RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 C6orf226Q5I0X4 101 aa8.6□□□□□ -1.03
SNRNP25-203ENST00000397876 PAPPA-AS1Q5QFB9 102 aa8.6□□□□□ -1.03
SNRNP25-203ENST00000397876 FAM19A3Q7Z5A8 133 aa8.6□□□□□ -1.03
SNRNP25-203ENST00000397876 ALKBH7Q9BT30 221 aaPredicted RBP8.6□□□□□ -1.03
SNRNP25-203ENST00000397876 NXT2Q9NPJ8 142 aaKnown RBP8.6□□□□□ -1.03
SNRNP25-203ENST00000397876 IGIPA6NJ69 53 aa8.59□□□□□ -1.03
SNRNP25-203ENST00000397876 CTDSP1Q9GZU7 261 aa8.59□□□□□ -1.03
SNRNP25-203ENST00000397876 LPAP08519 4548 aa8.59□□□□□ -1.03
SNRNP25-203ENST00000397876 G0S2P27469 103 aa8.58□□□□□ -1.04
SNRNP25-203ENST00000397876 LINC00469Q8N7U9 141 aa8.58□□□□□ -1.04
SNRNP25-203ENST00000397876 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
SNRNP25-203ENST00000397876 NUPR1O60356 82 aa8.57□□□□□ -1.04
SNRNP25-203ENST00000397876 LBHQ53QV2 105 aaPredicted RBP8.57□□□□□ -1.04
SNRNP25-203ENST00000397876 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
SNRNP25-203ENST00000397876 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
SNRNP25-203ENST00000397876 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
SNRNP25-203ENST00000397876 F8VRH5 84 aa8.56□□□□□ -1.04
SNRNP25-203ENST00000397876 ZNF861PO60384 105 aa8.56□□□□□ -1.04
SNRNP25-203ENST00000397876 CXCL5P42830 114 aa8.56□□□□□ -1.04
SNRNP25-203ENST00000397876 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
SNRNP25-203ENST00000397876 UQCC3Q6UW78 93 aa8.55□□□□□ -1.04
SNRNP25-203ENST00000397876 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
SNRNP25-203ENST00000397876 CARHSP1Q9Y2V2 147 aaKnown RBP8.55□□□□□ -1.04
SNRNP25-203ENST00000397876 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
SNRNP25-203ENST00000397876 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
SNRNP25-203ENST00000397876 SCO1O75880 301 aa8.52□□□□□ -1.05
SNRNP25-203ENST00000397876 PRR4Q16378 134 aa8.52□□□□□ -1.05
SNRNP25-203ENST00000397876 ERASQ7Z444 233 aa8.52□□□□□ -1.05
SNRNP25-203ENST00000397876 SCGB3A1Q96QR1 104 aa8.52□□□□□ -1.05
SNRNP25-203ENST00000397876 SMIM1B2RUZ4 78 aa8.51□□□□□ -1.05
SNRNP25-203ENST00000397876 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
SNRNP25-203ENST00000397876 KIAA1644Q3SXP7 199 aa8.51□□□□□ -1.05
SNRNP25-203ENST00000397876 LOC105371267A0A1B0GV96 52 aa8.5□□□□□ -1.05
SNRNP25-203ENST00000397876 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
SNRNP25-203ENST00000397876 LINC01549A6NIU2 74 aa8.5□□□□□ -1.05
SNRNP25-203ENST00000397876 BCE1O60756 84 aa8.5□□□□□ -1.05
SNRNP25-203ENST00000397876 PDZD11Q5EBL8 140 aa8.5□□□□□ -1.05
SNRNP25-203ENST00000397876 COX7B2Q8TF08 81 aa8.5□□□□□ -1.05
SNRNP25-203ENST00000397876 TRAV9-1A0A075B6T8 112 aa8.49□□□□□ -1.05
SNRNP25-203ENST00000397876 IGLV5-45A0A087WSX0 123 aa8.48□□□□□ -1.05
SNRNP25-203ENST00000397876 ADCYAP1P18509 176 aa8.48□□□□□ -1.05
SNRNP25-203ENST00000397876 APOC3P02656 99 aa8.47□□□□□ -1.05
SNRNP25-203ENST00000397876 SVBPQ8N300 66 aa8.47□□□□□ -1.05
SNRNP25-203ENST00000397876 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
SNRNP25-203ENST00000397876 GAGE10A6NGK3 116 aa8.46□□□□□ -1.06
SNRNP25-203ENST00000397876 RPL37AP8A6NKH3 93 aa8.46□□□□□ -1.06
SNRNP25-203ENST00000397876 SPINK8P0C7L1 97 aa8.46□□□□□ -1.06
SNRNP25-203ENST00000397876 CRYGAP11844 174 aa8.46□□□□□ -1.06
SNRNP25-203ENST00000397876 S100PP25815 95 aa8.46□□□□□ -1.06
SNRNP25-203ENST00000397876 NKAPP1Q8N9T2 125 aa8.46□□□□□ -1.06
SNRNP25-203ENST00000397876 LINC01546A6NGU7 62 aa8.45□□□□□ -1.06
SNRNP25-203ENST00000397876 TSPAN13O95857 204 aa8.45□□□□□ -1.06
SNRNP25-203ENST00000397876 GNB1LQ9BYB4 327 aa8.45□□□□□ -1.06
SNRNP25-203ENST00000397876 CST9LQ9H4G1 147 aa8.45□□□□□ -1.06
SNRNP25-203ENST00000397876 IGLV5-37A0A075B6J1 123 aa8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 A0A087X002 238 aa8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 TMEM218A2RU14 115 aa8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 H3BRM9 83 aa8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 RAB5BP61020 215 aa8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 PMVKQ15126 192 aa8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 SMCO4Q9NRQ5 59 aa8.44□□□□□ -1.06
SNRNP25-203ENST00000397876 ATP5LO75964 103 aa8.43□□□□□ -1.06
SNRNP25-203ENST00000397876 UBE2AP49459 152 aa8.43□□□□□ -1.06
SNRNP25-203ENST00000397876 COX19Q49B96 90 aa8.43□□□□□ -1.06
SNRNP25-203ENST00000397876 SNAPINO95295 136 aa8.42□□□□□ -1.06
SNRNP25-203ENST00000397876 C10orf91Q5T1B1 145 aa8.41□□□□□ -1.06
SNRNP25-203ENST00000397876 SEC11CQ9BY50 192 aa8.41□□□□□ -1.06
SNRNP25-203ENST00000397876 FABP9Q0Z7S8 132 aa8.4□□□□□ -1.06
SNRNP25-203ENST00000397876 KRTAP13-1Q8IUC0 172 aa8.4□□□□□ -1.06
SNRNP25-203ENST00000397876 IGKV2-28A0A075B6P5 120 aa8.39□□□□□ -1.07
SNRNP25-203ENST00000397876 IGKV2D-28P01615 120 aa8.39□□□□□ -1.07
SNRNP25-203ENST00000397876 IGLC3P0DOY3 106 aa8.39□□□□□ -1.07
SNRNP25-203ENST00000397876 PFN2P35080 140 aa8.39□□□□□ -1.07
SNRNP25-203ENST00000397876 IGLV5-39A0A0G2JS06 123 aa8.38□□□□□ -1.07
SNRNP25-203ENST00000397876 A0A0U1RQV1 116 aa8.38□□□□□ -1.07
SNRNP25-203ENST00000397876 NDUFA6P56556 154 aa8.38□□□□□ -1.07
SNRNP25-203ENST00000397876 FAM229BQ4G0N7 80 aa8.38□□□□□ -1.07
SNRNP25-203ENST00000397876 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
SNRNP25-203ENST00000397876 MUC2Q02817 5179 aa8.38□□□□□ -1.07
SNRNP25-203ENST00000397876 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
SNRNP25-203ENST00000397876 KRTAP13-2Q52LG2 175 aa8.36□□□□□ -1.07
SNRNP25-203ENST00000397876 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
SNRNP25-203ENST00000397876 VPREB1P12018 145 aa8.35□□□□□ -1.07
SNRNP25-203ENST00000397876 PRLHP81277 87 aa8.35□□□□□ -1.07
SNRNP25-203ENST00000397876 RPL24P83731 157 aaKnown RBP8.35□□□□□ -1.07
SNRNP25-203ENST00000397876 COX17Q14061 63 aa8.35□□□□□ -1.07
SNRNP25-203ENST00000397876 FAM19A1Q7Z5A9 133 aa8.35□□□□□ -1.07
SNRNP25-203ENST00000397876 LINC00304Q8N9R0 145 aa8.35□□□□□ -1.07
SNRNP25-203ENST00000397876 SND1-IT1Q9HBX3 110 aa8.35□□□□□ -1.07
SNRNP25-203ENST00000397876 A0A096LNJ9 63 aa8.34□□□□□ -1.07
SNRNP25-203ENST00000397876 IGKV2D-26A0A0A0MRZ7 120 aa8.34□□□□□ -1.07
SNRNP25-203ENST00000397876 HBDP02042 147 aa8.34□□□□□ -1.07
SNRNP25-203ENST00000397876 RHEBQ15382 184 aa8.34□□□□□ -1.07
SNRNP25-203ENST00000397876 TMEM126AQ9H061 195 aa8.34□□□□□ -1.07
SNRNP25-203ENST00000397876 SFTA2Q6UW10 78 aa8.33□□□□□ -1.08
SNRNP25-203ENST00000397876 RPS10P5Q9NQ39 176 aa8.33□□□□□ -1.08
SNRNP25-203ENST00000397876 TMEM238C9JI98 176 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms