENST00000399237 SVBPQ8N300 66 aa13.04□□□□□ -0.32
RUNX1-204ENST00000399237 XAGE1AQ9HD64 81 aa13.04□□□□□ -0.32
RUNX1-204ENST00000399237 IGLV7-43P04211 117 aa13.02□□□□□ -0.33
RUNX1-204ENST00000399237 LINC00614P0C842 121 aa13.02□□□□□ -0.33
RUNX1-204ENST00000399237 PDZD11Q5EBL8 140 aa13.02□□□□□ -0.33
RUNX1-204ENST00000399237 REG3GQ6UW15 175 aa13.02□□□□□ -0.33
RUNX1-204ENST00000399237 COX7B2Q8TF08 81 aa13.02□□□□□ -0.33
RUNX1-204ENST00000399237 IGLC3P0DOY3 106 aa13□□□□□ -0.33
RUNX1-204ENST00000399237 HBDP02042 147 aa12.99□□□□□ -0.33
RUNX1-204ENST00000399237 CXCL5P42830 114 aa12.99□□□□□ -0.33
RUNX1-204ENST00000399237 NDUFA5Q16718 116 aa12.99□□□□□ -0.33
RUNX1-204ENST00000399237 ZNF22P17026 224 aaPredicted RBP12.97□□□□□ -0.33
RUNX1-204ENST00000399237 UBE2BP63146 152 aa12.97□□□□□ -0.33
RUNX1-204ENST00000399237 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
RUNX1-204ENST00000399237 CBLN2Q8IUK8 224 aa12.96□□□□□ -0.33
RUNX1-204ENST00000399237 IGLV5-39A0A0G2JS06 123 aa12.95□□□□□ -0.34
RUNX1-204ENST00000399237 NDUFA6P56556 154 aa12.95□□□□□ -0.34
RUNX1-204ENST00000399237 C11orf86A6NJI1 115 aa12.93□□□□□ -0.34
RUNX1-204ENST00000399237 H0Y9J4 135 aa12.93□□□□□ -0.34
RUNX1-204ENST00000399237 RAB5BP61020 215 aa12.92□□□□□ -0.34
RUNX1-204ENST00000399237 H3BRM9 83 aa12.91□□□□□ -0.34
RUNX1-204ENST00000399237 KRTAP1-4P0C5Y4 121 aa12.91□□□□□ -0.34
RUNX1-204ENST00000399237 DIRC1Q969H9 104 aa12.91□□□□□ -0.34
RUNX1-204ENST00000399237 BAGE3Q86Y29 109 aa12.89□□□□□ -0.35
RUNX1-204ENST00000399237 PRR26Q8N8Z3 221 aa12.89□□□□□ -0.35
RUNX1-204ENST00000399237 ATP5LO75964 103 aa12.88□□□□□ -0.35
RUNX1-204ENST00000399237 TP73-AS1Q9UF72 201 aa12.88□□□□□ -0.35
RUNX1-204ENST00000399237 MRPL55Q7Z7F7 128 aaKnown RBP12.87□□□□□ -0.35
RUNX1-204ENST00000399237 SLC7A5P1Q8MH63 180 aa12.87□□□□□ -0.35
RUNX1-204ENST00000399237 SCO1O75880 301 aa12.85□□□□□ -0.35
RUNX1-204ENST00000399237 LINC00310P59036 64 aa12.85□□□□□ -0.35
RUNX1-204ENST00000399237 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
RUNX1-204ENST00000399237 LINC00167Q96N53 147 aa12.85□□□□□ -0.35
RUNX1-204ENST00000399237 IGLV5-37A0A075B6J1 123 aa12.84□□□□□ -0.35
RUNX1-204ENST00000399237 PFN2P35080 140 aa12.84□□□□□ -0.35
RUNX1-204ENST00000399237 LBHQ53QV2 105 aaPredicted RBP12.84□□□□□ -0.35
RUNX1-204ENST00000399237 GAGE10A6NGK3 116 aa12.83□□□□□ -0.36
RUNX1-204ENST00000399237 RPL37AP8A6NKH3 93 aa12.83□□□□□ -0.36
RUNX1-204ENST00000399237 TMEM170BQ5T4T1 132 aa12.83□□□□□ -0.36
RUNX1-204ENST00000399237 FAM19A2Q8N3H0 131 aa12.83□□□□□ -0.36
RUNX1-204ENST00000399237 Q8NDZ9 215 aa12.83□□□□□ -0.36
RUNX1-204ENST00000399237 ZNF625Q96I27 306 aaPredicted RBP12.83□□□□□ -0.36
RUNX1-204ENST00000399237 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
RUNX1-204ENST00000399237 NUPR1O60356 82 aa12.82□□□□□ -0.36
RUNX1-204ENST00000399237 ZNF861PO60384 105 aa12.82□□□□□ -0.36
RUNX1-204ENST00000399237 TRGC2P03986 189 aa12.82□□□□□ -0.36
RUNX1-204ENST00000399237 IFI27L1Q96BM0 104 aa12.81□□□□□ -0.36
RUNX1-204ENST00000399237 ERG28Q9UKR5 140 aa12.81□□□□□ -0.36
RUNX1-204ENST00000399237 TRAV12-1A0A0B4J245 112 aa12.8□□□□□ -0.36
RUNX1-204ENST00000399237 TMEM223A0PJW6 202 aa12.79□□□□□ -0.36
RUNX1-204ENST00000399237 SND1-IT1Q9HBX3 110 aa12.79□□□□□ -0.36
RUNX1-204ENST00000399237 VPREB1P12018 145 aa12.78□□□□□ -0.36
RUNX1-204ENST00000399237 BCE1O60756 84 aa12.77□□□□□ -0.37
RUNX1-204ENST00000399237 LPAP08519 4548 aa12.77□□□□□ -0.37
RUNX1-204ENST00000399237 HSBP1O75506 76 aa12.76□□□□□ -0.37
RUNX1-204ENST00000399237 IGLV1-50A0A075B6I6 118 aa12.75□□□□□ -0.37
RUNX1-204ENST00000399237 SERF1AO75920 110 aa12.75□□□□□ -0.37
RUNX1-204ENST00000399237 KRTAP13-1Q8IUC0 172 aa12.75□□□□□ -0.37
RUNX1-204ENST00000399237 IGKV2-28A0A075B6P5 120 aa12.74□□□□□ -0.37
RUNX1-204ENST00000399237 COLCA2A8K830 154 aa12.74□□□□□ -0.37
RUNX1-204ENST00000399237 IGKV2D-28P01615 120 aa12.74□□□□□ -0.37
RUNX1-204ENST00000399237 NKAPP1Q8N9T2 125 aa12.74□□□□□ -0.37
RUNX1-204ENST00000399237 COX17Q14061 63 aa12.73□□□□□ -0.37
RUNX1-204ENST00000399237 A0A087X002 238 aa12.7□□□□□ -0.38
RUNX1-204ENST00000399237 A0A0U1RRA0 63 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms