RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PPDPFQ9H3Y8 114 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 CELA1Q9UNI1 258 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.88□□□□□ -1.63
RTN4-205ENST00000394609 TRBV10-1A0A0K0K1A3 114 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 TRBV6-4A0A1B0GX49 114 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 IGKV2-29A2NJV5 120 aaPredicted RBP4.88□□□□□ -1.63
RTN4-205ENST00000394609 MIFP14174 115 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 MEIG1Q5JSS6 88 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 CEMP1Q6PRD7 247 aaPredicted RBP4.88□□□□□ -1.63
RTN4-205ENST00000394609 C2orf82Q6UX34 121 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 SDIM1Q6ZPB5 146 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 LINC00612Q8N6U2 182 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 PYGO1Q9Y3Y4 419 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 A0A1B0GX51 115 aa4.87□□□□□ -1.63
RTN4-205ENST00000394609 LYRM9A8MSI8 78 aa4.87□□□□□ -1.63
RTN4-205ENST00000394609 LST1O00453 97 aa4.87□□□□□ -1.63
RTN4-205ENST00000394609 ZNF22P17026 224 aaPredicted RBP4.87□□□□□ -1.63
RTN4-205ENST00000394609 CXCL5P42830 114 aa4.87□□□□□ -1.63
RTN4-205ENST00000394609 SFTA2Q6UW10 78 aa4.87□□□□□ -1.63
RTN4-205ENST00000394609 CHCHD7Q9BUK0 85 aa4.87□□□□□ -1.63
RTN4-205ENST00000394609 TEX49A0A1B0GTD5 131 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 A8MZ25 164 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 H7C423 109 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 UQCRQO14949 82 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 TRIAP1O43715 76 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 DAD1P61803 113 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 RNASE13Q5GAN3 156 aaKnown RBP4.86□□□□□ -1.63
RTN4-205ENST00000394609 NTM-AS1Q6ZSK4 140 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 MUSTN1Q8IVN3 82 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 ICOSQ9Y6W8 199 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 CMYA5Q8N3K9 4069 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 ANK2Q01484 3957 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 SPART-AS1P0CW21 52 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 HTN3P15516 51 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
RTN4-205ENST00000394609 Q1RN00 199 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 DAZ4Q86SG3 579 aaKnown RBP4.86□□□□□ -1.63
RTN4-205ENST00000394609 LINC00643Q86TS7 51 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 COPS9Q8WXC6 57 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 LITAFQ99732 161 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 DAZ3Q9NR90 486 aaKnown RBP4.86□□□□□ -1.63
RTN4-205ENST00000394609 TENM3Q9P273 2699 aa4.86□□□□□ -1.63
RTN4-205ENST00000394609 A0A096LPF7 62 aa4.85□□□□□ -1.63
RTN4-205ENST00000394609 LINC00694P0DN24 101 aa4.85□□□□□ -1.63
RTN4-205ENST00000394609 GYPEP15421 78 aa4.85□□□□□ -1.63
RTN4-205ENST00000394609 MRPS36P82909 103 aaKnown RBP4.85□□□□□ -1.63
RTN4-205ENST00000394609 MIAQ16674 131 aa4.85□□□□□ -1.63
RTN4-205ENST00000394609 MRAPQ8TCY5 172 aa4.85□□□□□ -1.63
RTN4-205ENST00000394609 FAM104AQ969W3 186 aa4.85□□□□□ -1.63
RTN4-205ENST00000394609 PRO0255Q9UI72 69 aa4.85□□□□□ -1.63
RTN4-205ENST00000394609 IGLV4-3A0A075B6K6 122 aa4.84□□□□□ -1.63
RTN4-205ENST00000394609 F5H768 121 aa4.84□□□□□ -1.63
RTN4-205ENST00000394609 K7EIL1 84 aa4.84□□□□□ -1.63
RTN4-205ENST00000394609 LINC00526Q96FQ7 95 aa4.84□□□□□ -1.63
RTN4-205ENST00000394609 UBE2D4Q9Y2X8 147 aa4.84□□□□□ -1.63
RTN4-205ENST00000394609 C3orf22Q8N5N4 141 aa4.83□□□□□ -1.64
RTN4-205ENST00000394609 DAND5Q8N907 189 aa4.83□□□□□ -1.64
RTN4-205ENST00000394609 IGHV1-58A0A0C4DH39 117 aa4.83□□□□□ -1.64
RTN4-205ENST00000394609 IGHV3-30-3P0DP02 117 aa4.83□□□□□ -1.64
RTN4-205ENST00000394609 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
RTN4-205ENST00000394609 VSIG2Q96IQ7 327 aa4.83□□□□□ -1.64
RTN4-205ENST00000394609 TIMM21Q9BVV7 248 aa4.83□□□□□ -1.64
RTN4-205ENST00000394609 TRBV6-8A0A0A6YYG3 113 aa4.82□□□□□ -1.64
RTN4-205ENST00000394609 A0A0J9YWU9 116 aa4.82□□□□□ -1.64
RTN4-205ENST00000394609 TINCRA0A1B0GVN0 87 aa4.82□□□□□ -1.64
RTN4-205ENST00000394609 TRACP01848 142 aa4.82□□□□□ -1.64
RTN4-205ENST00000394609 C5orf47Q569G3 176 aa4.82□□□□□ -1.64
RTN4-205ENST00000394609 C5orf38Q86SI9 138 aa4.82□□□□□ -1.64
RTN4-205ENST00000394609 Q8N1X5 172 aa4.82□□□□□ -1.64
RTN4-205ENST00000394609 TMEM243Q9BU79 118 aa4.82□□□□□ -1.64
RTN4-205ENST00000394609 A0A0J9YXV3 536 aa4.81□□□□□ -1.64
RTN4-205ENST00000394609 J3KT08 172 aa4.81□□□□□ -1.64
RTN4-205ENST00000394609 UBE2L6O14933 153 aa4.81□□□□□ -1.64
RTN4-205ENST00000394609 SLPIP03973 132 aa4.81□□□□□ -1.64
RTN4-205ENST00000394609 CRYGAP11844 174 aa4.81□□□□□ -1.64
RTN4-205ENST00000394609 KPRPQ5T749 579 aaPredicted RBP4.81□□□□□ -1.64
RTN4-205ENST00000394609 INAFM2P0DMQ5 153 aa4.81□□□□□ -1.64
RTN4-205ENST00000394609 HIST1H4AP62805 103 aaKnown RBP4.81□□□□□ -1.64
RTN4-205ENST00000394609 Q6ZTC4 211 aa4.81□□□□□ -1.64
RTN4-205ENST00000394609 CHCHD5Q9BSY4 110 aa4.81□□□□□ -1.64
RTN4-205ENST00000394609 NDUFA12Q9UI09 145 aa4.81□□□□□ -1.64
RTN4-205ENST00000394609 DNAH3Q8TD57 4116 aa4.8□□□□□ -1.64
RTN4-205ENST00000394609 FAM236AA0A1B0GUQ0 79 aa4.8□□□□□ -1.64
RTN4-205ENST00000394609 FAM236BA0A1B0GV22 79 aa4.8□□□□□ -1.64
RTN4-205ENST00000394609 H7C2G1 150 aa4.8□□□□□ -1.64
RTN4-205ENST00000394609 ATOX1O00244 68 aa4.8□□□□□ -1.64
RTN4-205ENST00000394609 COX7A2LO14548 114 aa4.8□□□□□ -1.64
RTN4-205ENST00000394609 NANOS2P60321 138 aaKnown RBP4.8□□□□□ -1.64
RTN4-205ENST00000394609 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
RTN4-205ENST00000394609 IGLV5-45A0A087WSX0 123 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 NDUFA1O15239 70 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 COX7CP15954 63 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 CIRBPQ14011 172 aaKnown RBP4.79□□□□□ -1.64
RTN4-205ENST00000394609 C11orf68Q9H3H3 251 aaKnown RBP4.79□□□□□ -1.64
RTN4-205ENST00000394609 CDC42SE2Q9NRR3 84 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 IGLV4-60A0A075B6I1 120 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 IGHV3-64A0A075B6Q5 118 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 TRAV13-1A0A0B4J241 112 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 IGKV3OR2-268A0A0C4DH90 116 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 TIRAPP58753 221 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms