RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 C10orf25Q5T742 122 aa8.67□□□□□ -1.02
VPS26A-203ENST00000395098 RMI2Q96E14 147 aa8.67□□□□□ -1.02
VPS26A-203ENST00000395098 KMT2AQ03164 3969 aa8.67□□□□□ -1.02
VPS26A-203ENST00000395098 C3orf84H3BNL1 204 aa8.67□□□□□ -1.02
VPS26A-203ENST00000395098 M0R143 59 aa8.67□□□□□ -1.02
VPS26A-203ENST00000395098 CKS1BP61024 79 aa8.67□□□□□ -1.02
VPS26A-203ENST00000395098 HERV-K104P63124 156 aa8.67□□□□□ -1.02
VPS26A-203ENST00000395098 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
VPS26A-203ENST00000395098 SPANXB1Q9NS25 103 aaPredicted RBP8.67□□□□□ -1.02
VPS26A-203ENST00000395098 SMIM13P0DJ93 91 aa8.66□□□□□ -1.02
VPS26A-203ENST00000395098 GCSHP23434 173 aa8.66□□□□□ -1.02
VPS26A-203ENST00000395098 UNQ6190/PRO20217Q6UXQ8 127 aa8.66□□□□□ -1.02
VPS26A-203ENST00000395098 LECT2O14960 151 aa8.66□□□□□ -1.02
VPS26A-203ENST00000395098 FXYD2P54710 66 aa8.66□□□□□ -1.02
VPS26A-203ENST00000395098 TTC32Q5I0X7 151 aa8.66□□□□□ -1.02
VPS26A-203ENST00000395098 MEIG1Q5JSS6 88 aa8.66□□□□□ -1.02
VPS26A-203ENST00000395098 CEND1Q8N111 149 aa8.66□□□□□ -1.02
VPS26A-203ENST00000395098 NTN5Q8WTR8 489 aaPredicted RBP8.66□□□□□ -1.02
VPS26A-203ENST00000395098 TMEM238C9JI98 176 aa8.65□□□□□ -1.02
VPS26A-203ENST00000395098 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
VPS26A-203ENST00000395098 LY6G6CO95867 125 aa8.65□□□□□ -1.02
VPS26A-203ENST00000395098 USP17L23D6RBM5 183 aa8.65□□□□□ -1.03
VPS26A-203ENST00000395098 WFDC2Q14508 124 aa8.65□□□□□ -1.03
VPS26A-203ENST00000395098 TAL2Q16559 108 aa8.65□□□□□ -1.03
VPS26A-203ENST00000395098 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.03
VPS26A-203ENST00000395098 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.03
VPS26A-203ENST00000395098 ZNF561-AS1K7EIQ3 104 aa8.64□□□□□ -1.03
VPS26A-203ENST00000395098 TIMM17BO60830 172 aa8.64□□□□□ -1.03
VPS26A-203ENST00000395098 NPC2P61916 151 aa8.64□□□□□ -1.03
VPS26A-203ENST00000395098 TM2D2Q9BX73 214 aa8.64□□□□□ -1.03
VPS26A-203ENST00000395098 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
VPS26A-203ENST00000395098 PFN2P35080 140 aa8.64□□□□□ -1.03
VPS26A-203ENST00000395098 CXCL5P42830 114 aa8.64□□□□□ -1.03
VPS26A-203ENST00000395098 MUSTN1Q8IVN3 82 aa8.63□□□□□ -1.03
VPS26A-203ENST00000395098 SPANXDQ9BXN6 97 aa8.63□□□□□ -1.03
VPS26A-203ENST00000395098 SPANXCQ9NY87 97 aa8.63□□□□□ -1.03
VPS26A-203ENST00000395098 COX11Q9Y6N1 276 aa8.63□□□□□ -1.03
VPS26A-203ENST00000395098 SFTA2Q6UW10 78 aa8.63□□□□□ -1.03
VPS26A-203ENST00000395098 Q6ZR54 194 aa8.63□□□□□ -1.03
VPS26A-203ENST00000395098 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
VPS26A-203ENST00000395098 CIRBPQ14011 172 aaKnown RBP8.62□□□□□ -1.03
VPS26A-203ENST00000395098 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
VPS26A-203ENST00000395098 C6orf48Q9UBA6 75 aa8.62□□□□□ -1.03
VPS26A-203ENST00000395098 SLPIP03973 132 aa8.61□□□□□ -1.03
VPS26A-203ENST00000395098 LINC00158P58513 81 aa8.61□□□□□ -1.03
VPS26A-203ENST00000395098 SOSTDC1Q6X4U4 206 aa8.61□□□□□ -1.03
VPS26A-203ENST00000395098 Q6ZRU5 148 aa8.61□□□□□ -1.03
VPS26A-203ENST00000395098 MIR7-3HGQ8N6C7 128 aa8.61□□□□□ -1.03
VPS26A-203ENST00000395098 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
VPS26A-203ENST00000395098 PSCAO43653 123 aa8.61□□□□□ -1.03
VPS26A-203ENST00000395098 PTTG1IPP53801 180 aa8.6□□□□□ -1.03
VPS26A-203ENST00000395098 LINC00308Q8TCZ7 52 aa8.6□□□□□ -1.03
VPS26A-203ENST00000395098 C2orf48Q96LS8 159 aa8.6□□□□□ -1.03
VPS26A-203ENST00000395098 ALMS1Q8TCU4 4167 aa8.59□□□□□ -1.03
VPS26A-203ENST00000395098 DNAH2Q9P225 4427 aa8.59□□□□□ -1.03
VPS26A-203ENST00000395098 K7ERJ3 54 aa8.59□□□□□ -1.03
VPS26A-203ENST00000395098 Q6ZVH6 145 aa8.59□□□□□ -1.03
VPS26A-203ENST00000395098 A4D1N5 150 aa8.58□□□□□ -1.04
VPS26A-203ENST00000395098 NHP2Q9NX24 153 aaKnown RBP8.58□□□□□ -1.04
VPS26A-203ENST00000395098 HYDINQ4G0P3 5121 aa8.58□□□□□ -1.04
VPS26A-203ENST00000395098 SYCNQ0VAF6 134 aa8.57□□□□□ -1.04
VPS26A-203ENST00000395098 LRCOL1A6NCL2 159 aa8.57□□□□□ -1.04
VPS26A-203ENST00000395098 TRBV30A0A0K0K1B3 111 aa8.56□□□□□ -1.04
VPS26A-203ENST00000395098 IFITM1P13164 125 aa8.56□□□□□ -1.04
VPS26A-203ENST00000395098 COX17Q14061 63 aa8.56□□□□□ -1.04
VPS26A-203ENST00000395098 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
VPS26A-203ENST00000395098 COL5A1-AS1Q5SY13 56 aa8.56□□□□□ -1.04
VPS26A-203ENST00000395098 CFC1BP0CG36 223 aa8.55□□□□□ -1.04
VPS26A-203ENST00000395098 CFC1P0CG37 223 aa8.55□□□□□ -1.04
VPS26A-203ENST00000395098 A6NDN8 102 aa8.55□□□□□ -1.04
VPS26A-203ENST00000395098 DNAH6Q9C0G6 4158 aa8.54□□□□□ -1.04
VPS26A-203ENST00000395098 A0A1B0GWB2 263 aa8.54□□□□□ -1.04
VPS26A-203ENST00000395098 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
VPS26A-203ENST00000395098 F8WDY8 70 aa8.54□□□□□ -1.04
VPS26A-203ENST00000395098 TAX1BP3O14907 124 aa8.54□□□□□ -1.04
VPS26A-203ENST00000395098 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
VPS26A-203ENST00000395098 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
VPS26A-203ENST00000395098 A6NJY4 79 aa8.53□□□□□ -1.04
VPS26A-203ENST00000395098 RAB37Q96AX2 223 aa8.53□□□□□ -1.04
VPS26A-203ENST00000395098 LBHQ53QV2 105 aaPredicted RBP8.53□□□□□ -1.04
VPS26A-203ENST00000395098 C1orf134Q5TEV5 83 aa8.53□□□□□ -1.04
VPS26A-203ENST00000395098 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.52□□□□□ -1.05
VPS26A-203ENST00000395098 Q8NDZ9 215 aa8.52□□□□□ -1.05
VPS26A-203ENST00000395098 Q6ZRP5 223 aa8.51□□□□□ -1.05
VPS26A-203ENST00000395098 XAGE1AQ9HD64 81 aa8.51□□□□□ -1.05
VPS26A-203ENST00000395098 NDUFC2-KCTD14E9PQ53 114 aa8.51□□□□□ -1.05
VPS26A-203ENST00000395098 NAA38Q9BRA0 125 aaKnown RBP8.51□□□□□ -1.05
VPS26A-203ENST00000395098 SACSQ9NZJ4 4579 aa8.5□□□□□ -1.05
VPS26A-203ENST00000395098 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
VPS26A-203ENST00000395098 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
VPS26A-203ENST00000395098 PPDPFQ9H3Y8 114 aa8.5□□□□□ -1.05
VPS26A-203ENST00000395098 A0A087WTM6 91 aa8.5□□□□□ -1.05
VPS26A-203ENST00000395098 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
VPS26A-203ENST00000395098 COPS9Q8WXC6 57 aa8.5□□□□□ -1.05
VPS26A-203ENST00000395098 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
VPS26A-203ENST00000395098 IGKV2-28A0A075B6P5 120 aa8.49□□□□□ -1.05
VPS26A-203ENST00000395098 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.49□□□□□ -1.05
VPS26A-203ENST00000395098 IGKV2D-28P01615 120 aa8.49□□□□□ -1.05
VPS26A-203ENST00000395098 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
VPS26A-203ENST00000395098 RNF151Q2KHN1 245 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms