RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 TOMM7Q9P0U1 55 aa13.03□□□□□ -0.32
LMNB1-202ENST00000395354 LINC00588Q9Y4M8 146 aa13.03□□□□□ -0.32
LMNB1-202ENST00000395354 A4D1N5 150 aa13.03□□□□□ -0.32
LMNB1-202ENST00000395354 PRSS2P07478 247 aa13.03□□□□□ -0.32
LMNB1-202ENST00000395354 FOXI1Q12951 378 aa13.03□□□□□ -0.32
LMNB1-202ENST00000395354 ENHOQ6UWT2 76 aa13.03□□□□□ -0.32
LMNB1-202ENST00000395354 A0A1W2PPM0 123 aa13.02□□□□□ -0.33
LMNB1-202ENST00000395354 IGHV3-33P01772 117 aa13.02□□□□□ -0.33
LMNB1-202ENST00000395354 CRPP02741 224 aa13.02□□□□□ -0.33
LMNB1-202ENST00000395354 CFC1BP0CG36 223 aa13.02□□□□□ -0.33
LMNB1-202ENST00000395354 CFC1P0CG37 223 aa13.02□□□□□ -0.33
LMNB1-202ENST00000395354 UBE2V1Q13404 147 aa13.02□□□□□ -0.33
LMNB1-202ENST00000395354 LINC01556Q5JQF7 62 aa13.02□□□□□ -0.33
LMNB1-202ENST00000395354 A0A0B4J2C4 111 aa13.01□□□□□ -0.33
LMNB1-202ENST00000395354 MEIG1Q5JSS6 88 aa13.01□□□□□ -0.33
LMNB1-202ENST00000395354 UBE2DNLQ8IWF7 75 aa13.01□□□□□ -0.33
LMNB1-202ENST00000395354 IGLV10-54A0A075B6I4 117 aa13□□□□□ -0.33
LMNB1-202ENST00000395354 C6orf226Q5I0X4 101 aa13□□□□□ -0.33
LMNB1-202ENST00000395354 PLECQ15149 4684 aaKnown RBP13□□□□□ -0.33
LMNB1-202ENST00000395354 APOMO95445 188 aa12.99□□□□□ -0.33
LMNB1-202ENST00000395354 FABP2P12104 132 aa12.99□□□□□ -0.33
LMNB1-202ENST00000395354 MALP21145 153 aa12.99□□□□□ -0.33
LMNB1-202ENST00000395354 GAGE12HA6NDE8 117 aa12.98□□□□□ -0.33
LMNB1-202ENST00000395354 CXCL5P42830 114 aa12.98□□□□□ -0.33
LMNB1-202ENST00000395354 IBA57-AS1B1ANH7 110 aa12.98□□□□□ -0.33
LMNB1-202ENST00000395354 UBE2WQ96B02 151 aa12.98□□□□□ -0.33
LMNB1-202ENST00000395354 PRO1854Q9UHT4 67 aa12.98□□□□□ -0.33
LMNB1-202ENST00000395354 DNAH10OSP0CZ25 163 aa12.97□□□□□ -0.33
LMNB1-202ENST00000395354 GTF2H5Q6ZYL4 71 aa12.97□□□□□ -0.33
LMNB1-202ENST00000395354 LINC00308Q8TCZ7 52 aa12.97□□□□□ -0.33
LMNB1-202ENST00000395354 NAA38Q9BRA0 125 aaKnown RBP12.97□□□□□ -0.33
LMNB1-202ENST00000395354 PGPEP1Q9NXJ5 209 aa12.97□□□□□ -0.33
LMNB1-202ENST00000395354 UPK3BQ9BT76 320 aa12.96□□□□□ -0.33
LMNB1-202ENST00000395354 GAGE10A6NGK3 116 aa12.95□□□□□ -0.34
LMNB1-202ENST00000395354 LY6G6CO95867 125 aa12.95□□□□□ -0.34
LMNB1-202ENST00000395354 KIAA0087Q14695 138 aa12.95□□□□□ -0.34
LMNB1-202ENST00000395354 K7EP34 96 aa12.94□□□□□ -0.34
LMNB1-202ENST00000395354 CFAP161Q6P656 301 aa12.94□□□□□ -0.34
LMNB1-202ENST00000395354 LINC00476Q8WZB0 136 aa12.94□□□□□ -0.34
LMNB1-202ENST00000395354 TSPAN13O95857 204 aa12.94□□□□□ -0.34
LMNB1-202ENST00000395354 CKS1BP61024 79 aa12.94□□□□□ -0.34
LMNB1-202ENST00000395354 DAND5Q8N907 189 aa12.94□□□□□ -0.34
LMNB1-202ENST00000395354 SPCS1Q9Y6A9 102 aa12.93□□□□□ -0.34
LMNB1-202ENST00000395354 EIF4EBP3O60516 100 aaPredicted RBP12.92□□□□□ -0.34
LMNB1-202ENST00000395354 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
LMNB1-202ENST00000395354 NPC2P61916 151 aa12.91□□□□□ -0.34
LMNB1-202ENST00000395354 ERG28Q9UKR5 140 aa12.91□□□□□ -0.34
LMNB1-202ENST00000395354 LINC00158P58513 81 aa12.9□□□□□ -0.34
LMNB1-202ENST00000395354 KRTAP26-1Q6PEX3 210 aa12.9□□□□□ -0.34
LMNB1-202ENST00000395354 LYSTQ99698 3801 aa12.9□□□□□ -0.34
LMNB1-202ENST00000395354 LYRM7Q5U5X0 104 aa12.9□□□□□ -0.35
LMNB1-202ENST00000395354 SOSTDC1Q6X4U4 206 aa12.9□□□□□ -0.35
LMNB1-202ENST00000395354 MIR7-3HGQ8N6C7 128 aa12.9□□□□□ -0.35
LMNB1-202ENST00000395354 SPAG11BQ08648 103 aa12.89□□□□□ -0.35
LMNB1-202ENST00000395354 COX17Q14061 63 aa12.89□□□□□ -0.35
LMNB1-202ENST00000395354 C2orf82Q6UX34 121 aa12.87□□□□□ -0.35
LMNB1-202ENST00000395354 C1orf43Q9BWL3 253 aa12.87□□□□□ -0.35
LMNB1-202ENST00000395354 LCE6AA0A183 80 aa12.86□□□□□ -0.35
LMNB1-202ENST00000395354 PFN2P35080 140 aa12.86□□□□□ -0.35
LMNB1-202ENST00000395354 LOC107984156A0A0G2JMH3 177 aa12.83□□□□□ -0.36
LMNB1-202ENST00000395354 ARL17AQ8IVW1 177 aa12.83□□□□□ -0.36
LMNB1-202ENST00000395354 GVQW2A0A096LPI5 108 aaPredicted RBP12.82□□□□□ -0.36
LMNB1-202ENST00000395354 NTN5Q8WTR8 489 aaPredicted RBP12.82□□□□□ -0.36
LMNB1-202ENST00000395354 VPS13DQ5THJ4 4388 aa12.82□□□□□ -0.36
LMNB1-202ENST00000395354 TRBV20-1A0A075B6N2 111 aa12.81□□□□□ -0.36
LMNB1-202ENST00000395354 TRBV30A0A0K0K1B3 111 aa12.81□□□□□ -0.36
LMNB1-202ENST00000395354 NBDYA0A0U1RRE5 68 aa12.81□□□□□ -0.36
LMNB1-202ENST00000395354 F8WDY8 70 aa12.81□□□□□ -0.36
LMNB1-202ENST00000395354 Q1RN00 199 aa12.81□□□□□ -0.36
LMNB1-202ENST00000395354 SND1-IT1Q9HBX3 110 aa12.81□□□□□ -0.36
LMNB1-202ENST00000395354 IGKV2D-24A0A075B6R9 120 aa12.81□□□□□ -0.36
LMNB1-202ENST00000395354 PSMB2P49721 201 aa12.81□□□□□ -0.36
LMNB1-202ENST00000395354 ALMS1Q8TCU4 4167 aa12.8□□□□□ -0.36
LMNB1-202ENST00000395354 M0R2N4 97 aa12.8□□□□□ -0.36
LMNB1-202ENST00000395354 RPL13AP40429 203 aaKnown RBP12.8□□□□□ -0.36
LMNB1-202ENST00000395354 RMI2Q96E14 147 aa12.8□□□□□ -0.36
LMNB1-202ENST00000395354 TRAV13-2A0A0B4J235 113 aa12.79□□□□□ -0.36
LMNB1-202ENST00000395354 H7C2G1 150 aa12.79□□□□□ -0.36
LMNB1-202ENST00000395354 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
LMNB1-202ENST00000395354 UNQ6190/PRO20217Q6UXQ8 127 aa12.79□□□□□ -0.36
LMNB1-202ENST00000395354 C6orf223Q8N319 242 aa12.79□□□□□ -0.36
LMNB1-202ENST00000395354 ZNF561-AS1K7EIQ3 104 aa12.78□□□□□ -0.36
LMNB1-202ENST00000395354 SCGB1C2P0DMR2 95 aa12.78□□□□□ -0.36
LMNB1-202ENST00000395354 C2orf48Q96LS8 159 aa12.78□□□□□ -0.36
LMNB1-202ENST00000395354 KRTAP1-5Q9BYS1 174 aa12.78□□□□□ -0.36
LMNB1-202ENST00000395354 C15orf56Q8N910 161 aa12.77□□□□□ -0.36
LMNB1-202ENST00000395354 C10orf25Q5T742 122 aa12.77□□□□□ -0.37
LMNB1-202ENST00000395354 COX6CP09669 75 aa12.76□□□□□ -0.37
LMNB1-202ENST00000395354 Q6ZR54 194 aa12.76□□□□□ -0.37
LMNB1-202ENST00000395354 Q9HAA7 133 aa12.76□□□□□ -0.37
LMNB1-202ENST00000395354 DNAH1Q9P2D7 4330 aa12.76□□□□□ -0.37
LMNB1-202ENST00000395354 H3BMG7 143 aa12.75□□□□□ -0.37
LMNB1-202ENST00000395354 TRIAP1O43715 76 aa12.75□□□□□ -0.37
LMNB1-202ENST00000395354 IGKV2-28A0A075B6P5 120 aa12.74□□□□□ -0.37
LMNB1-202ENST00000395354 F8W1H4 67 aa12.74□□□□□ -0.37
LMNB1-202ENST00000395354 NDUFC2O95298 119 aa12.74□□□□□ -0.37
LMNB1-202ENST00000395354 IGKV2D-28P01615 120 aa12.74□□□□□ -0.37
LMNB1-202ENST00000395354 LINC00526Q96FQ7 95 aa12.74□□□□□ -0.37
LMNB1-202ENST00000395354 TCL1BO95988 128 aa12.73□□□□□ -0.37
LMNB1-202ENST00000395354 C9orf116Q5BN46 136 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms