RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 RYR2Q92736 4967 aa7.36□□□□□ -1.23
PDGFD-202ENST00000393158 TRAV12-1A0A0B4J245 112 aa7.36□□□□□ -1.23
PDGFD-202ENST00000393158 TRBV25-1A0A075B6N4 114 aa7.35□□□□□ -1.23
PDGFD-202ENST00000393158 ESRGQ1W209 222 aa7.35□□□□□ -1.23
PDGFD-202ENST00000393158 TIMM21Q9BVV7 248 aa7.35□□□□□ -1.23
PDGFD-202ENST00000393158 CDC42SE2Q9NRR3 84 aa7.35□□□□□ -1.23
PDGFD-202ENST00000393158 hADV29S1A0JD25 119 aa7.35□□□□□ -1.23
PDGFD-202ENST00000393158 LGALS9CQ6DKI2 356 aa7.35□□□□□ -1.23
PDGFD-202ENST00000393158 SMCPP49901 116 aaPredicted RBP7.35□□□□□ -1.23
PDGFD-202ENST00000393158 ATP6V0E2Q8NHE4 81 aa7.35□□□□□ -1.23
PDGFD-202ENST00000393158 DEFB131BA0A096LNP1 70 aa7.34□□□□□ -1.23
PDGFD-202ENST00000393158 TRAV8-4A0A0B4J246 113 aa7.34□□□□□ -1.23
PDGFD-202ENST00000393158 MRPS36P82909 103 aaKnown RBP7.34□□□□□ -1.23
PDGFD-202ENST00000393158 RNASE13Q5GAN3 156 aaKnown RBP7.34□□□□□ -1.23
PDGFD-202ENST00000393158 TMEM126AQ9H061 195 aa7.34□□□□□ -1.23
PDGFD-202ENST00000393158 HIGD1BQ9P298 99 aa7.34□□□□□ -1.23
PDGFD-202ENST00000393158 RYR3Q15413 4870 aa7.34□□□□□ -1.23
PDGFD-202ENST00000393158 E9PLD3 99 aa7.34□□□□□ -1.23
PDGFD-202ENST00000393158 CEND1Q8N111 149 aa7.34□□□□□ -1.23
PDGFD-202ENST00000393158 BRK1Q8WUW1 75 aa7.34□□□□□ -1.23
PDGFD-202ENST00000393158 MRPL35Q9NZE8 188 aaKnown RBP7.34□□□□□ -1.23
PDGFD-202ENST00000393158 DNAH8Q96JB1 4490 aa7.33□□□□□ -1.24
PDGFD-202ENST00000393158 TIRAPP58753 221 aa7.33□□□□□ -1.24
PDGFD-202ENST00000393158 TEN1Q86WV5 123 aa7.33□□□□□ -1.24
PDGFD-202ENST00000393158 TEX49A0A1B0GTD5 131 aa7.33□□□□□ -1.24
PDGFD-202ENST00000393158 COX6A2Q02221 97 aa7.33□□□□□ -1.24
PDGFD-202ENST00000393158 SCGB3A1Q96QR1 104 aa7.33□□□□□ -1.24
PDGFD-202ENST00000393158 C2orf48Q96LS8 159 aa7.32□□□□□ -1.24
PDGFD-202ENST00000393158 A0A1B0GUV1 79 aa7.32□□□□□ -1.24
PDGFD-202ENST00000393158 HTN3P15516 51 aa7.32□□□□□ -1.24
PDGFD-202ENST00000393158 UBE2D1P51668 147 aa7.32□□□□□ -1.24
PDGFD-202ENST00000393158 KRTAP26-1Q6PEX3 210 aa7.32□□□□□ -1.24
PDGFD-202ENST00000393158 TMEM141Q96I45 108 aa7.32□□□□□ -1.24
PDGFD-202ENST00000393158 APLNQ9ULZ1 77 aa7.32□□□□□ -1.24
PDGFD-202ENST00000393158 S100A7L2Q5SY68 101 aa7.31□□□□□ -1.24
PDGFD-202ENST00000393158 IGLV5-45A0A087WSX0 123 aa7.31□□□□□ -1.24
PDGFD-202ENST00000393158 H7C423 109 aa7.31□□□□□ -1.24
PDGFD-202ENST00000393158 WFDC10BQ8IUB3 73 aa7.31□□□□□ -1.24
PDGFD-202ENST00000393158 SPANXA1Q9NS26 97 aa7.31□□□□□ -1.24
PDGFD-202ENST00000393158 C11orf86A6NJI1 115 aa7.31□□□□□ -1.24
PDGFD-202ENST00000393158 LINC00588Q9Y4M8 146 aa7.3□□□□□ -1.24
PDGFD-202ENST00000393158 TRAV10A0A0B4J240 114 aa7.3□□□□□ -1.24
PDGFD-202ENST00000393158 PRR34Q9NV39 138 aa7.3□□□□□ -1.24
PDGFD-202ENST00000393158 ICOSQ9Y6W8 199 aa7.3□□□□□ -1.24
PDGFD-202ENST00000393158 LINC00242Q5T6M2 205 aa7.3□□□□□ -1.24
PDGFD-202ENST00000393158 F8VRH5 84 aa7.29□□□□□ -1.24
PDGFD-202ENST00000393158 LELP1Q5T871 98 aa7.29□□□□□ -1.24
PDGFD-202ENST00000393158 F8WDY8 70 aa7.29□□□□□ -1.24
PDGFD-202ENST00000393158 SLC25A20O43772 301 aa7.29□□□□□ -1.24
PDGFD-202ENST00000393158 TMEM243Q9BU79 118 aa7.29□□□□□ -1.24
PDGFD-202ENST00000393158 PRO0461Q9UI25 63 aa7.29□□□□□ -1.24
PDGFD-202ENST00000393158 TSPEAR-AS2P59090 65 aa7.29□□□□□ -1.24
PDGFD-202ENST00000393158 KRTAP1-5Q9BYS1 174 aa7.29□□□□□ -1.24
PDGFD-202ENST00000393158 TCL1BO95988 128 aa7.28□□□□□ -1.24
PDGFD-202ENST00000393158 MAPKAPK5-AS1Q8N8E1 139 aa7.28□□□□□ -1.24
PDGFD-202ENST00000393158 ENHOQ6UWT2 76 aa7.28□□□□□ -1.24
PDGFD-202ENST00000393158 LINC00336Q6ZUF6 198 aa7.28□□□□□ -1.24
PDGFD-202ENST00000393158 A0A0J9YXV3 536 aa7.27□□□□□ -1.25
PDGFD-202ENST00000393158 ZNF22P17026 224 aaPredicted RBP7.27□□□□□ -1.25
PDGFD-202ENST00000393158 UPK3BQ9BT76 320 aa7.26□□□□□ -1.25
PDGFD-202ENST00000393158 TRAV13-1A0A0B4J241 112 aa7.26□□□□□ -1.25
PDGFD-202ENST00000393158 C1orf195Q5TG92 126 aa7.25□□□□□ -1.25
PDGFD-202ENST00000393158 IGHV3OR16-9A0A0B4J2B5 98 aa7.25□□□□□ -1.25
PDGFD-202ENST00000393158 TRACP01848 142 aa7.25□□□□□ -1.25
PDGFD-202ENST00000393158 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
PDGFD-202ENST00000393158 IGKCP01834 107 aa7.25□□□□□ -1.25
PDGFD-202ENST00000393158 DNAH10OSP0CZ25 163 aa7.24□□□□□ -1.25
PDGFD-202ENST00000393158 LINC00959A0A1B0GUT2 108 aa7.23□□□□□ -1.25
PDGFD-202ENST00000393158 DPM2O94777 84 aa7.23□□□□□ -1.25
PDGFD-202ENST00000393158 CDKN2A-AS1Q9UH64 79 aa7.23□□□□□ -1.25
PDGFD-202ENST00000393158 IGLV5-39A0A0G2JS06 123 aa7.23□□□□□ -1.25
PDGFD-202ENST00000393158 PLNP26678 52 aa7.23□□□□□ -1.25
PDGFD-202ENST00000393158 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
PDGFD-202ENST00000393158 TAL2Q16559 108 aa7.22□□□□□ -1.25
PDGFD-202ENST00000393158 LINC01556Q5JQF7 62 aa7.22□□□□□ -1.25
PDGFD-202ENST00000393158 LINC00269Q8N2A0 174 aa7.22□□□□□ -1.25
PDGFD-202ENST00000393158 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
PDGFD-202ENST00000393158 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
PDGFD-202ENST00000393158 PFN2P35080 140 aa7.22□□□□□ -1.25
PDGFD-202ENST00000393158 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
PDGFD-202ENST00000393158 A0A0U1RRA0 63 aa7.22□□□□□ -1.25
PDGFD-202ENST00000393158 NPC2P61916 151 aa7.22□□□□□ -1.25
PDGFD-202ENST00000393158 SMIM1B2RUZ4 78 aa7.21□□□□□ -1.25
PDGFD-202ENST00000393158 TRAV8-3A0A0A6YYJ7 113 aa7.21□□□□□ -1.26
PDGFD-202ENST00000393158 ZNF815PA8K554 130 aa7.21□□□□□ -1.26
PDGFD-202ENST00000393158 C2orf82Q6UX34 121 aa7.21□□□□□ -1.26
PDGFD-202ENST00000393158 IGHV3-64A0A075B6Q5 118 aa7.2□□□□□ -1.26
PDGFD-202ENST00000393158 PRSS2P07478 247 aa7.2□□□□□ -1.26
PDGFD-202ENST00000393158 CLPSL2Q6UWE3 100 aa7.2□□□□□ -1.26
PDGFD-202ENST00000393158 CYSTM1Q9H1C7 97 aa7.19□□□□□ -1.26
PDGFD-202ENST00000393158 REG3AQ06141 175 aa7.19□□□□□ -1.26
PDGFD-202ENST00000393158 LITAFQ99732 161 aa7.19□□□□□ -1.26
PDGFD-202ENST00000393158 KIAA0087Q14695 138 aa7.18□□□□□ -1.26
PDGFD-202ENST00000393158 CASC10Q5T4H9 136 aa7.18□□□□□ -1.26
PDGFD-202ENST00000393158 UBE2WQ96B02 151 aa7.18□□□□□ -1.26
PDGFD-202ENST00000393158 A0A087WZ39 114 aa7.18□□□□□ -1.26
PDGFD-202ENST00000393158 UBE2L6O14933 153 aa7.18□□□□□ -1.26
PDGFD-202ENST00000393158 IGHV3-30P01768 117 aa7.18□□□□□ -1.26
PDGFD-202ENST00000393158 IGHV3-33P01772 117 aa7.18□□□□□ -1.26
PDGFD-202ENST00000393158 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms