RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 LINC01561Q8N1V8 128 aa12.13□□□□□ -0.47
SREBF1-203ENST00000395751 LIMD2Q9BT23 127 aa12.13□□□□□ -0.47
SREBF1-203ENST00000395751 TLN1Q9Y490 2541 aaKnown RBP12.12□□□□□ -0.47
SREBF1-203ENST00000395751 BBC3Q96PG8 261 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-203ENST00000395751 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
SREBF1-203ENST00000395751 C1orf137Q5JT78 98 aa12.1□□□□□ -0.47
SREBF1-203ENST00000395751 CENPFP49454 3210 aa12.09□□□□□ -0.47
SREBF1-203ENST00000395751 A0A096LNI7 61 aa12.08□□□□□ -0.47
SREBF1-203ENST00000395751 CASC2Q6XLA1 102 aa12.08□□□□□ -0.48
SREBF1-203ENST00000395751 TRAV10A0A0B4J240 114 aa12.08□□□□□ -0.48
SREBF1-203ENST00000395751 MUC6Q6W4X9 2439 aa12.08□□□□□ -0.48
SREBF1-203ENST00000395751 CUL9Q8IWT3 2517 aa12.07□□□□□ -0.48
SREBF1-203ENST00000395751 BRI3O95415 125 aa12.07□□□□□ -0.48
SREBF1-203ENST00000395751 SPATA3Q8NHX4 192 aa12.07□□□□□ -0.48
SREBF1-203ENST00000395751 NAV2Q8IVL1 2488 aa12.07□□□□□ -0.48
SREBF1-203ENST00000395751 hDV103S1A0JD37 113 aa12.07□□□□□ -0.48
SREBF1-203ENST00000395751 FN1P02751 2386 aaKnown RBP12.06□□□□□ -0.48
SREBF1-203ENST00000395751 A8MTW9 85 aa12.06□□□□□ -0.48
SREBF1-203ENST00000395751 TM2D3Q9BRN9 247 aa12.06□□□□□ -0.48
SREBF1-203ENST00000395751 CCDC168Q8NDH2 2452 aa12.06□□□□□ -0.48
SREBF1-203ENST00000395751 B9D2Q9BPU9 175 aa12.06□□□□□ -0.48
SREBF1-203ENST00000395751 Q6YL49 198 aa12.04□□□□□ -0.48
SREBF1-203ENST00000395751 HIVEP2P31629 2446 aa12.04□□□□□ -0.48
SREBF1-203ENST00000395751 Q6ZQT0 140 aa12.04□□□□□ -0.48
SREBF1-203ENST00000395751 KLKP1Q107X0 134 aa12.03□□□□□ -0.48
SREBF1-203ENST00000395751 IGHV3OR16-9A0A0B4J2B5 98 aa12.03□□□□□ -0.48
SREBF1-203ENST00000395751 LINC00474Q9P2X8 69 aa12.03□□□□□ -0.48
SREBF1-203ENST00000395751 IGKV2-24A0A0C4DH68 120 aa12.02□□□□□ -0.49
SREBF1-203ENST00000395751 LELP1Q5T871 98 aa12.02□□□□□ -0.49
SREBF1-203ENST00000395751 LINC00482Q8N8I6 264 aa12.02□□□□□ -0.49
SREBF1-203ENST00000395751 EGFEM1PQ0D2K5 195 aa12.01□□□□□ -0.49
SREBF1-203ENST00000395751 HIVEP3Q5T1R4 2406 aa12.01□□□□□ -0.49
SREBF1-203ENST00000395751 LOC110117498A0A087WWA1 95 aa12.01□□□□□ -0.49
SREBF1-203ENST00000395751 ODF3L2Q3SX64 289 aa12□□□□□ -0.49
SREBF1-203ENST00000395751 SMIM29Q86T20 159 aa12□□□□□ -0.49
SREBF1-203ENST00000395751 LINC01006Q8NI28 216 aa12□□□□□ -0.49
SREBF1-203ENST00000395751 DNAJC9-AS1A6NH13 148 aa12□□□□□ -0.49
SREBF1-203ENST00000395751 C10orf25Q5T742 122 aa11.99□□□□□ -0.49
SREBF1-203ENST00000395751 SETD2Q9BYW2 2564 aaPredicted RBP11.99□□□□□ -0.49
SREBF1-203ENST00000395751 H0Y9P7 68 aa11.99□□□□□ -0.49
SREBF1-203ENST00000395751 HCG22E2RYF7 251 aa11.99□□□□□ -0.49
SREBF1-203ENST00000395751 ABCA2Q9BZC7 2435 aa11.98□□□□□ -0.49
SREBF1-203ENST00000395751 A0A1B0GUV1 79 aa11.98□□□□□ -0.49
SREBF1-203ENST00000395751 USP9XQ93008 2570 aaPredicted RBP11.98□□□□□ -0.49
SREBF1-203ENST00000395751 H7BZZ5 65 aa11.98□□□□□ -0.49
SREBF1-203ENST00000395751 K7ERS5 55 aa11.97□□□□□ -0.49
SREBF1-203ENST00000395751 ZNF702PQ9H963 129 aa11.97□□□□□ -0.49
SREBF1-203ENST00000395751 RPL37AP8A6NKH3 93 aa11.97□□□□□ -0.49
SREBF1-203ENST00000395751 C6orf223Q8N319 242 aa11.97□□□□□ -0.49
SREBF1-203ENST00000395751 C2orf48Q96LS8 159 aa11.96□□□□□ -0.49
SREBF1-203ENST00000395751 DEFB113Q30KQ7 82 aa11.96□□□□□ -0.49
SREBF1-203ENST00000395751 ERC2-IT1O76042 136 aa11.96□□□□□ -0.49
SREBF1-203ENST00000395751 C18orf65Q6ZTR6 163 aa11.95□□□□□ -0.5
SREBF1-203ENST00000395751 CD164Q04900 197 aa11.95□□□□□ -0.5
SREBF1-203ENST00000395751 RAI1Q7Z5J4 1906 aaPredicted RBP11.95□□□□□ -0.5
SREBF1-203ENST00000395751 KPRPQ5T749 579 aaPredicted RBP11.95□□□□□ -0.5
SREBF1-203ENST00000395751 LINC01600Q96MT4 127 aa11.94□□□□□ -0.5
SREBF1-203ENST00000395751 EIF4EBP3O60516 100 aaPredicted RBP11.94□□□□□ -0.5
SREBF1-203ENST00000395751 TLN2Q9Y4G6 2542 aa11.92□□□□□ -0.5
SREBF1-203ENST00000395751 PCOTHQ58A44 107 aa11.92□□□□□ -0.5
SREBF1-203ENST00000395751 Q9UF83 564 aa11.92□□□□□ -0.5
SREBF1-203ENST00000395751 PKD1L2Q7Z442 2459 aa11.92□□□□□ -0.5
SREBF1-203ENST00000395751 C11orf72Q8NBR9 251 aa11.92□□□□□ -0.5
SREBF1-203ENST00000395751 DOPEY1Q5JWR5 2465 aa11.9□□□□□ -0.5
SREBF1-203ENST00000395751 USP9YO00507 2555 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-203ENST00000395751 C1orf64Q8NEQ6 169 aa11.88□□□□□ -0.51
SREBF1-203ENST00000395751 A0A087WSZ3 146 aa11.87□□□□□ -0.51
SREBF1-203ENST00000395751 A0A1B0GW54 56 aa11.87□□□□□ -0.51
SREBF1-203ENST00000395751 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
SREBF1-203ENST00000395751 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.86□□□□□ -0.51
SREBF1-203ENST00000395751 MUC4Q99102 2169 aa11.86□□□□□ -0.51
SREBF1-203ENST00000395751 A8MUN3 132 aa11.86□□□□□ -0.51
SREBF1-203ENST00000395751 DEFB116Q30KQ4 102 aa11.86□□□□□ -0.51
SREBF1-203ENST00000395751 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
SREBF1-203ENST00000395751 PIEZO1Q92508 2521 aa11.85□□□□□ -0.51
SREBF1-203ENST00000395751 IGHV4-30-4P0DP06 118 aa11.84□□□□□ -0.51
SREBF1-203ENST00000395751 IGHV4-31P0DP07 118 aa11.84□□□□□ -0.51
SREBF1-203ENST00000395751 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
SREBF1-203ENST00000395751 C14orf177Q52M58 125 aa11.83□□□□□ -0.52
SREBF1-203ENST00000395751 IGF2RP11717 2491 aa11.82□□□□□ -0.52
SREBF1-203ENST00000395751 AVPP01185 164 aa11.81□□□□□ -0.52
SREBF1-203ENST00000395751 KIAA0087Q14695 138 aa11.81□□□□□ -0.52
SREBF1-203ENST00000395751 C11orf45Q8TAV5 145 aa11.8□□□□□ -0.52
SREBF1-203ENST00000395751 DEFB131BA0A096LNP1 70 aa11.8□□□□□ -0.52
SREBF1-203ENST00000395751 H3BPC8 53 aa11.79□□□□□ -0.52
SREBF1-203ENST00000395751 CYP4F30PQ9H0H9 118 aa11.79□□□□□ -0.52
SREBF1-203ENST00000395751 EP400Q96L91 3159 aa11.78□□□□□ -0.52
SREBF1-203ENST00000395751 SPINK6Q6UWN8 80 aa11.78□□□□□ -0.52
SREBF1-203ENST00000395751 LY6G6DO95868 133 aa11.77□□□□□ -0.52
SREBF1-203ENST00000395751 ELOF1P60002 83 aaKnown RBP11.77□□□□□ -0.53
SREBF1-203ENST00000395751 ABCA12Q86UK0 2595 aa11.77□□□□□ -0.53
SREBF1-203ENST00000395751 SPAG11AQ6PDA7 123 aa11.76□□□□□ -0.53
SREBF1-203ENST00000395751 REG3GQ6UW15 175 aa11.75□□□□□ -0.53
SREBF1-203ENST00000395751 KLK9Q2XQG4 91 aa11.75□□□□□ -0.53
SREBF1-203ENST00000395751 CDSNQ15517 529 aa11.74□□□□□ -0.53
SREBF1-203ENST00000395751 VPREB1P12018 145 aa11.74□□□□□ -0.53
SREBF1-203ENST00000395751 C4orf48Q5BLP8 95 aa11.74□□□□□ -0.53
SREBF1-203ENST00000395751 Q5XG85 94 aa11.74□□□□□ -0.53
SREBF1-203ENST00000395751 PRRC2CQ9Y520 2896 aaKnown RBP11.74□□□□□ -0.53
SREBF1-203ENST00000395751 C9orf129Q5T035 196 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms