RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SFTA2Q6UW10 78 aa7.77□□□□□ -1.17
SMARCAL1-203ENST00000392128 ENHOQ6UWT2 76 aa7.77□□□□□ -1.17
SMARCAL1-203ENST00000392128 TOMM7Q9P0U1 55 aa7.77□□□□□ -1.17
SMARCAL1-203ENST00000392128 IGLV10-54A0A075B6I4 117 aa7.76□□□□□ -1.17
SMARCAL1-203ENST00000392128 H3BUT2 72 aa7.76□□□□□ -1.17
SMARCAL1-203ENST00000392128 FOXI1Q12951 378 aa7.76□□□□□ -1.17
SMARCAL1-203ENST00000392128 DNAH9Q9NYC9 4486 aa7.76□□□□□ -1.17
SMARCAL1-203ENST00000392128 IFITM1P13164 125 aa7.76□□□□□ -1.17
SMARCAL1-203ENST00000392128 Q8IZM0 81 aa7.76□□□□□ -1.17
SMARCAL1-203ENST00000392128 TRAV8-4A0A0B4J246 113 aa7.75□□□□□ -1.17
SMARCAL1-203ENST00000392128 CRPP02741 224 aa7.75□□□□□ -1.17
SMARCAL1-203ENST00000392128 LINC01556Q5JQF7 62 aa7.75□□□□□ -1.17
SMARCAL1-203ENST00000392128 ANAPC13Q9BS18 74 aa7.75□□□□□ -1.17
SMARCAL1-203ENST00000392128 PRSS2P07478 247 aa7.74□□□□□ -1.17
SMARCAL1-203ENST00000392128 CFC1BP0CG36 223 aa7.74□□□□□ -1.17
SMARCAL1-203ENST00000392128 CFC1P0CG37 223 aa7.74□□□□□ -1.17
SMARCAL1-203ENST00000392128 MEIG1Q5JSS6 88 aa7.74□□□□□ -1.17
SMARCAL1-203ENST00000392128 PPDPFQ9H3Y8 114 aa7.74□□□□□ -1.17
SMARCAL1-203ENST00000392128 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.74□□□□□ -1.17
SMARCAL1-203ENST00000392128 A0A1W2PPM0 123 aa7.74□□□□□ -1.17
SMARCAL1-203ENST00000392128 IGLL5B9A064 214 aa7.74□□□□□ -1.17
SMARCAL1-203ENST00000392128 APOMO95445 188 aa7.73□□□□□ -1.17
SMARCAL1-203ENST00000392128 UBE2WQ96B02 151 aa7.73□□□□□ -1.17
SMARCAL1-203ENST00000392128 NAA38Q9BRA0 125 aaKnown RBP7.73□□□□□ -1.17
SMARCAL1-203ENST00000392128 A0A0B4J2C4 111 aa7.73□□□□□ -1.17
SMARCAL1-203ENST00000392128 NHLRC4P0CG21 123 aaPredicted RBP7.73□□□□□ -1.17
SMARCAL1-203ENST00000392128 MALP21145 153 aa7.73□□□□□ -1.17
SMARCAL1-203ENST00000392128 KRTAP21-3Q3LHN1 58 aa7.73□□□□□ -1.17
SMARCAL1-203ENST00000392128 C6orf226Q5I0X4 101 aa7.73□□□□□ -1.17
SMARCAL1-203ENST00000392128 DNAH10OSP0CZ25 163 aa7.72□□□□□ -1.17
SMARCAL1-203ENST00000392128 DAND5Q8N907 189 aa7.72□□□□□ -1.17
SMARCAL1-203ENST00000392128 COPS9Q8WXC6 57 aa7.72□□□□□ -1.17
SMARCAL1-203ENST00000392128 COL7A1Q02388 2944 aa7.72□□□□□ -1.17
SMARCAL1-203ENST00000392128 KIAA0087Q14695 138 aa7.72□□□□□ -1.17
SMARCAL1-203ENST00000392128 LINC00308Q8TCZ7 52 aa7.72□□□□□ -1.17
SMARCAL1-203ENST00000392128 IBA57-AS1B1ANH7 110 aa7.71□□□□□ -1.17
SMARCAL1-203ENST00000392128 FABP2P12104 132 aa7.71□□□□□ -1.17
SMARCAL1-203ENST00000392128 CXCL5P42830 114 aa7.71□□□□□ -1.17
SMARCAL1-203ENST00000392128 PRO1854Q9UHT4 67 aa7.71□□□□□ -1.17
SMARCAL1-203ENST00000392128 KLK5Q9Y337 293 aaPredicted RBP7.71□□□□□ -1.17
SMARCAL1-203ENST00000392128 LINC00588Q9Y4M8 146 aa7.71□□□□□ -1.17
SMARCAL1-203ENST00000392128 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.18
SMARCAL1-203ENST00000392128 CCL18P55774 89 aa7.71□□□□□ -1.18
SMARCAL1-203ENST00000392128 NPC2P61916 151 aa7.71□□□□□ -1.18
SMARCAL1-203ENST00000392128 A0A0U1RRA0 63 aa7.7□□□□□ -1.18
SMARCAL1-203ENST00000392128 SPCS1Q9Y6A9 102 aa7.7□□□□□ -1.18
SMARCAL1-203ENST00000392128 DNHD1Q96M86 4753 aa7.69□□□□□ -1.18
SMARCAL1-203ENST00000392128 KRTAP26-1Q6PEX3 210 aa7.69□□□□□ -1.18
SMARCAL1-203ENST00000392128 UPK3BQ9BT76 320 aa7.69□□□□□ -1.18
SMARCAL1-203ENST00000392128 TMEM126AQ9H061 195 aa7.69□□□□□ -1.18
SMARCAL1-203ENST00000392128 SOSTDC1Q6X4U4 206 aa7.69□□□□□ -1.18
SMARCAL1-203ENST00000392128 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
SMARCAL1-203ENST00000392128 F8W1H4 67 aa7.68□□□□□ -1.18
SMARCAL1-203ENST00000392128 LINC00158P58513 81 aa7.68□□□□□ -1.18
SMARCAL1-203ENST00000392128 MIR7-3HGQ8N6C7 128 aa7.68□□□□□ -1.18
SMARCAL1-203ENST00000392128 STAB2Q8WWQ8 2551 aa7.67□□□□□ -1.18
SMARCAL1-203ENST00000392128 SPAG11BQ08648 103 aa7.67□□□□□ -1.18
SMARCAL1-203ENST00000392128 PFN2P35080 140 aa7.66□□□□□ -1.18
SMARCAL1-203ENST00000392128 COX17Q14061 63 aa7.66□□□□□ -1.18
SMARCAL1-203ENST00000392128 C1orf43Q9BWL3 253 aa7.66□□□□□ -1.18
SMARCAL1-203ENST00000392128 CDIP1Q9H305 208 aa7.66□□□□□ -1.18
SMARCAL1-203ENST00000392128 LYRM7Q5U5X0 104 aa7.64□□□□□ -1.19
SMARCAL1-203ENST00000392128 APLNQ9ULZ1 77 aa7.64□□□□□ -1.19
SMARCAL1-203ENST00000392128 IGKV2D-24A0A075B6R9 120 aa7.63□□□□□ -1.19
SMARCAL1-203ENST00000392128 C6orf223Q8N319 242 aa7.63□□□□□ -1.19
SMARCAL1-203ENST00000392128 NTN5Q8WTR8 489 aaPredicted RBP7.63□□□□□ -1.19
SMARCAL1-203ENST00000392128 DYNC2H1Q8NCM8 4307 aaKnown RBP7.63□□□□□ -1.19
SMARCAL1-203ENST00000392128 LOC107984156A0A0G2JMH3 177 aa7.63□□□□□ -1.19
SMARCAL1-203ENST00000392128 MT-ATP8P03928 68 aa7.63□□□□□ -1.19
SMARCAL1-203ENST00000392128 ARL17AQ8IVW1 177 aa7.63□□□□□ -1.19
SMARCAL1-203ENST00000392128 GVQW2A0A096LPI5 108 aaPredicted RBP7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 NUPR2A6NF83 97 aa7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 H7C2G1 150 aa7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 Q1RN00 199 aa7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 MUC7Q8TAX7 377 aa7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 SND1-IT1Q9HBX3 110 aa7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 PRKDCP78527 4128 aaKnown RBP7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 RPL13AP40429 203 aaKnown RBP7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 UNQ6190/PRO20217Q6UXQ8 127 aa7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 C15orf56Q8N910 161 aa7.62□□□□□ -1.19
SMARCAL1-203ENST00000392128 TRBV30A0A0K0K1B3 111 aa7.61□□□□□ -1.19
SMARCAL1-203ENST00000392128 LINC00526Q96FQ7 95 aa7.61□□□□□ -1.19
SMARCAL1-203ENST00000392128 Q9HAA7 133 aa7.61□□□□□ -1.19
SMARCAL1-203ENST00000392128 CCDC179H3BU77 68 aa7.61□□□□□ -1.19
SMARCAL1-203ENST00000392128 ZNF561-AS1K7EIQ3 104 aa7.61□□□□□ -1.19
SMARCAL1-203ENST00000392128 PSMB2P49721 201 aa7.61□□□□□ -1.19
SMARCAL1-203ENST00000392128 C9orf116Q5BN46 136 aaPredicted RBP7.6□□□□□ -1.19
SMARCAL1-203ENST00000392128 RMI2Q96E14 147 aa7.6□□□□□ -1.19
SMARCAL1-203ENST00000392128 TRBV20-1A0A075B6N2 111 aa7.6□□□□□ -1.19
SMARCAL1-203ENST00000392128 XGP55808 180 aa7.6□□□□□ -1.19
SMARCAL1-203ENST00000392128 C2orf48Q96LS8 159 aa7.6□□□□□ -1.19
SMARCAL1-203ENST00000392128 IGKV2-28A0A075B6P5 120 aa7.59□□□□□ -1.19
SMARCAL1-203ENST00000392128 TRAV13-2A0A0B4J235 113 aa7.59□□□□□ -1.19
SMARCAL1-203ENST00000392128 TRIAP1O43715 76 aa7.59□□□□□ -1.19
SMARCAL1-203ENST00000392128 IGKV2D-28P01615 120 aa7.59□□□□□ -1.19
SMARCAL1-203ENST00000392128 SCGB1C2P0DMR2 95 aa7.59□□□□□ -1.19
SMARCAL1-203ENST00000392128 HIGD2BQ4VC39 106 aa7.59□□□□□ -1.19
SMARCAL1-203ENST00000392128 MEGF8Q7Z7M0 2845 aa7.59□□□□□ -1.19
SMARCAL1-203ENST00000392128 H3BMG7 143 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms