RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 C18orf65Q6ZTR6 163 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 C4orf3Q8WVX3 66 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 MAP1AP78559 2803 aaPredicted RBP6.82□□□□□ -1.32
CDH23-203ENST00000398788 H0YGX0 51 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 DEFB114Q30KQ6 69 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 ZFAND2AQ8N6M9 145 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 TRBV7-6A0A0J9YX20 115 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 LY6LH3BQJ8 138 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 Q5XG85 94 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 LY6G6DO95868 133 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 AVPP01185 164 aa6.82□□□□□ -1.32
CDH23-203ENST00000398788 LINC00474Q9P2X8 69 aa6.81□□□□□ -1.32
CDH23-203ENST00000398788 IGKV2-24A0A0C4DH68 120 aa6.81□□□□□ -1.32
CDH23-203ENST00000398788 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
CDH23-203ENST00000398788 KRTAP10-9P60411 292 aa6.81□□□□□ -1.32
CDH23-203ENST00000398788 LINC00269Q8N2A0 174 aa6.81□□□□□ -1.32
CDH23-203ENST00000398788 LINC00467Q9BRT7 94 aa6.8□□□□□ -1.32
CDH23-203ENST00000398788 OXTP01178 125 aa6.8□□□□□ -1.32
CDH23-203ENST00000398788 Q8N2B8 174 aa6.8□□□□□ -1.32
CDH23-203ENST00000398788 A0A096LNI7 61 aa6.8□□□□□ -1.32
CDH23-203ENST00000398788 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
CDH23-203ENST00000398788 BBC3Q96PG8 261 aaPredicted RBP6.8□□□□□ -1.32
CDH23-203ENST00000398788 A0A1W2PPR1 153 aa6.79□□□□□ -1.32
CDH23-203ENST00000398788 PSMG3-AS1Q96PY0 264 aa6.79□□□□□ -1.32
CDH23-203ENST00000398788 BOD1L1Q8NFC6 3051 aa6.79□□□□□ -1.32
CDH23-203ENST00000398788 JMJD7-PLA2G4BH0Y9G9 81 aa6.79□□□□□ -1.32
CDH23-203ENST00000398788 NDUFA1O15239 70 aa6.79□□□□□ -1.32
CDH23-203ENST00000398788 NDUFS5O43920 106 aa6.79□□□□□ -1.32
CDH23-203ENST00000398788 RPL28P46779 137 aaKnown RBP6.79□□□□□ -1.32
CDH23-203ENST00000398788 MED14OSP0DP75 135 aa6.78□□□□□ -1.32
CDH23-203ENST00000398788 COX8CQ7Z4L0 72 aa6.78□□□□□ -1.32
CDH23-203ENST00000398788 FUSP35637 526 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDH23-203ENST00000398788 XAGE1AQ9HD64 81 aa6.78□□□□□ -1.32
CDH23-203ENST00000398788 A0A087WYN8 130 aa6.78□□□□□ -1.32
CDH23-203ENST00000398788 SMR3AQ99954 134 aa6.78□□□□□ -1.32
CDH23-203ENST00000398788 MRPS36P82909 103 aaKnown RBP6.77□□□□□ -1.32
CDH23-203ENST00000398788 ATP5EP2Q5VTU8 51 aa6.77□□□□□ -1.32
CDH23-203ENST00000398788 AMELXQ99217 191 aa6.77□□□□□ -1.32
CDH23-203ENST00000398788 COL27A1Q8IZC6 1860 aaPredicted RBP6.77□□□□□ -1.33
CDH23-203ENST00000398788 SETXQ7Z333 2677 aaKnown RBP6.77□□□□□ -1.33
CDH23-203ENST00000398788 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
CDH23-203ENST00000398788 TRBV10-1A0A0K0K1A3 114 aa6.77□□□□□ -1.33
CDH23-203ENST00000398788 M0QY20 66 aa6.77□□□□□ -1.33
CDH23-203ENST00000398788 FAM218AQ96MZ4 157 aa6.77□□□□□ -1.33
CDH23-203ENST00000398788 A0A087WZ39 114 aa6.77□□□□□ -1.33
CDH23-203ENST00000398788 MIFP14174 115 aa6.76□□□□□ -1.33
CDH23-203ENST00000398788 LINC01006Q8NI28 216 aa6.76□□□□□ -1.33
CDH23-203ENST00000398788 SMIM11BQ8TCY0 68 aa6.76□□□□□ -1.33
CDH23-203ENST00000398788 UBE2D4Q9Y2X8 147 aa6.76□□□□□ -1.33
CDH23-203ENST00000398788 PSPHP1O15172 72 aa6.76□□□□□ -1.33
CDH23-203ENST00000398788 LOC100131303A0A0U1RQF7 123 aa6.75□□□□□ -1.33
CDH23-203ENST00000398788 CCKP06307 115 aa6.75□□□□□ -1.33
CDH23-203ENST00000398788 C11orf45Q8TAV5 145 aa6.75□□□□□ -1.33
CDH23-203ENST00000398788 HIGD2AQ9BW72 106 aa6.75□□□□□ -1.33
CDH23-203ENST00000398788 REG3AQ06141 175 aa6.74□□□□□ -1.33
CDH23-203ENST00000398788 PRR4Q16378 134 aa6.74□□□□□ -1.33
CDH23-203ENST00000398788 MRGPRG-AS1Q2M3A8 158 aa6.74□□□□□ -1.33
CDH23-203ENST00000398788 NREPQ16612 68 aa6.74□□□□□ -1.33
CDH23-203ENST00000398788 NDUFC1O43677 76 aa6.74□□□□□ -1.33
CDH23-203ENST00000398788 Q8N6K4 173 aa6.74□□□□□ -1.33
CDH23-203ENST00000398788 TMEM256-PLSCR3K7ERE1 68 aa6.73□□□□□ -1.33
CDH23-203ENST00000398788 CHCHD10Q8WYQ3 142 aaPredicted RBP6.73□□□□□ -1.33
CDH23-203ENST00000398788 ZNF702PQ9H963 129 aa6.73□□□□□ -1.33
CDH23-203ENST00000398788 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.72□□□□□ -1.33
CDH23-203ENST00000398788 DEFB131BA0A096LNP1 70 aa6.72□□□□□ -1.33
CDH23-203ENST00000398788 UBE2AP49459 152 aa6.72□□□□□ -1.33
CDH23-203ENST00000398788 VPS13CQ709C8 3753 aa6.72□□□□□ -1.33
CDH23-203ENST00000398788 TRBV6-5A0A0K0K1A5 114 aa6.72□□□□□ -1.33
CDH23-203ENST00000398788 OXLD1Q5BKU9 147 aa6.72□□□□□ -1.33
CDH23-203ENST00000398788 DIRC1Q969H9 104 aa6.72□□□□□ -1.33
CDH23-203ENST00000398788 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
CDH23-203ENST00000398788 LITAFQ99732 161 aa6.71□□□□□ -1.34
CDH23-203ENST00000398788 TEP1Q99973 2627 aaKnown RBP6.71□□□□□ -1.34
CDH23-203ENST00000398788 CSMD1Q96PZ7 3565 aa6.7□□□□□ -1.34
CDH23-203ENST00000398788 Q8N3U1 123 aa6.7□□□□□ -1.34
CDH23-203ENST00000398788 NBPF19A0A087WUL8 3843 aa6.7□□□□□ -1.34
CDH23-203ENST00000398788 TRBV6-8A0A0A6YYG3 113 aa6.7□□□□□ -1.34
CDH23-203ENST00000398788 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
CDH23-203ENST00000398788 CFAP46Q8IYW2 2715 aa6.7□□□□□ -1.34
CDH23-203ENST00000398788 ITPR3Q14573 2671 aa6.69□□□□□ -1.34
CDH23-203ENST00000398788 CSMD2Q7Z408 3487 aa6.69□□□□□ -1.34
CDH23-203ENST00000398788 ESRGQ1W209 222 aa6.69□□□□□ -1.34
CDH23-203ENST00000398788 H7BZZ5 65 aa6.68□□□□□ -1.34
CDH23-203ENST00000398788 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.68□□□□□ -1.34
CDH23-203ENST00000398788 SVEP1Q4LDE5 3571 aa6.68□□□□□ -1.34
CDH23-203ENST00000398788 COX6A2Q02221 97 aa6.68□□□□□ -1.34
CDH23-203ENST00000398788 KLLNB2CW77 178 aa6.68□□□□□ -1.34
CDH23-203ENST00000398788 C6orf99Q4VX62 202 aa6.68□□□□□ -1.34
CDH23-203ENST00000398788 MGAQ8IWI9 3026 aa6.67□□□□□ -1.34
CDH23-203ENST00000398788 LINC00337Q8N6G1 96 aa6.67□□□□□ -1.34
CDH23-203ENST00000398788 TRAV10A0A0B4J240 114 aa6.67□□□□□ -1.34
CDH23-203ENST00000398788 IGLV1-40P01703 118 aa6.67□□□□□ -1.34
CDH23-203ENST00000398788 C9orf129Q5T035 196 aaKnown RBP6.67□□□□□ -1.34
CDH23-203ENST00000398788 TMEM254Q8TBM7 123 aa6.67□□□□□ -1.34
CDH23-203ENST00000398788 COX7BP24311 80 aa6.67□□□□□ -1.34
CDH23-203ENST00000398788 ODF3L2Q3SX64 289 aa6.66□□□□□ -1.34
CDH23-203ENST00000398788 IGKV2-28A0A075B6P5 120 aa6.66□□□□□ -1.34
CDH23-203ENST00000398788 IGKV2D-28P01615 120 aa6.66□□□□□ -1.34
CDH23-203ENST00000398788 KIF25-AS1Q9Y6Z4 181 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms