RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 PRO1854Q9UHT4 67 aa6.9□□□□□ -1.31
LTN1-203ENST00000389195 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
LTN1-203ENST00000389195 MIAQ16674 131 aa6.89□□□□□ -1.31
LTN1-203ENST00000389195 A0A087WZ39 114 aa6.89□□□□□ -1.31
LTN1-203ENST00000389195 TMEM238LA0A1B0GVL6 79 aa6.89□□□□□ -1.31
LTN1-203ENST00000389195 A6NJY4 79 aa6.89□□□□□ -1.31
LTN1-203ENST00000389195 H7C423 109 aa6.89□□□□□ -1.31
LTN1-203ENST00000389195 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
LTN1-203ENST00000389195 LINC00308Q8TCZ7 52 aa6.89□□□□□ -1.31
LTN1-203ENST00000389195 GAGE12HA6NDE8 117 aa6.88□□□□□ -1.31
LTN1-203ENST00000389195 RPL24P83731 157 aaKnown RBP6.88□□□□□ -1.31
LTN1-203ENST00000389195 RNF151Q2KHN1 245 aa6.88□□□□□ -1.31
LTN1-203ENST00000389195 Q9HAA7 133 aa6.88□□□□□ -1.31
LTN1-203ENST00000389195 TCL1BO95988 128 aa6.88□□□□□ -1.31
LTN1-203ENST00000389195 LELP1Q5T871 98 aa6.88□□□□□ -1.31
LTN1-203ENST00000389195 FAM19A3Q7Z5A8 133 aa6.88□□□□□ -1.31
LTN1-203ENST00000389195 MALP21145 153 aa6.87□□□□□ -1.31
LTN1-203ENST00000389195 GTF2H5Q6ZYL4 71 aa6.87□□□□□ -1.31
LTN1-203ENST00000389195 PLECQ15149 4684 aaKnown RBP6.87□□□□□ -1.31
LTN1-203ENST00000389195 HIGD2BQ4VC39 106 aa6.87□□□□□ -1.31
LTN1-203ENST00000389195 CLEC2BQ92478 149 aa6.86□□□□□ -1.31
LTN1-203ENST00000389195 SMAGPQ0VAQ4 97 aa6.86□□□□□ -1.31
LTN1-203ENST00000389195 ERG28Q9UKR5 140 aa6.86□□□□□ -1.31
LTN1-203ENST00000389195 TRIAP1O43715 76 aa6.85□□□□□ -1.31
LTN1-203ENST00000389195 FOXI1Q12951 378 aa6.85□□□□□ -1.31
LTN1-203ENST00000389195 CIRBPQ14011 172 aaKnown RBP6.85□□□□□ -1.31
LTN1-203ENST00000389195 ETDBQ3ZM63 59 aa6.85□□□□□ -1.31
LTN1-203ENST00000389195 UNQ6190/PRO20217Q6UXQ8 127 aa6.85□□□□□ -1.31
LTN1-203ENST00000389195 COX7A2LO14548 114 aa6.85□□□□□ -1.31
LTN1-203ENST00000389195 RPL13AP40429 203 aaKnown RBP6.85□□□□□ -1.31
LTN1-203ENST00000389195 SPANXDQ9BXN6 97 aa6.85□□□□□ -1.31
LTN1-203ENST00000389195 SPANXCQ9NY87 97 aa6.85□□□□□ -1.31
LTN1-203ENST00000389195 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
LTN1-203ENST00000389195 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
LTN1-203ENST00000389195 TM2D3Q9BRN9 247 aa6.84□□□□□ -1.31
LTN1-203ENST00000389195 LECT2O14960 151 aa6.84□□□□□ -1.32
LTN1-203ENST00000389195 SMCPP49901 116 aaPredicted RBP6.84□□□□□ -1.32
LTN1-203ENST00000389195 CKS1BP61024 79 aa6.84□□□□□ -1.32
LTN1-203ENST00000389195 KIAA0087Q14695 138 aa6.84□□□□□ -1.32
LTN1-203ENST00000389195 SPATA25Q9BR10 227 aa6.84□□□□□ -1.32
LTN1-203ENST00000389195 DNAH1Q9P2D7 4330 aa6.83□□□□□ -1.32
LTN1-203ENST00000389195 CCL18P55774 89 aa6.83□□□□□ -1.32
LTN1-203ENST00000389195 CASC10Q5T4H9 136 aa6.83□□□□□ -1.32
LTN1-203ENST00000389195 Q8NDZ9 215 aa6.83□□□□□ -1.32
LTN1-203ENST00000389195 TEX48A0A1B0GUV7 120 aa6.82□□□□□ -1.32
LTN1-203ENST00000389195 CRPP02741 224 aa6.82□□□□□ -1.32
LTN1-203ENST00000389195 LINC00337Q8N6G1 96 aa6.82□□□□□ -1.32
LTN1-203ENST00000389195 IGKV2-28A0A075B6P5 120 aa6.82□□□□□ -1.32
LTN1-203ENST00000389195 IGKV2D-28P01615 120 aa6.82□□□□□ -1.32
LTN1-203ENST00000389195 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
LTN1-203ENST00000389195 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
LTN1-203ENST00000389195 OCIAD2Q56VL3 154 aa6.81□□□□□ -1.32
LTN1-203ENST00000389195 SND1-IT1Q9HBX3 110 aa6.81□□□□□ -1.32
LTN1-203ENST00000389195 A0A0B4J2C4 111 aa6.81□□□□□ -1.32
LTN1-203ENST00000389195 XAGE1AQ9HD64 81 aa6.81□□□□□ -1.32
LTN1-203ENST00000389195 PRO0461Q9UI25 63 aa6.81□□□□□ -1.32
LTN1-203ENST00000389195 KMT2AQ03164 3969 aa6.81□□□□□ -1.32
LTN1-203ENST00000389195 FBN3Q75N90 2809 aa6.8□□□□□ -1.32
LTN1-203ENST00000389195 PRR34Q9NV39 138 aa6.8□□□□□ -1.32
LTN1-203ENST00000389195 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.8□□□□□ -1.32
LTN1-203ENST00000389195 C9JAW5 83 aa6.8□□□□□ -1.32
LTN1-203ENST00000389195 SPAG11BQ08648 103 aa6.8□□□□□ -1.32
LTN1-203ENST00000389195 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
LTN1-203ENST00000389195 OR13C6PQ8NH95 151 aa6.8□□□□□ -1.32
LTN1-203ENST00000389195 TIMM17BO60830 172 aa6.78□□□□□ -1.32
LTN1-203ENST00000389195 HERV-K104P63124 156 aa6.78□□□□□ -1.32
LTN1-203ENST00000389195 A0A1B0GV72 72 aa6.78□□□□□ -1.32
LTN1-203ENST00000389195 Q8IZM0 81 aa6.78□□□□□ -1.32
LTN1-203ENST00000389195 NCR3O14931 201 aa6.78□□□□□ -1.32
LTN1-203ENST00000389195 FAM218AQ96MZ4 157 aa6.78□□□□□ -1.32
LTN1-203ENST00000389195 TRAV10A0A0B4J240 114 aa6.77□□□□□ -1.33
LTN1-203ENST00000389195 IBA57-AS1B1ANH7 110 aa6.76□□□□□ -1.33
LTN1-203ENST00000389195 IFITM1P13164 125 aa6.76□□□□□ -1.33
LTN1-203ENST00000389195 KRTAP26-1Q6PEX3 210 aa6.76□□□□□ -1.33
LTN1-203ENST00000389195 GAGE2EQ4V326 116 aa6.75□□□□□ -1.33
LTN1-203ENST00000389195 KRTAP1-5Q9BYS1 174 aa6.75□□□□□ -1.33
LTN1-203ENST00000389195 C6orf48Q9UBA6 75 aa6.75□□□□□ -1.33
LTN1-203ENST00000389195 GAGE2DQ9UEU5 116 aa6.75□□□□□ -1.33
LTN1-203ENST00000389195 SRRM2Q9UQ35 2752 aaKnown RBP6.75□□□□□ -1.33
LTN1-203ENST00000389195 TRAV8-4A0A0B4J246 113 aa6.75□□□□□ -1.33
LTN1-203ENST00000389195 C15orf56Q8N910 161 aa6.75□□□□□ -1.33
LTN1-203ENST00000389195 SMIM11BQ8TCY0 68 aa6.75□□□□□ -1.33
LTN1-203ENST00000389195 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
LTN1-203ENST00000389195 F8W1H4 67 aa6.74□□□□□ -1.33
LTN1-203ENST00000389195 H3BNG1 76 aa6.74□□□□□ -1.33
LTN1-203ENST00000389195 Q6ZRU5 148 aa6.74□□□□□ -1.33
LTN1-203ENST00000389195 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
LTN1-203ENST00000389195 VPS25Q9BRG1 176 aa6.74□□□□□ -1.33
LTN1-203ENST00000389195 TRBV30A0A0K0K1B3 111 aa6.73□□□□□ -1.33
LTN1-203ENST00000389195 SLC25A20O43772 301 aa6.73□□□□□ -1.33
LTN1-203ENST00000389195 SLPIP03973 132 aa6.73□□□□□ -1.33
LTN1-203ENST00000389195 TEX49A0A1B0GTD5 131 aa6.73□□□□□ -1.33
LTN1-203ENST00000389195 ANKRD29Q8N6D5 301 aa6.73□□□□□ -1.33
LTN1-203ENST00000389195 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
LTN1-203ENST00000389195 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
LTN1-203ENST00000389195 CARD19Q96LW7 228 aa6.72□□□□□ -1.33
LTN1-203ENST00000389195 FUSP35637 526 aaKnown RBP eCLIP6.72□□□□□ -1.33
LTN1-203ENST00000389195 LINC01556Q5JQF7 62 aa6.72□□□□□ -1.33
LTN1-203ENST00000389195 KLK5Q9Y337 293 aaPredicted RBP6.72□□□□□ -1.33
LTN1-203ENST00000389195 A0A087WYN8 130 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms