RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PDZD2O15018 2839 aa7.33□□□□□ -1.24
CPSF1P1-201ENST00000397477 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
CPSF1P1-201ENST00000397477 BAALC-AS2P0C853 105 aa7.33□□□□□ -1.24
CPSF1P1-201ENST00000397477 PRR3P79522 188 aaKnown RBP7.33□□□□□ -1.24
CPSF1P1-201ENST00000397477 LINC00959A0A1B0GUT2 108 aa7.32□□□□□ -1.24
CPSF1P1-201ENST00000397477 OXLD1Q5BKU9 147 aa7.32□□□□□ -1.24
CPSF1P1-201ENST00000397477 C15orf53Q8NAA6 179 aa7.32□□□□□ -1.24
CPSF1P1-201ENST00000397477 CSNK1G2-AS1Q8NCQ2 148 aa7.32□□□□□ -1.24
CPSF1P1-201ENST00000397477 KLK12Q9UKR0 248 aa7.32□□□□□ -1.24
CPSF1P1-201ENST00000397477 MGAM2Q2M2H8 2515 aa7.32□□□□□ -1.24
CPSF1P1-201ENST00000397477 APOC4P55056 127 aa7.32□□□□□ -1.24
CPSF1P1-201ENST00000397477 NBEAL1Q6ZS30 2694 aa7.32□□□□□ -1.24
CPSF1P1-201ENST00000397477 COL6A5A8TX70 2615 aa7.32□□□□□ -1.24
CPSF1P1-201ENST00000397477 C9orf116Q5BN46 136 aaPredicted RBP7.31□□□□□ -1.24
CPSF1P1-201ENST00000397477 GAGE2AQ6NT46 116 aa7.31□□□□□ -1.24
CPSF1P1-201ENST00000397477 CDIP1Q9H305 208 aa7.31□□□□□ -1.24
CPSF1P1-201ENST00000397477 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
CPSF1P1-201ENST00000397477 SLPIP03973 132 aa7.31□□□□□ -1.24
CPSF1P1-201ENST00000397477 RETNQ9HD89 108 aa7.31□□□□□ -1.24
CPSF1P1-201ENST00000397477 IL17DQ8TAD2 202 aa7.3□□□□□ -1.24
CPSF1P1-201ENST00000397477 OVOL2Q9BRP0 275 aa7.3□□□□□ -1.24
CPSF1P1-201ENST00000397477 LST1O00453 97 aa7.3□□□□□ -1.24
CPSF1P1-201ENST00000397477 CELA1Q9UNI1 258 aa7.3□□□□□ -1.24
CPSF1P1-201ENST00000397477 CSDC2Q9Y534 153 aaKnown RBP7.3□□□□□ -1.24
CPSF1P1-201ENST00000397477 IGLV5-45A0A087WSX0 123 aa7.29□□□□□ -1.24
CPSF1P1-201ENST00000397477 TRAV13-2A0A0B4J235 113 aa7.29□□□□□ -1.24
CPSF1P1-201ENST00000397477 CCL18P55774 89 aa7.29□□□□□ -1.24
CPSF1P1-201ENST00000397477 SBSPONQ8IVN8 264 aa7.29□□□□□ -1.24
CPSF1P1-201ENST00000397477 COX7A2LO14548 114 aa7.29□□□□□ -1.24
CPSF1P1-201ENST00000397477 LECT2O14960 151 aa7.29□□□□□ -1.24
CPSF1P1-201ENST00000397477 TIMM17BO60830 172 aa7.29□□□□□ -1.24
CPSF1P1-201ENST00000397477 X6R8D5 127 aa7.29□□□□□ -1.24
CPSF1P1-201ENST00000397477 CHCHD10Q8WYQ3 142 aaPredicted RBP7.29□□□□□ -1.24
CPSF1P1-201ENST00000397477 SPART-AS1P0CW21 52 aa7.28□□□□□ -1.24
CPSF1P1-201ENST00000397477 REG3AQ06141 175 aa7.28□□□□□ -1.24
CPSF1P1-201ENST00000397477 MRPL23Q16540 153 aaKnown RBP7.28□□□□□ -1.24
CPSF1P1-201ENST00000397477 S100A7L2Q5SY68 101 aa7.28□□□□□ -1.24
CPSF1P1-201ENST00000397477 PRB2P02812 416 aaPredicted RBP7.28□□□□□ -1.24
CPSF1P1-201ENST00000397477 NCR3O14931 201 aa7.28□□□□□ -1.24
CPSF1P1-201ENST00000397477 NDUFV3P56181 108 aaKnown RBP7.28□□□□□ -1.24
CPSF1P1-201ENST00000397477 LINC00337Q8N6G1 96 aa7.28□□□□□ -1.24
CPSF1P1-201ENST00000397477 IGHV3OR16-9A0A0B4J2B5 98 aa7.27□□□□□ -1.25
CPSF1P1-201ENST00000397477 IGHV4-30-4P0DP06 118 aa7.27□□□□□ -1.25
CPSF1P1-201ENST00000397477 SMIM11BQ8TCY0 68 aa7.27□□□□□ -1.25
CPSF1P1-201ENST00000397477 H3BT86 120 aa7.26□□□□□ -1.25
CPSF1P1-201ENST00000397477 MRAPQ8TCY5 172 aa7.26□□□□□ -1.25
CPSF1P1-201ENST00000397477 FAM218AQ96MZ4 157 aa7.26□□□□□ -1.25
CPSF1P1-201ENST00000397477 A0A087WZ39 114 aa7.25□□□□□ -1.25
CPSF1P1-201ENST00000397477 C6orf223Q8N319 242 aa7.25□□□□□ -1.25
CPSF1P1-201ENST00000397477 KIR2DL5BQ8NHK3 375 aa7.25□□□□□ -1.25
CPSF1P1-201ENST00000397477 M0QXV9 152 aa7.25□□□□□ -1.25
CPSF1P1-201ENST00000397477 HIGD2BQ4VC39 106 aa7.25□□□□□ -1.25
CPSF1P1-201ENST00000397477 C14orf132Q9NPU4 83 aa7.24□□□□□ -1.25
CPSF1P1-201ENST00000397477 A0A087WYN8 130 aa7.24□□□□□ -1.25
CPSF1P1-201ENST00000397477 LYRM9A8MSI8 78 aa7.24□□□□□ -1.25
CPSF1P1-201ENST00000397477 SPAG11BQ08648 103 aa7.24□□□□□ -1.25
CPSF1P1-201ENST00000397477 DEFB121Q5J5C9 76 aa7.24□□□□□ -1.25
CPSF1P1-201ENST00000397477 XAGE1AQ9HD64 81 aa7.24□□□□□ -1.25
CPSF1P1-201ENST00000397477 PPDPFQ9H3Y8 114 aa7.24□□□□□ -1.25
CPSF1P1-201ENST00000397477 SMIM9A6NGZ8 99 aa7.23□□□□□ -1.25
CPSF1P1-201ENST00000397477 IBA57-AS1B1ANH7 110 aa7.23□□□□□ -1.25
CPSF1P1-201ENST00000397477 UNQ6190/PRO20217Q6UXQ8 127 aa7.23□□□□□ -1.25
CPSF1P1-201ENST00000397477 AKAP9Q99996 3911 aa7.22□□□□□ -1.25
CPSF1P1-201ENST00000397477 IGKV2-28A0A075B6P5 120 aa7.21□□□□□ -1.25
CPSF1P1-201ENST00000397477 IGKV2D-28P01615 120 aa7.21□□□□□ -1.25
CPSF1P1-201ENST00000397477 RPL18AQ02543 176 aaKnown RBP7.21□□□□□ -1.26
CPSF1P1-201ENST00000397477 TRRAPQ9Y4A5 3859 aa7.21□□□□□ -1.26
CPSF1P1-201ENST00000397477 ZNF561-AS1K7EIQ3 104 aa7.21□□□□□ -1.26
CPSF1P1-201ENST00000397477 C9orf153Q5TBE3 101 aa7.21□□□□□ -1.26
CPSF1P1-201ENST00000397477 CD164L2Q6UWJ8 174 aa7.2□□□□□ -1.26
CPSF1P1-201ENST00000397477 IGKV2D-24A0A075B6R9 120 aa7.19□□□□□ -1.26
CPSF1P1-201ENST00000397477 IGKV3D-7A0A0C4DH55 119 aa7.19□□□□□ -1.26
CPSF1P1-201ENST00000397477 MIFP14174 115 aa7.19□□□□□ -1.26
CPSF1P1-201ENST00000397477 LAMTOR3Q9UHA4 124 aa7.19□□□□□ -1.26
CPSF1P1-201ENST00000397477 NHLRC4P0CG21 123 aaPredicted RBP7.18□□□□□ -1.26
CPSF1P1-201ENST00000397477 C10orf25Q5T742 122 aa7.18□□□□□ -1.26
CPSF1P1-201ENST00000397477 Q6ZTC4 211 aa7.18□□□□□ -1.26
CPSF1P1-201ENST00000397477 FBN1P35555 2871 aaKnown RBP7.18□□□□□ -1.26
CPSF1P1-201ENST00000397477 C6orf99Q4VX62 202 aa7.18□□□□□ -1.26
CPSF1P1-201ENST00000397477 CYSRT1A8MQ03 144 aa7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 TRACP01848 142 aa7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 NANOS2P60321 138 aaKnown RBP7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 KPRPQ5T749 579 aaPredicted RBP7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 WFDC10BQ8IUB3 73 aa7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 Q8IZM0 81 aa7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 CAMK2N2Q96S95 79 aa7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 LOC107984640A0A0U1RRK4 108 aa7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 A0A1B0GUV1 79 aa7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 H0YGX0 51 aa7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 INAFM2P0DMQ5 153 aa7.17□□□□□ -1.26
CPSF1P1-201ENST00000397477 RPL28P46779 137 aaKnown RBP7.16□□□□□ -1.26
CPSF1P1-201ENST00000397477 HIST1H4AP62805 103 aaKnown RBP7.16□□□□□ -1.26
CPSF1P1-201ENST00000397477 Q8NAQ8 132 aa7.16□□□□□ -1.26
CPSF1P1-201ENST00000397477 FAM236AA0A1B0GUQ0 79 aa7.16□□□□□ -1.26
CPSF1P1-201ENST00000397477 FAM236BA0A1B0GV22 79 aa7.16□□□□□ -1.26
CPSF1P1-201ENST00000397477 ORMDL1Q9P0S3 153 aa7.16□□□□□ -1.26
CPSF1P1-201ENST00000397477 A0A0J9YWU9 116 aa7.15□□□□□ -1.27
CPSF1P1-201ENST00000397477 LELP1Q5T871 98 aa7.15□□□□□ -1.27
CPSF1P1-201ENST00000397477 SDIM1Q6ZPB5 146 aa7.14□□□□□ -1.27
CPSF1P1-201ENST00000397477 FAM19A3Q7Z5A8 133 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms