RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 F8P00451 2351 aa9.7□□□□□ -0.86
SNCA-204ENST00000394989 APOC4P55056 127 aa9.7□□□□□ -0.86
SNCA-204ENST00000394989 A0A096LPF7 62 aa9.69□□□□□ -0.86
SNCA-204ENST00000394989 WIPF1O43516 503 aa9.69□□□□□ -0.86
SNCA-204ENST00000394989 Q6Q795 121 aa9.69□□□□□ -0.86
SNCA-204ENST00000394989 PRIMA1Q86XR5 153 aa9.69□□□□□ -0.86
SNCA-204ENST00000394989 Q8NAQ8 132 aa9.69□□□□□ -0.86
SNCA-204ENST00000394989 CELA1Q9UNI1 258 aa9.69□□□□□ -0.86
SNCA-204ENST00000394989 IGHV3OR16-9A0A0B4J2B5 98 aa9.68□□□□□ -0.86
SNCA-204ENST00000394989 LINC00308Q8TCZ7 52 aa9.68□□□□□ -0.86
SNCA-204ENST00000394989 SOSTDC1Q6X4U4 206 aa9.68□□□□□ -0.86
SNCA-204ENST00000394989 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
SNCA-204ENST00000394989 SMCR5Q8TEV8 140 aa9.67□□□□□ -0.86
SNCA-204ENST00000394989 IGHV4-30-4P0DP06 118 aa9.67□□□□□ -0.86
SNCA-204ENST00000394989 LST1O00453 97 aa9.67□□□□□ -0.86
SNCA-204ENST00000394989 PAX4O43316 350 aa9.66□□□□□ -0.86
SNCA-204ENST00000394989 Q9HAA7 133 aa9.66□□□□□ -0.86
SNCA-204ENST00000394989 GAGE2AQ6NT46 116 aa9.66□□□□□ -0.86
SNCA-204ENST00000394989 LINC00959A0A1B0GUT2 108 aa9.65□□□□□ -0.86
SNCA-204ENST00000394989 H3BT86 120 aa9.65□□□□□ -0.86
SNCA-204ENST00000394989 A0A1B0GUV1 79 aa9.65□□□□□ -0.87
SNCA-204ENST00000394989 COX7B2Q8TF08 81 aa9.65□□□□□ -0.87
SNCA-204ENST00000394989 A0A087WZ39 114 aa9.64□□□□□ -0.87
SNCA-204ENST00000394989 MIFP14174 115 aa9.64□□□□□ -0.87
SNCA-204ENST00000394989 DAD1P61803 113 aa9.64□□□□□ -0.87
SNCA-204ENST00000394989 C5orf38Q86SI9 138 aa9.63□□□□□ -0.87
SNCA-204ENST00000394989 TOMM7Q9P0U1 55 aa9.63□□□□□ -0.87
SNCA-204ENST00000394989 Q8N3U1 123 aa9.63□□□□□ -0.87
SNCA-204ENST00000394989 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
SNCA-204ENST00000394989 CLPSL2Q6UWE3 100 aa9.62□□□□□ -0.87
SNCA-204ENST00000394989 STAB1Q9NY15 2570 aa9.62□□□□□ -0.87
SNCA-204ENST00000394989 IGKV3D-7A0A0C4DH55 119 aa9.61□□□□□ -0.87
SNCA-204ENST00000394989 hADV29S1A0JD25 119 aa9.61□□□□□ -0.87
SNCA-204ENST00000394989 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
SNCA-204ENST00000394989 SDIM1Q6ZPB5 146 aa9.61□□□□□ -0.87
SNCA-204ENST00000394989 DNAH3Q8TD57 4116 aa9.61□□□□□ -0.87
SNCA-204ENST00000394989 ATP5G1P05496 136 aa9.61□□□□□ -0.87
SNCA-204ENST00000394989 XCL1P47992 114 aa9.6□□□□□ -0.87
SNCA-204ENST00000394989 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
SNCA-204ENST00000394989 KRTAP24-1Q3LI83 254 aa9.6□□□□□ -0.87
SNCA-204ENST00000394989 TMEM126AQ9H061 195 aa9.6□□□□□ -0.87
SNCA-204ENST00000394989 C3orf22Q8N5N4 141 aa9.59□□□□□ -0.87
SNCA-204ENST00000394989 SPART-AS1P0CW21 52 aa9.59□□□□□ -0.87
SNCA-204ENST00000394989 TRBV7-7A0A0K0K1E9 115 aa9.58□□□□□ -0.88
SNCA-204ENST00000394989 LINC00269Q8N2A0 174 aa9.58□□□□□ -0.88
SNCA-204ENST00000394989 MIR7-3HGQ8N6C7 128 aa9.58□□□□□ -0.88
SNCA-204ENST00000394989 CYSTM1Q9H1C7 97 aa9.58□□□□□ -0.88
SNCA-204ENST00000394989 A0A087WVE0 104 aa9.58□□□□□ -0.88
SNCA-204ENST00000394989 FAM218AQ96MZ4 157 aa9.58□□□□□ -0.88
SNCA-204ENST00000394989 FAM19A5Q7Z5A7 132 aaPredicted RBP9.57□□□□□ -0.88
SNCA-204ENST00000394989 HTN3P15516 51 aa9.57□□□□□ -0.88
SNCA-204ENST00000394989 SS18Q15532 418 aa9.57□□□□□ -0.88
SNCA-204ENST00000394989 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
SNCA-204ENST00000394989 C11orf68Q9H3H3 251 aaKnown RBP9.55□□□□□ -0.88
SNCA-204ENST00000394989 FAM240AA0A1B0GVK7 77 aa9.55□□□□□ -0.88
SNCA-204ENST00000394989 RETNQ9HD89 108 aa9.55□□□□□ -0.88
SNCA-204ENST00000394989 TENM3Q9P273 2699 aa9.55□□□□□ -0.88
SNCA-204ENST00000394989 LINC01600Q96MT4 127 aa9.55□□□□□ -0.88
SNCA-204ENST00000394989 C14orf132Q9NPU4 83 aa9.55□□□□□ -0.88
SNCA-204ENST00000394989 IGKV2-28A0A075B6P5 120 aa9.54□□□□□ -0.88
SNCA-204ENST00000394989 UQCRQO14949 82 aa9.54□□□□□ -0.88
SNCA-204ENST00000394989 IGKV2D-28P01615 120 aa9.54□□□□□ -0.88
SNCA-204ENST00000394989 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
SNCA-204ENST00000394989 LINC00643Q86TS7 51 aa9.54□□□□□ -0.88
SNCA-204ENST00000394989 MAST4O15021 2626 aa9.54□□□□□ -0.88
SNCA-204ENST00000394989 IBA57-AS1B1ANH7 110 aa9.54□□□□□ -0.88
SNCA-204ENST00000394989 COX7A2LO14548 114 aa9.54□□□□□ -0.88
SNCA-204ENST00000394989 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
SNCA-204ENST00000394989 LINC00158P58513 81 aa9.54□□□□□ -0.88
SNCA-204ENST00000394989 IGLV10-54A0A075B6I4 117 aa9.53□□□□□ -0.88
SNCA-204ENST00000394989 REG3AQ06141 175 aa9.53□□□□□ -0.88
SNCA-204ENST00000394989 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
SNCA-204ENST00000394989 PFN2P35080 140 aa9.53□□□□□ -0.88
SNCA-204ENST00000394989 EGFEM1PQ0D2K5 195 aa9.53□□□□□ -0.88
SNCA-204ENST00000394989 LINC00337Q8N6G1 96 aa9.53□□□□□ -0.88
SNCA-204ENST00000394989 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
SNCA-204ENST00000394989 DSCR8Q96T75 97 aa9.53□□□□□ -0.88
SNCA-204ENST00000394989 A0A1B0GX51 115 aa9.52□□□□□ -0.89
SNCA-204ENST00000394989 CCL18P55774 89 aa9.52□□□□□ -0.89
SNCA-204ENST00000394989 CD164L2Q6UWJ8 174 aa9.52□□□□□ -0.89
SNCA-204ENST00000394989 Q8IZM0 81 aa9.52□□□□□ -0.89
SNCA-204ENST00000394989 SND1-IT1Q9HBX3 110 aa9.52□□□□□ -0.89
SNCA-204ENST00000394989 SLPIP03973 132 aa9.51□□□□□ -0.89
SNCA-204ENST00000394989 KIAA0087Q14695 138 aa9.51□□□□□ -0.89
SNCA-204ENST00000394989 LELP1Q5T871 98 aa9.51□□□□□ -0.89
SNCA-204ENST00000394989 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
SNCA-204ENST00000394989 HIST1H4AP62805 103 aaKnown RBP9.5□□□□□ -0.89
SNCA-204ENST00000394989 DEFB121Q5J5C9 76 aa9.5□□□□□ -0.89
SNCA-204ENST00000394989 LINC00526Q96FQ7 95 aa9.5□□□□□ -0.89
SNCA-204ENST00000394989 DNAL4O96015 105 aa9.5□□□□□ -0.89
SNCA-204ENST00000394989 COX7CP15954 63 aa9.5□□□□□ -0.89
SNCA-204ENST00000394989 J3KT08 172 aa9.49□□□□□ -0.89
SNCA-204ENST00000394989 BAHCC1Q9P281 2608 aa9.49□□□□□ -0.89
SNCA-204ENST00000394989 ACYP1P07311 99 aa9.49□□□□□ -0.89
SNCA-204ENST00000394989 LYPD5Q6UWN5 251 aa9.48□□□□□ -0.89
SNCA-204ENST00000394989 TRAV13-2A0A0B4J235 113 aa9.48□□□□□ -0.89
SNCA-204ENST00000394989 NCR3O14931 201 aa9.47□□□□□ -0.89
SNCA-204ENST00000394989 CRPP02741 224 aa9.47□□□□□ -0.89
SNCA-204ENST00000394989 OR13C6PQ8NH95 151 aa9.47□□□□□ -0.89
SNCA-204ENST00000394989 TRACP01848 142 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms